==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT(HEME PROTEIN) 26-SEP-94 1CIF . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR T.P.LO,G.D.BRAYER . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6636.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 58.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A T 0 0 129 0, 0.0 3,-0.1 0, 0.0 66,-0.0 0.000 360.0 360.0 360.0-109.9 4.4 10.8 -7.8 2 -4 A E + 0 0 170 1,-0.2 2,-0.4 0, 0.0 0, 0.0 -0.040 360.0 83.3-168.4 27.9 1.0 11.9 -6.4 3 -3 A F - 0 0 18 94,-0.0 2,-0.4 93,-0.0 -1,-0.2 -0.989 56.3-167.7-137.6 133.7 1.7 15.5 -5.5 4 -2 A K - 0 0 159 -2,-0.4 97,-0.1 -3,-0.1 0, 0.0 -0.972 29.5-104.4-128.4 140.0 1.5 18.3 -8.1 5 -1 A A + 0 0 74 -2,-0.4 93,-0.2 1,-0.1 2,-0.1 -0.223 44.1 168.5 -65.5 153.9 2.9 21.9 -7.5 6 1 A G - 0 0 40 91,-0.5 2,-0.7 92,-0.2 -1,-0.1 -0.199 45.0 -30.9-130.9-135.5 0.3 24.6 -6.9 7 2 A S > - 0 0 45 1,-0.2 4,-2.4 -2,-0.1 95,-0.3 -0.874 33.2-169.5-111.3 116.4 0.5 28.2 -5.8 8 3 A A H > S+ 0 0 16 -2,-0.7 4,-2.1 2,-0.2 -1,-0.2 0.765 96.1 53.0 -69.0 -28.4 3.2 29.3 -3.4 9 4 A K H > S+ 0 0 175 2,-0.2 4,-1.1 1,-0.2 -1,-0.2 0.906 112.5 44.1 -69.8 -41.1 1.4 32.6 -3.0 10 5 A K H > S+ 0 0 106 1,-0.2 4,-0.9 2,-0.2 -2,-0.2 0.857 115.0 50.8 -64.2 -38.2 -1.7 30.6 -2.1 11 6 A G H X S+ 0 0 0 -4,-2.4 4,-1.9 87,-0.3 -2,-0.2 0.813 101.3 60.9 -67.9 -38.2 0.5 28.4 0.1 12 7 A A H X S+ 0 0 19 -4,-2.1 4,-1.5 1,-0.2 -1,-0.2 0.844 109.8 41.4 -59.5 -43.2 2.1 31.4 1.9 13 8 A T H X S+ 0 0 75 -4,-1.1 4,-1.9 2,-0.2 -1,-0.2 0.553 109.1 56.6 -83.9 -22.4 -1.3 32.5 3.2 14 9 A L H X S+ 0 0 22 -4,-0.9 4,-2.1 2,-0.2 5,-0.3 0.873 109.2 50.3 -73.3 -37.6 -2.5 29.0 4.1 15 10 A F H X>S+ 0 0 5 -4,-1.9 4,-3.5 3,-0.2 5,-1.9 0.949 110.5 48.9 -62.1 -49.8 0.7 28.8 6.2 16 11 A K H <5S+ 0 0 126 -4,-1.5 4,-0.2 1,-0.2 5,-0.2 0.880 120.2 34.6 -58.5 -48.3 -0.1 32.1 7.9 17 12 A T H <5S+ 0 0 120 -4,-1.9 -1,-0.2 1,-0.1 -2,-0.2 0.703 132.3 28.9 -82.2 -21.2 -3.8 31.2 8.8 18 13 A R H <5S+ 0 0 127 -4,-2.1 -3,-0.2 -5,-0.1 -2,-0.2 0.720 131.6 15.6-112.1 -30.4 -3.1 27.5 9.4 19 14 A C T >X5S+ 0 0 24 -4,-3.5 4,-1.2 -5,-0.3 3,-0.8 0.535 99.4 81.6-123.8 -15.7 0.4 26.8 10.7 20 15 A L T 34 S- 0 0 103 12,-0.1 3,-2.0 1,-0.1 12,-0.3 -0.257 78.2-109.9 -66.0 139.9 12.9 30.8 8.4 27 22 A K T 3 S+ 0 0 167 1,-0.3 -1,-0.1 79,-0.3 -2,-0.1 -0.595 114.6 29.7 -64.9 134.3 16.4 29.5 8.9 28 23 A G T 3 S+ 0 0 83 1,-0.4 -1,-0.3 -2,-0.2 -2,-0.1 0.519 94.9 136.1 88.1 7.9 17.4 31.0 12.4 29 24 A G < - 0 0 14 -3,-2.0 -1,-0.4 -4,-0.1 2,-0.2 -0.623 51.4-121.0 -89.2 145.9 13.7 30.8 13.3 30 25 A P - 0 0 76 0, 0.0 -6,-0.2 0, 0.0 -4,-0.1 -0.557 19.8-101.4 -91.2 161.4 12.8 29.5 16.8 31 26 A H + 0 0 64 -2,-0.2 2,-0.2 5,-0.1 -8,-0.1 -0.388 42.2 170.6 -71.7 148.9 10.8 26.7 18.0 32 27 A K S S- 0 0 87 2,-4.0 -10,-0.1 -10,-0.5 -9,-0.1 -0.155 70.7 -39.5-128.3-132.7 7.2 27.6 19.3 33 28 A V S S+ 0 0 105 -12,-0.3 -10,-0.1 -2,-0.2 -11,-0.1 0.879 142.8 36.9 -58.1 -43.7 4.5 25.2 20.2 34 29 A G S S- 0 0 6 -12,-2.7 -2,-4.0 1,-0.1 -10,-0.2 -0.629 104.7 -93.5-101.5 165.0 5.9 23.4 17.1 35 30 A P - 0 0 15 0, 0.0 -11,-0.2 0, 0.0 2,-0.1 -0.457 47.3 -92.8 -76.0 154.8 9.5 23.1 16.0 36 31 A N - 0 0 24 -7,-0.2 -11,-0.2 -13,-0.2 -5,-0.1 -0.497 36.7-150.6 -63.0 136.7 11.0 25.5 13.4 37 32 A L > + 0 0 30 -13,-3.2 3,-1.9 -2,-0.1 -12,-0.2 0.464 47.9 130.9 -97.0 2.5 10.4 23.8 10.0 38 33 A H T 3 S+ 0 0 54 -12,-0.3 70,-0.1 1,-0.3 69,-0.1 -0.282 80.5 13.0 -56.2 134.0 13.4 25.2 8.0 39 34 A G T 3 S+ 0 0 42 68,-2.4 -1,-0.3 -14,-0.2 69,-0.1 0.675 84.5 137.9 72.8 21.0 15.3 22.3 6.3 40 35 A I X + 0 0 24 -3,-1.9 3,-1.5 67,-0.2 24,-0.3 0.785 41.7 90.3 -65.4 -33.2 12.5 19.8 6.9 41 36 A F T 3 S+ 0 0 51 66,-0.3 24,-0.2 1,-0.3 3,-0.1 -0.525 98.2 15.5 -74.0 128.5 12.6 18.2 3.4 42 37 A G T 3 S+ 0 0 51 22,-4.0 -1,-0.3 1,-0.4 23,-0.1 0.275 104.9 115.1 91.5 -9.5 14.9 15.2 3.3 43 38 A A < - 0 0 31 -3,-1.5 21,-4.2 21,-0.4 -1,-0.4 -0.417 66.5-125.2 -87.7 164.9 15.0 15.1 7.1 44 39 A H B -A 63 0A 83 19,-0.3 3,-0.5 -2,-0.1 19,-0.2 -0.867 43.1 -88.5-104.4 150.2 13.6 12.3 9.2 45 40 A S S S+ 0 0 1 17,-1.8 16,-0.1 -2,-0.4 -1,-0.1 -0.114 102.6 26.3 -56.3 149.5 11.0 13.2 11.9 46 41 A G S S+ 0 0 11 1,-0.1 -1,-0.2 14,-0.0 7,-0.1 0.787 83.4 110.4 67.5 38.7 12.0 14.3 15.4 47 42 A Q + 0 0 141 -3,-0.5 2,-0.4 2,-0.1 -2,-0.1 0.285 30.6 120.3-124.3 8.6 15.5 15.6 14.8 48 43 A A > - 0 0 29 1,-0.1 3,-1.2 2,-0.0 2,-0.3 -0.663 66.4-122.8 -73.3 130.6 15.3 19.4 15.4 49 44 A E T 3 S+ 0 0 184 -2,-0.4 3,-0.1 1,-0.2 -1,-0.1 -0.504 90.9 26.9 -81.3 141.8 17.7 20.2 18.2 50 45 A G T 3 S+ 0 0 81 1,-0.3 2,-0.4 -2,-0.3 -1,-0.2 0.492 96.6 112.7 94.7 2.8 16.3 21.9 21.2 51 46 A Y < - 0 0 43 -3,-1.2 2,-1.1 -5,-0.0 -1,-0.3 -0.890 62.4-136.8-117.8 145.7 12.8 20.6 20.7 52 47 A S - 0 0 91 -2,-0.4 2,-0.1 -3,-0.1 -3,-0.1 -0.643 29.3-177.3 -96.0 83.9 10.7 18.2 22.8 53 48 A Y - 0 0 42 -2,-1.1 30,-0.0 -5,-0.2 -19,-0.0 -0.460 30.1-107.0 -76.0 147.5 9.0 15.8 20.4 54 49 A T > - 0 0 32 -2,-0.1 4,-1.4 1,-0.1 -1,-0.1 -0.202 30.7-109.4 -68.9 172.3 6.7 13.1 21.6 55 50 A D H > S+ 0 0 131 2,-0.2 4,-1.6 1,-0.2 5,-0.1 0.856 116.9 59.5 -73.7 -36.8 7.8 9.5 21.6 56 51 A A H > S+ 0 0 28 26,-0.2 4,-1.1 2,-0.2 -1,-0.2 0.899 104.5 49.5 -51.7 -51.3 5.3 8.8 18.7 57 52 A N H >> S+ 0 0 15 1,-0.2 3,-1.3 2,-0.2 4,-1.0 0.954 112.1 44.6 -51.8 -66.6 6.9 11.3 16.4 58 53 A I H 3< S+ 0 0 74 -4,-1.4 -1,-0.2 1,-0.2 -2,-0.2 0.730 111.6 53.6 -51.8 -34.2 10.5 10.2 16.9 59 54 A K H 3< S+ 0 0 168 -4,-1.6 -1,-0.2 1,-0.2 -2,-0.2 0.632 96.8 64.6 -82.9 -13.4 9.7 6.5 16.5 60 55 A K H << S- 0 0 91 -3,-1.3 -1,-0.2 -4,-1.1 -2,-0.2 0.848 83.1-163.3 -73.1 -39.0 7.9 6.9 13.2 61 56 A N < - 0 0 85 -4,-1.0 -3,-0.1 1,-0.2 2,-0.1 0.816 14.5-172.3 52.0 42.1 11.2 8.0 11.7 62 57 A V - 0 0 6 -5,-0.4 -17,-1.8 -18,-0.1 2,-0.7 -0.363 23.0-137.2 -61.1 131.0 9.5 9.5 8.7 63 58 A L B -A 44 0A 70 -19,-0.2 2,-0.9 -2,-0.1 -19,-0.3 -0.883 29.1-127.8 -93.4 119.0 11.8 10.8 5.8 64 59 A W + 0 0 11 -21,-4.2 -22,-4.0 -2,-0.7 -21,-0.4 -0.656 47.3 149.1 -76.4 104.4 10.2 14.1 4.9 65 60 A D > - 0 0 60 -2,-0.9 4,-1.8 -24,-0.2 5,-0.2 -0.655 62.0-100.5-121.4 172.2 9.5 14.3 1.1 66 61 A E H > S+ 0 0 65 -2,-0.2 4,-0.5 1,-0.2 34,-0.1 0.721 122.6 54.0 -69.4 -22.1 6.6 16.2 -0.6 67 62 A N H > S+ 0 0 47 2,-0.2 4,-1.1 3,-0.1 -1,-0.2 0.887 110.5 42.6 -76.2 -47.2 4.7 12.9 -0.9 68 63 A N H > S+ 0 0 37 2,-0.2 4,-2.9 1,-0.2 3,-0.2 0.903 108.7 60.7 -61.7 -48.5 4.9 11.9 2.8 69 64 A M H X S+ 0 0 13 -4,-1.8 4,-2.4 1,-0.2 -1,-0.2 0.770 102.7 52.9 -54.1 -30.3 4.1 15.5 3.9 70 65 A S H X S+ 0 0 10 -4,-0.5 4,-0.7 2,-0.2 -1,-0.2 0.928 109.4 44.4 -77.0 -49.0 0.7 15.3 2.1 71 66 A E H >X S+ 0 0 119 -4,-1.1 3,-0.9 2,-0.2 4,-0.8 0.903 115.5 51.6 -60.9 -44.1 -0.5 12.1 3.6 72 67 A Y H >< S+ 0 0 21 -4,-2.9 3,-1.1 1,-0.2 7,-0.2 0.945 107.2 51.0 -55.7 -55.4 0.7 13.6 6.9 73 68 A L H 3< S+ 0 0 17 -4,-2.4 17,-1.9 1,-0.2 -1,-0.2 0.563 99.2 67.9 -61.9 -11.4 -1.2 16.9 6.4 74 69 A T H << S- 0 0 45 -3,-0.9 -1,-0.2 -4,-0.7 -2,-0.2 0.854 131.8 -15.8 -70.9 -45.5 -4.4 15.0 5.7 75 70 A N XX - 0 0 68 -3,-1.1 4,-1.8 -4,-0.8 3,-0.9 -0.605 65.8-169.7-167.5 86.1 -4.8 13.7 9.2 76 71 A P H 3> S+ 0 0 0 0, 0.0 4,-3.4 0, 0.0 7,-0.2 0.847 86.4 53.9 -53.9 -39.1 -1.6 14.0 11.3 77 72 A X H 34 S+ 0 0 144 10,-0.3 5,-0.2 2,-0.2 6,-0.2 0.683 108.1 48.8 -72.5 -22.6 -2.9 11.8 14.1 78 73 A K H <4 S+ 0 0 178 -3,-0.9 -1,-0.2 -6,-0.2 -6,-0.1 0.835 116.3 44.4 -82.9 -35.3 -3.9 8.9 11.9 79 74 A Y H < S+ 0 0 47 -4,-1.8 -2,-0.2 1,-0.3 -1,-0.1 0.882 130.6 23.5 -74.4 -44.2 -0.4 9.2 10.3 80 75 A I S >< S- 0 0 2 -4,-3.4 3,-3.2 -5,-0.2 -1,-0.3 -0.742 83.3-152.8-129.7 86.1 1.4 9.5 13.7 81 76 A P T 3 S+ 0 0 94 0, 0.0 -3,-0.1 0, 0.0 3,-0.1 -0.365 84.2 22.0 -63.5 122.5 -0.8 8.1 16.4 82 77 A G T 3 S+ 0 0 56 1,-0.3 -26,-0.2 -5,-0.2 -25,-0.1 0.282 85.3 147.9 100.8 -3.9 0.0 9.8 19.6 83 78 A T < - 0 0 8 -3,-3.2 -1,-0.3 -7,-0.2 -3,-0.0 -0.261 46.3-142.0 -54.8 146.3 1.5 12.9 18.0 84 79 A K + 0 0 107 -3,-0.1 2,-0.5 2,-0.1 -1,-0.1 0.432 64.1 117.9 -93.4 2.0 0.9 16.1 20.0 85 80 A M - 0 0 44 1,-0.1 2,-1.1 -9,-0.0 -8,-0.1 -0.616 55.1-153.8 -71.0 115.2 0.2 18.3 16.9 86 81 A A + 0 0 90 -2,-0.5 2,-0.4 -10,-0.1 -1,-0.1 -0.589 48.5 117.2 -96.1 75.6 -3.3 19.5 17.4 87 82 A S - 0 0 44 -2,-1.1 -10,-0.3 1,-0.1 3,-0.1 -0.997 55.6-144.3-137.4 136.5 -4.5 20.2 13.8 88 83 A G - 0 0 58 -2,-0.4 2,-0.2 1,-0.2 -1,-0.1 0.727 52.7-102.6 -76.3 -27.4 -7.4 18.3 12.2 89 84 A G - 0 0 9 -14,-0.1 2,-0.6 -13,-0.1 -15,-0.3 -0.621 17.6 -91.3 128.2 167.5 -6.0 18.2 8.6 90 85 A L - 0 0 8 -17,-1.9 6,-0.0 -2,-0.2 -3,-0.0 -0.981 39.3-176.5-123.6 102.8 -6.2 19.7 5.2 91 86 A K + 0 0 111 -2,-0.6 2,-0.4 4,-0.0 -1,-0.1 0.676 57.8 77.3 -79.5 -27.0 -8.7 17.5 3.4 92 87 A K S > S- 0 0 134 1,-0.1 4,-1.5 -18,-0.0 3,-0.3 -0.750 71.0-145.8 -89.9 128.6 -8.6 19.0 -0.1 93 88 A E H > S+ 0 0 101 -2,-0.4 4,-3.7 1,-0.2 5,-0.2 0.856 97.4 62.9 -60.4 -34.9 -5.5 18.0 -2.1 94 89 A K H > S+ 0 0 139 1,-0.2 4,-2.8 2,-0.2 -1,-0.2 0.893 104.2 47.0 -60.5 -39.9 -5.4 21.4 -3.8 95 90 A D H > S+ 0 0 29 -3,-0.3 4,-3.3 2,-0.2 -1,-0.2 0.907 114.4 46.3 -67.7 -42.6 -4.8 23.1 -0.4 96 91 A R H X S+ 0 0 30 -4,-1.5 4,-2.9 2,-0.2 5,-0.3 0.906 111.9 52.6 -65.5 -40.0 -2.1 20.6 0.5 97 92 A N H X S+ 0 0 14 -4,-3.7 4,-1.8 2,-0.2 -91,-0.5 0.967 112.9 44.3 -60.2 -52.9 -0.6 21.0 -3.0 98 93 A D H X S+ 0 0 19 -4,-2.8 4,-1.7 1,-0.2 -87,-0.3 0.935 114.8 48.5 -55.6 -49.9 -0.6 24.8 -2.5 99 94 A L H X S+ 0 0 1 -4,-3.3 4,-2.3 1,-0.2 3,-0.4 0.928 111.9 46.7 -61.5 -47.9 0.9 24.5 1.1 100 95 A I H X S+ 0 0 0 -4,-2.9 4,-2.9 1,-0.2 -1,-0.2 0.756 107.3 58.1 -61.3 -31.5 3.7 22.0 0.2 101 96 A T H X S+ 0 0 8 -4,-1.8 4,-1.3 -5,-0.3 -1,-0.2 0.918 111.7 42.3 -63.0 -43.2 4.7 24.1 -2.8 102 97 A Y H X S+ 0 0 43 -4,-1.7 4,-2.3 -3,-0.4 -2,-0.2 0.873 115.5 47.9 -65.1 -51.1 5.2 27.0 -0.4 103 98 A L H X S+ 0 0 5 -4,-2.3 4,-2.4 2,-0.2 -2,-0.2 0.895 106.4 58.7 -60.6 -46.2 6.9 24.9 2.3 104 99 A K H < S+ 0 0 85 -4,-2.9 -1,-0.2 1,-0.2 -2,-0.2 0.897 114.2 38.7 -48.8 -45.3 9.2 23.4 -0.5 105 100 A K H >< S+ 0 0 125 -4,-1.3 3,-0.5 -5,-0.2 -2,-0.2 0.873 119.5 40.4 -74.5 -48.4 10.3 27.0 -1.2 106 101 A A H 3< S+ 0 0 31 -4,-2.3 -79,-0.3 1,-0.2 -2,-0.2 0.737 108.9 57.7 -78.7 -31.2 10.6 28.7 2.2 107 102 A A T 3< 0 0 1 -4,-2.4 -68,-2.4 -5,-0.2 -66,-0.3 0.085 360.0 360.0 -88.3 18.9 12.1 25.8 4.2 108 103 A E < 0 0 163 -3,-0.5 -1,-0.2 -70,-0.1 -2,-0.2 0.897 360.0 360.0-100.0 360.0 15.1 25.6 1.8