==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT(HEME PROTEIN) 26-SEP-94 1CIE . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR T.P.LO,G.D.BRAYER . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6438.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 58.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A T 0 0 118 0, 0.0 3,-0.1 0, 0.0 66,-0.0 0.000 360.0 360.0 360.0-164.9 4.9 11.7 -7.3 2 -4 A E + 0 0 179 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.049 360.0 85.5-141.1 9.8 1.3 11.8 -6.2 3 -3 A F - 0 0 15 93,-0.0 2,-0.4 94,-0.0 64,-0.1 -0.950 66.7-158.5-114.2 133.7 1.8 15.4 -5.1 4 -2 A K - 0 0 151 -2,-0.4 97,-0.2 89,-0.2 -2,-0.0 -0.974 27.9-102.5-124.0 134.2 1.4 18.1 -7.8 5 -1 A A + 0 0 80 -2,-0.4 93,-0.2 1,-0.1 2,-0.1 -0.272 46.8 178.4 -59.9 136.9 3.0 21.6 -7.6 6 1 A G - 0 0 31 91,-0.7 2,-0.6 92,-0.1 92,-0.1 -0.118 43.0 -47.0-112.2-154.5 0.4 24.2 -6.6 7 2 A S > - 0 0 47 1,-0.2 4,-2.6 -2,-0.1 95,-0.3 -0.854 36.9-161.1 -92.6 112.8 0.6 27.9 -5.9 8 3 A A H > S+ 0 0 24 -2,-0.6 4,-2.0 2,-0.2 -1,-0.2 0.785 97.3 51.7 -64.1 -29.5 3.5 28.8 -3.7 9 4 A K H > S+ 0 0 176 2,-0.2 4,-1.4 1,-0.2 -1,-0.2 0.898 110.3 46.3 -72.1 -40.2 1.6 32.0 -3.0 10 5 A K H > S+ 0 0 103 1,-0.2 4,-1.9 2,-0.2 -2,-0.2 0.921 112.6 51.7 -66.8 -41.3 -1.6 30.2 -2.1 11 6 A G H X S+ 0 0 0 -4,-2.6 4,-2.7 87,-0.4 -2,-0.2 0.849 102.9 59.3 -63.7 -38.1 0.5 27.9 0.1 12 7 A A H X S+ 0 0 18 -4,-2.0 4,-2.1 1,-0.2 -1,-0.2 0.847 109.8 42.5 -58.9 -41.7 2.2 30.8 1.9 13 8 A T H X S+ 0 0 74 -4,-1.4 4,-2.0 2,-0.2 -1,-0.2 0.812 111.0 54.1 -76.3 -32.3 -1.2 32.1 3.0 14 9 A L H X S+ 0 0 21 -4,-1.9 4,-2.1 2,-0.2 5,-0.4 0.916 109.8 50.8 -65.5 -41.2 -2.4 28.6 4.0 15 10 A F H X>S+ 0 0 3 -4,-2.7 4,-3.1 1,-0.2 5,-2.3 0.947 110.4 47.5 -56.8 -52.3 0.8 28.4 6.1 16 11 A K H <5S+ 0 0 126 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.904 118.7 40.5 -59.3 -38.0 0.1 31.7 7.8 17 12 A T H <5S+ 0 0 109 -4,-2.0 -1,-0.2 1,-0.1 -2,-0.2 0.674 131.9 20.6 -86.8 -21.7 -3.6 30.7 8.5 18 13 A R H <5S+ 0 0 111 -4,-2.1 -3,-0.2 -3,-0.2 -2,-0.2 0.517 131.8 26.8-120.9 -22.5 -3.0 27.0 9.5 19 14 A C T >X5S+ 0 0 20 -4,-3.1 3,-1.3 -5,-0.4 4,-0.9 0.732 98.7 75.0-116.0 -36.5 0.6 26.4 10.5 20 15 A L T 34 S- 0 0 90 1,-0.1 3,-2.6 12,-0.1 12,-0.4 -0.300 82.2-100.8 -70.1 148.7 12.7 30.4 8.4 27 22 A K T 3 S+ 0 0 169 1,-0.3 -1,-0.1 79,-0.2 -2,-0.1 -0.474 116.6 22.5 -61.6 131.3 16.2 29.3 9.0 28 23 A G T 3 S+ 0 0 80 1,-0.3 -1,-0.3 -2,-0.1 -2,-0.1 0.463 92.3 139.3 87.5 -3.7 17.0 30.5 12.5 29 24 A G < - 0 0 13 -3,-2.6 -1,-0.3 1,-0.1 7,-0.2 -0.429 52.8-111.7 -72.7 151.0 13.3 30.6 13.4 30 25 A P - 0 0 77 0, 0.0 -6,-0.3 0, 0.0 2,-0.2 -0.410 19.5-106.6 -85.6 160.1 12.5 29.3 16.9 31 26 A H + 0 0 63 4,-0.1 2,-0.2 -2,-0.1 -8,-0.1 -0.564 45.3 167.1 -74.6 147.9 10.6 26.3 18.1 32 27 A K S S- 0 0 86 2,-2.9 -10,-0.1 -10,-0.5 -9,-0.1 -0.237 71.0 -36.2-133.4-135.4 7.2 27.3 19.4 33 28 A V S S+ 0 0 105 -12,-0.3 -10,-0.1 -2,-0.2 -11,-0.1 0.852 142.9 33.1 -57.6 -40.6 4.4 24.8 20.2 34 29 A G S S- 0 0 5 -12,-2.4 -2,-2.9 -13,-0.1 -10,-0.2 -0.777 104.4 -91.0-111.5 161.2 5.7 22.9 17.1 35 30 A P - 0 0 16 0, 0.0 -11,-0.2 0, 0.0 -4,-0.1 -0.381 46.1 -93.1 -73.7 156.9 9.4 22.8 15.9 36 31 A N - 0 0 17 -7,-0.2 -11,-0.2 -13,-0.2 -5,-0.1 -0.443 35.1-148.8 -62.8 141.4 10.9 25.2 13.4 37 32 A L > + 0 0 22 -13,-3.0 3,-2.2 -2,-0.1 4,-0.3 0.432 47.9 133.4-100.0 -1.7 10.4 23.6 10.0 38 33 A H T 3 S+ 0 0 28 -12,-0.4 70,-0.1 1,-0.3 69,-0.1 -0.182 82.7 6.6 -49.1 134.7 13.5 24.9 8.2 39 34 A G T 3 S+ 0 0 31 68,-2.7 -1,-0.3 -14,-0.2 4,-0.2 0.637 85.9 138.9 63.6 21.4 15.2 22.1 6.3 40 35 A I X + 0 0 11 -3,-2.2 3,-2.1 2,-0.1 24,-0.3 0.864 42.0 92.9 -62.4 -38.7 12.4 19.6 7.1 41 36 A F T 3 S+ 0 0 50 1,-0.3 24,-0.2 -4,-0.3 3,-0.1 -0.471 100.0 10.5 -65.2 127.8 12.4 18.0 3.7 42 37 A G T 3 S+ 0 0 53 22,-3.6 -1,-0.3 1,-0.5 2,-0.1 0.124 105.6 111.2 91.2 -15.9 14.7 15.0 3.6 43 38 A R S < S- 0 0 70 -3,-2.1 21,-2.6 -4,-0.2 -1,-0.5 -0.461 71.2-117.9 -84.6 157.1 15.1 15.1 7.4 44 39 A H B > -A 63 0A 71 19,-0.2 3,-0.5 -2,-0.1 19,-0.2 -0.654 40.5 -86.4 -90.6 159.8 13.5 12.3 9.5 45 40 A S T 3 S+ 0 0 0 17,-2.0 -1,-0.1 -2,-0.2 16,-0.1 -0.291 106.2 21.3 -68.9 145.2 10.7 13.0 12.0 46 41 A G T 3 S+ 0 0 12 -3,-0.1 -1,-0.2 -2,-0.1 7,-0.1 0.836 89.0 110.3 65.8 43.5 11.6 14.1 15.5 47 42 A Q < + 0 0 113 -3,-0.5 2,-0.2 2,-0.1 -2,-0.1 0.443 31.2 115.3-124.4 -2.3 15.1 15.2 14.9 48 43 A A > - 0 0 14 1,-0.1 3,-1.0 -12,-0.0 2,-0.2 -0.505 69.1-120.9 -67.5 137.5 15.1 19.0 15.3 49 44 A E T 3 S+ 0 0 182 1,-0.2 3,-0.1 -2,-0.2 -1,-0.1 -0.447 89.1 26.3 -84.3 148.9 17.4 19.7 18.2 50 45 A G T 3 S+ 0 0 80 1,-0.3 2,-0.4 -2,-0.2 -1,-0.2 0.678 96.2 110.6 83.2 11.9 16.1 21.5 21.3 51 46 A Y < - 0 0 40 -3,-1.0 2,-1.1 -5,-0.0 -1,-0.3 -0.969 65.1-135.1-120.3 139.9 12.6 20.4 20.7 52 47 A S - 0 0 93 -2,-0.4 2,-0.1 -3,-0.1 -3,-0.1 -0.690 32.0-176.5 -97.8 98.8 10.7 17.9 22.9 53 48 A Y - 0 0 37 -2,-1.1 2,-0.1 -5,-0.1 30,-0.0 -0.482 30.2 -96.1 -88.1 163.5 8.8 15.5 20.5 54 49 A T > - 0 0 32 -2,-0.1 4,-1.5 1,-0.1 5,-0.1 -0.369 30.1-118.4 -75.7 158.6 6.5 12.7 21.4 55 50 A D H > S+ 0 0 121 1,-0.2 4,-2.0 2,-0.2 5,-0.2 0.893 113.6 60.7 -57.6 -48.0 7.8 9.2 21.6 56 51 A A H > S+ 0 0 26 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.834 103.1 46.5 -49.4 -50.1 5.5 8.4 18.7 57 52 A I H > S+ 0 0 13 2,-0.2 4,-1.3 1,-0.2 5,-0.5 0.889 111.7 50.1 -67.5 -38.4 7.0 10.8 16.1 58 53 A I H < S+ 0 0 75 -4,-1.5 -1,-0.2 1,-0.2 -2,-0.2 0.924 116.1 42.3 -62.2 -47.7 10.6 9.9 16.8 59 54 A K H < S+ 0 0 151 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.655 103.0 63.9 -73.4 -27.6 9.8 6.2 16.4 60 55 A K H < S- 0 0 90 -4,-1.7 -1,-0.2 -5,-0.2 -2,-0.2 0.871 85.3-169.8 -63.7 -35.6 7.5 6.7 13.4 61 56 A N < - 0 0 79 -4,-1.3 -3,-0.1 -5,-0.2 -2,-0.1 0.846 8.8-172.9 46.9 44.2 10.9 7.9 12.0 62 57 A V - 0 0 9 -5,-0.5 -17,-2.0 -18,-0.1 2,-0.7 -0.302 23.0-132.0 -66.0 139.3 9.2 9.2 8.9 63 58 A L B -A 44 0A 82 -19,-0.2 2,-0.7 -2,-0.1 -19,-0.2 -0.907 26.4-128.3 -98.2 117.3 11.4 10.5 6.1 64 59 A W + 0 0 9 -21,-2.6 -22,-3.6 -2,-0.7 2,-0.3 -0.606 46.8 145.4 -75.8 108.2 9.9 13.9 5.1 65 60 A D > - 0 0 60 -2,-0.7 4,-2.4 -24,-0.2 5,-0.3 -0.784 67.0 -95.7-129.7 167.7 9.4 14.1 1.3 66 61 A E H > S+ 0 0 53 -2,-0.3 4,-0.9 1,-0.2 34,-0.1 0.810 126.0 53.1 -56.6 -27.3 6.5 16.0 -0.4 67 62 A N H > S+ 0 0 59 2,-0.2 4,-1.0 1,-0.2 -1,-0.2 0.872 111.4 40.1 -72.2 -48.0 4.7 12.7 -0.5 68 63 A N H > S+ 0 0 39 -3,-0.3 4,-2.4 2,-0.2 -2,-0.2 0.847 111.0 58.3 -67.1 -46.5 4.9 11.8 3.1 69 64 A M H X S+ 0 0 11 -4,-2.4 4,-2.7 1,-0.2 -2,-0.2 0.875 102.4 58.4 -58.9 -37.2 4.2 15.3 4.2 70 65 A S H X S+ 0 0 11 -4,-0.9 4,-1.3 -5,-0.3 -1,-0.2 0.905 106.6 43.4 -62.1 -46.8 1.0 15.0 2.2 71 66 A E H X S+ 0 0 109 -4,-1.0 4,-1.5 2,-0.2 -2,-0.2 0.872 113.6 54.0 -65.2 -40.9 -0.4 12.0 4.2 72 67 A Y H >< S+ 0 0 17 -4,-2.4 3,-0.6 1,-0.2 7,-0.2 0.953 110.0 45.3 -56.1 -54.8 0.7 13.7 7.4 73 68 A L H 3< S+ 0 0 14 -4,-2.7 17,-2.9 1,-0.2 -1,-0.2 0.735 103.7 65.0 -62.1 -28.1 -1.1 16.9 6.7 74 69 A T H 3< S- 0 0 44 -4,-1.3 -1,-0.2 15,-0.3 -2,-0.2 0.923 133.9 -16.4 -59.6 -46.4 -4.2 14.9 5.6 75 70 A N S+ 0 0 0 0, 0.0 4,-2.3 0, 0.0 7,-0.2 0.874 86.9 44.6 -48.7 -54.4 -1.8 13.9 11.4 77 72 A X H 4 S+ 0 0 148 10,-0.4 6,-0.2 1,-0.2 5,-0.1 0.784 112.0 52.3 -67.9 -28.5 -3.0 11.6 14.2 78 73 A K H 4 S+ 0 0 173 -3,-0.3 -1,-0.2 1,-0.2 -6,-0.1 0.827 115.5 43.0 -74.2 -33.6 -4.2 8.8 11.8 79 74 A Y H < S+ 0 0 45 -4,-2.0 -2,-0.2 1,-0.3 -1,-0.2 0.842 132.3 20.2 -80.1 -34.1 -0.7 8.9 10.2 80 75 A I S >< S- 0 0 2 -4,-2.3 3,-2.5 -5,-0.2 -1,-0.3 -0.796 82.5-154.5-138.1 79.7 1.3 9.1 13.5 81 76 A P T 3 S+ 0 0 94 0, 0.0 -3,-0.1 0, 0.0 3,-0.1 -0.459 83.8 31.8 -57.4 128.1 -1.0 7.8 16.3 82 77 A G T 3 S+ 0 0 55 1,-0.4 -26,-0.2 -2,-0.1 -25,-0.2 0.134 83.5 137.4 107.2 -20.9 0.3 9.5 19.5 83 78 A T < - 0 0 5 -3,-2.5 -1,-0.4 -6,-0.2 -3,-0.1 -0.325 49.6-146.5 -58.6 147.8 1.6 12.7 17.9 84 79 A K + 0 0 97 -3,-0.1 2,-0.6 2,-0.1 -1,-0.1 0.335 59.9 123.9 -95.3 3.6 0.7 15.8 19.9 85 80 A M - 0 0 40 1,-0.1 2,-1.1 -9,-0.1 -8,-0.1 -0.626 53.4-154.5 -67.2 116.3 0.3 17.9 16.7 86 81 A A + 0 0 88 -2,-0.6 2,-0.4 -10,-0.1 -1,-0.1 -0.567 47.2 124.1 -96.5 68.6 -3.2 19.2 17.3 87 82 A S - 0 0 33 -2,-1.1 -10,-0.4 1,-0.1 3,-0.1 -0.982 54.9-148.6-125.5 135.0 -4.3 19.8 13.7 88 83 A G - 0 0 54 -2,-0.4 -1,-0.1 1,-0.2 2,-0.1 0.587 53.8-118.8 -79.4 -11.1 -7.3 18.2 12.1 89 84 A G - 0 0 8 -14,-0.1 2,-0.6 -13,-0.0 -15,-0.3 -0.157 17.3 -78.8 97.6 168.6 -5.5 18.1 8.8 90 85 A L - 0 0 10 -17,-2.9 6,-0.0 -20,-0.2 -1,-0.0 -0.956 40.0-174.9-108.9 103.5 -5.9 19.5 5.2 91 86 A K + 0 0 136 -2,-0.6 2,-0.6 1,-0.0 -1,-0.1 0.774 59.7 80.8 -78.4 -30.4 -8.5 17.2 3.5 92 87 A K >> - 0 0 126 1,-0.1 4,-2.2 -18,-0.0 3,-0.7 -0.709 67.1-151.2 -87.6 126.5 -8.2 18.8 0.0 93 88 A E H 3> S+ 0 0 93 -2,-0.6 4,-3.0 1,-0.3 -89,-0.2 0.885 98.7 61.2 -59.1 -36.0 -5.3 17.6 -2.1 94 89 A K H 3> S+ 0 0 136 2,-0.2 4,-2.0 1,-0.2 -1,-0.3 0.886 107.3 43.8 -60.1 -39.6 -5.4 21.1 -3.8 95 90 A D H <> S+ 0 0 34 -3,-0.7 4,-3.4 2,-0.2 -2,-0.2 0.905 114.6 49.1 -69.9 -41.9 -4.7 22.8 -0.4 96 91 A R H X S+ 0 0 31 -4,-2.2 4,-3.3 1,-0.2 5,-0.3 0.906 110.0 52.2 -60.7 -44.5 -2.0 20.3 0.5 97 92 A N H X S+ 0 0 13 -4,-3.0 4,-1.7 -5,-0.3 -91,-0.7 0.926 111.8 44.8 -62.6 -48.9 -0.4 20.7 -2.9 98 93 A D H X S+ 0 0 21 -4,-2.0 4,-2.2 2,-0.2 -87,-0.4 0.922 115.7 48.7 -61.7 -46.6 -0.3 24.5 -2.5 99 94 A L H X S+ 0 0 0 -4,-3.4 4,-3.3 1,-0.2 -2,-0.2 0.918 112.2 45.8 -60.6 -50.9 1.0 24.2 1.0 100 95 A I H X S+ 0 0 0 -4,-3.3 4,-3.4 2,-0.2 5,-0.3 0.826 109.8 56.5 -57.7 -32.9 3.7 21.7 0.3 101 96 A T H X S+ 0 0 10 -4,-1.7 4,-1.4 -5,-0.3 -1,-0.2 0.941 112.0 42.0 -65.2 -45.0 4.7 23.8 -2.7 102 97 A Y H X S+ 0 0 36 -4,-2.2 4,-2.9 -95,-0.3 5,-0.3 0.915 116.1 49.0 -63.9 -46.8 5.2 26.7 -0.4 103 98 A L H X S+ 0 0 5 -4,-3.3 4,-2.3 2,-0.2 -2,-0.2 0.879 106.6 55.4 -64.9 -42.0 6.9 24.6 2.2 104 99 A K H < S+ 0 0 89 -4,-3.4 -1,-0.2 1,-0.2 -2,-0.2 0.897 116.1 40.0 -52.7 -45.5 9.3 23.0 -0.3 105 100 A K H >< S+ 0 0 134 -4,-1.4 3,-0.5 -5,-0.3 -2,-0.2 0.908 119.1 41.5 -73.9 -44.1 10.4 26.5 -1.2 106 101 A A H 3< S+ 0 0 27 -4,-2.9 -79,-0.2 1,-0.2 -3,-0.2 0.721 109.4 55.3 -81.9 -26.1 10.5 28.2 2.2 107 102 A A T 3< 0 0 1 -4,-2.3 -68,-2.7 -5,-0.3 -1,-0.2 0.416 360.0 360.0 -85.5 3.9 12.1 25.5 4.3 108 103 A E < 0 0 186 -3,-0.5 -1,-0.2 -70,-0.1 -2,-0.2 0.929 360.0 360.0 -89.4 360.0 15.1 25.3 1.9