==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT(HEME PROTEIN) 26-SEP-94 1CIG . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR T.P.LO,G.D.BRAYER . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6607.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 64 59.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A T 0 0 122 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-118.7 5.2 11.7 -7.5 2 -4 A E + 0 0 182 1,-0.1 2,-0.3 0, 0.0 0, 0.0 -0.020 360.0 80.2-156.8 19.8 1.6 12.0 -6.3 3 -3 A F - 0 0 17 94,-0.0 2,-0.4 93,-0.0 64,-0.1 -0.945 67.1-156.2-127.0 136.1 1.9 15.6 -5.4 4 -2 A K - 0 0 153 -2,-0.3 97,-0.1 -3,-0.1 0, 0.0 -0.998 29.8 -96.6-131.9 133.7 1.7 18.4 -8.1 5 -1 A A + 0 0 86 -2,-0.4 93,-0.2 1,-0.1 2,-0.1 -0.024 52.3 172.1 -40.5 139.6 3.2 21.9 -8.0 6 1 A G - 0 0 36 91,-0.5 2,-0.7 92,-0.2 3,-0.1 -0.255 42.1 -40.8-129.4-142.0 0.6 24.4 -6.8 7 2 A S > - 0 0 43 1,-0.2 4,-2.3 -2,-0.1 95,-0.3 -0.854 37.8-170.9 -99.7 117.6 0.5 28.1 -5.8 8 3 A A H > S+ 0 0 38 -2,-0.7 4,-3.1 2,-0.2 -1,-0.2 0.867 93.6 50.7 -70.7 -38.7 3.4 29.1 -3.7 9 4 A K H > S+ 0 0 175 2,-0.2 4,-1.3 1,-0.2 -1,-0.2 0.910 113.4 44.9 -65.5 -40.2 1.7 32.4 -3.1 10 5 A K H > S+ 0 0 107 1,-0.2 4,-1.5 2,-0.2 -2,-0.2 0.916 113.3 50.4 -66.3 -42.7 -1.4 30.5 -2.1 11 6 A G H X S+ 0 0 0 -4,-2.3 4,-2.6 87,-0.3 -2,-0.2 0.897 103.6 59.7 -61.7 -41.7 0.6 28.2 0.0 12 7 A A H X S+ 0 0 20 -4,-3.1 4,-1.7 1,-0.2 -1,-0.2 0.835 109.4 43.7 -57.1 -38.8 2.4 31.1 1.8 13 8 A T H X S+ 0 0 72 -4,-1.3 4,-1.4 2,-0.2 -1,-0.2 0.720 110.6 52.8 -80.8 -27.6 -1.1 32.4 3.0 14 9 A L H X>S+ 0 0 18 -4,-1.5 4,-2.6 -3,-0.2 5,-0.5 0.892 109.3 51.9 -72.0 -40.5 -2.3 28.9 4.0 15 10 A F H X>S+ 0 0 3 -4,-2.6 4,-3.2 1,-0.2 5,-2.5 0.980 108.9 49.7 -53.5 -56.4 0.9 28.6 6.1 16 11 A K H <5S+ 0 0 130 -4,-1.7 -1,-0.2 1,-0.2 -2,-0.2 0.862 120.2 35.5 -55.1 -38.9 0.3 31.9 7.8 17 12 A T H <5S+ 0 0 112 -4,-1.4 -1,-0.2 3,-0.1 -2,-0.2 0.661 131.0 27.7 -93.3 -19.8 -3.3 31.0 8.7 18 13 A R H <5S+ 0 0 113 -4,-2.6 -3,-0.2 -3,-0.2 -2,-0.2 0.626 133.0 20.0-116.8 -25.6 -2.9 27.2 9.4 19 14 A C T >X S- 0 0 93 1,-0.1 3,-1.7 12,-0.1 2,-0.5 -0.204 81.3-100.5 -81.0 156.8 12.9 30.5 8.3 27 22 A K T 3 S+ 0 0 172 1,-0.3 -1,-0.1 79,-0.2 -2,-0.1 -0.597 114.9 21.7 -74.0 120.5 16.5 29.7 8.9 28 23 A G T 3 S+ 0 0 82 -2,-0.5 -1,-0.3 1,-0.3 -2,-0.1 0.533 93.2 139.1 97.9 1.8 17.3 30.9 12.4 29 24 A G < - 0 0 14 -3,-1.7 -1,-0.3 1,-0.1 7,-0.2 -0.498 52.8-112.5 -79.2 142.3 13.6 30.9 13.4 30 25 A P - 0 0 86 0, 0.0 2,-0.3 0, 0.0 -6,-0.3 -0.325 21.1-108.5 -82.4 157.2 12.8 29.6 16.9 31 26 A H + 0 0 62 4,-0.1 2,-0.2 5,-0.1 -8,-0.1 -0.717 45.8 170.0 -75.0 144.0 11.0 26.5 17.9 32 27 A K - 0 0 90 2,-3.5 -10,-0.1 -10,-0.5 -9,-0.1 -0.096 67.8 -33.4-127.5-134.5 7.6 27.5 19.3 33 28 A V S S+ 0 0 107 -12,-0.3 -10,-0.1 -2,-0.2 -11,-0.1 0.874 143.0 28.6 -51.8 -42.6 4.7 25.1 20.1 34 29 A G S S- 0 0 5 -12,-2.3 -2,-3.5 1,-0.1 -10,-0.2 -0.757 106.0 -83.3-116.1 165.4 6.1 23.1 17.2 35 30 A P - 0 0 15 0, 0.0 -11,-0.2 0, 0.0 2,-0.2 -0.361 46.0 -97.7 -70.7 152.5 9.6 22.9 15.8 36 31 A N - 0 0 27 -7,-0.2 -11,-0.2 -13,-0.2 -5,-0.1 -0.496 36.6-150.2 -62.9 135.7 11.2 25.4 13.4 37 32 A L > + 0 0 27 -13,-3.9 3,-1.8 -2,-0.2 4,-0.2 0.308 47.1 129.9-100.2 12.3 10.7 23.7 10.0 38 33 A H T 3 S+ 0 0 48 -12,-0.4 70,-0.2 1,-0.3 69,-0.1 -0.347 80.6 16.7 -60.9 147.7 13.7 25.0 7.9 39 34 A G T 3 S+ 0 0 43 68,-2.8 -1,-0.3 -14,-0.2 69,-0.1 0.588 85.7 136.6 66.4 15.3 15.5 22.1 6.3 40 35 A I X + 0 0 24 -3,-1.8 3,-1.9 67,-0.1 24,-0.3 0.870 40.5 88.3 -64.8 -36.4 12.6 19.8 6.8 41 36 A F T 3 S+ 0 0 50 1,-0.3 24,-0.2 -4,-0.2 3,-0.1 -0.502 99.8 15.2 -70.3 130.5 12.5 18.1 3.4 42 37 A G T 3 S+ 0 0 49 22,-3.9 -1,-0.3 1,-0.4 2,-0.2 0.346 103.4 111.6 91.2 -2.7 14.8 15.0 3.3 43 38 A A S < S- 0 0 36 -3,-1.9 21,-3.2 21,-0.3 -1,-0.4 -0.587 70.0-115.8 -99.0 164.3 15.1 14.9 7.1 44 39 A H B > -A 63 0A 79 19,-0.2 3,-0.5 -2,-0.2 19,-0.2 -0.646 43.4 -90.7 -92.5 159.3 13.6 12.1 9.3 45 40 A S T 3 S+ 0 0 0 17,-1.5 16,-0.1 -2,-0.2 -1,-0.1 -0.340 104.5 24.6 -67.6 148.6 10.8 13.1 11.8 46 41 A G T 3 S+ 0 0 10 -2,-0.1 -1,-0.2 1,-0.1 7,-0.1 0.823 86.5 109.9 64.3 45.5 11.9 14.2 15.4 47 42 A Q < + 0 0 133 -3,-0.5 2,-0.3 2,-0.1 -2,-0.1 0.319 31.0 118.2-130.3 9.2 15.4 15.4 14.7 48 43 A A > - 0 0 34 1,-0.1 3,-1.0 2,-0.0 2,-0.2 -0.562 68.6-116.2 -69.7 138.4 15.5 19.1 15.1 49 44 A E T 3 S+ 0 0 191 -2,-0.3 3,-0.1 1,-0.2 -1,-0.1 -0.469 91.1 21.4 -84.9 148.0 17.8 19.9 18.0 50 45 A G T 3 S+ 0 0 77 1,-0.3 2,-0.4 -2,-0.2 -1,-0.2 0.686 97.0 114.6 78.4 17.9 16.6 21.6 21.2 51 46 A Y < - 0 0 45 -3,-1.0 2,-1.0 -5,-0.0 -1,-0.3 -0.939 62.3-136.2-117.2 142.9 13.0 20.5 20.6 52 47 A S + 0 0 92 -2,-0.4 -3,-0.1 -3,-0.1 2,-0.0 -0.656 30.7 178.4-102.4 87.6 11.0 18.0 22.8 53 48 A Y - 0 0 41 -2,-1.0 2,-0.0 -5,-0.2 30,-0.0 -0.358 33.3 -98.1 -79.0 165.9 9.1 15.7 20.4 54 49 A T > - 0 0 30 1,-0.1 4,-1.3 -2,-0.0 5,-0.1 -0.324 32.2-111.8 -78.8 166.7 6.8 12.8 21.5 55 50 A D H > S+ 0 0 126 1,-0.2 4,-1.5 2,-0.2 5,-0.2 0.853 115.7 61.2 -63.4 -35.2 8.2 9.3 21.6 56 51 A A H > S+ 0 0 25 26,-0.3 4,-1.7 2,-0.2 -1,-0.2 0.888 100.3 47.3 -60.1 -46.9 5.8 8.6 18.6 57 52 A I H > S+ 0 0 15 1,-0.2 4,-1.2 25,-0.2 5,-0.4 0.957 113.5 49.0 -62.4 -48.8 7.1 11.0 16.0 58 53 A I H < S+ 0 0 78 -4,-1.3 -1,-0.2 1,-0.2 -2,-0.2 0.787 115.1 43.7 -53.6 -43.9 10.7 10.0 16.6 59 54 A K H < S+ 0 0 163 -4,-1.5 -1,-0.2 1,-0.2 -2,-0.2 0.662 100.9 66.6 -77.9 -29.8 9.9 6.3 16.3 60 55 A K H < S- 0 0 89 -4,-1.7 -2,-0.2 -3,-0.3 -1,-0.2 0.885 86.8-164.8 -59.4 -40.3 7.7 6.7 13.3 61 56 A N < - 0 0 78 -4,-1.2 -3,-0.1 1,-0.2 -2,-0.1 0.686 10.7-176.7 51.9 39.4 11.0 7.7 11.7 62 57 A V - 0 0 7 -5,-0.4 -17,-1.5 -18,-0.1 2,-0.7 -0.227 24.4-139.6 -59.4 130.7 9.4 9.3 8.6 63 58 A L B -A 44 0A 77 -19,-0.2 2,-0.7 -22,-0.0 -19,-0.2 -0.924 31.6-124.5 -95.5 124.0 11.8 10.6 5.9 64 59 A W + 0 0 11 -21,-3.2 -22,-3.9 -2,-0.7 -21,-0.3 -0.636 45.1 151.8 -80.0 111.2 10.1 13.9 4.8 65 60 A D >> - 0 0 58 -2,-0.7 4,-2.0 -24,-0.2 3,-0.9 -0.788 61.7 -96.1-124.7 166.8 9.3 14.3 1.1 66 61 A E H 3> S+ 0 0 54 -2,-0.3 4,-0.7 1,-0.3 34,-0.1 0.791 125.4 49.8 -50.8 -31.4 6.5 16.4 -0.6 67 62 A N H 3> S+ 0 0 40 2,-0.2 4,-0.8 1,-0.1 -1,-0.3 0.771 110.2 43.4 -81.7 -33.5 4.5 13.2 -0.7 68 63 A N H <> S+ 0 0 35 -3,-0.9 4,-3.5 2,-0.2 -2,-0.2 0.762 111.5 57.7 -78.5 -41.3 4.8 11.9 3.0 69 64 A M H X S+ 0 0 12 -4,-2.0 4,-2.7 2,-0.2 -2,-0.2 0.844 103.3 53.8 -59.1 -38.0 4.2 15.4 4.1 70 65 A S H X S+ 0 0 12 -4,-0.7 4,-0.7 -5,-0.3 -1,-0.2 0.881 109.0 46.4 -68.1 -45.6 0.9 15.4 2.2 71 66 A E H >X S+ 0 0 120 -4,-0.8 4,-1.0 2,-0.2 3,-0.9 0.923 114.0 50.8 -66.2 -41.7 -0.3 12.3 3.9 72 67 A Y H >< S+ 0 0 17 -4,-3.5 3,-1.0 1,-0.3 7,-0.2 0.960 108.5 49.9 -59.6 -53.8 0.7 13.8 7.2 73 68 A L H 3< S+ 0 0 13 -4,-2.7 17,-2.9 1,-0.2 -1,-0.3 0.580 101.4 64.8 -59.8 -18.0 -1.1 17.1 6.6 74 69 A T H << S- 0 0 39 -3,-0.9 -1,-0.2 -4,-0.7 -2,-0.2 0.858 132.9 -15.1 -70.4 -43.9 -4.3 15.3 5.7 75 70 A N S+ 0 0 0 0, 0.0 4,-2.5 0, 0.0 3,-0.2 0.826 86.8 44.1 -54.5 -51.2 -1.6 13.9 11.4 77 72 A X H 4 S+ 0 0 150 10,-0.3 6,-0.1 1,-0.3 11,-0.1 0.768 112.1 55.3 -68.9 -30.8 -2.8 11.7 14.3 78 73 A K H 4 S+ 0 0 168 1,-0.2 -1,-0.3 -6,-0.2 -6,-0.1 0.873 115.7 39.2 -70.1 -35.0 -4.1 9.3 11.8 79 74 A Y H < S+ 0 0 53 -4,-1.5 -2,-0.2 1,-0.3 -1,-0.2 0.730 132.5 22.4 -82.2 -35.6 -0.6 9.2 10.2 80 75 A I S >< S- 0 0 2 -4,-2.5 3,-2.0 -8,-0.1 -1,-0.3 -0.786 85.1-148.2-134.7 85.9 1.5 9.3 13.5 81 76 A P T 3 S+ 0 0 94 0, 0.0 -3,-0.1 0, 0.0 3,-0.1 -0.402 83.3 24.7 -60.9 131.6 -0.7 8.0 16.3 82 77 A G T 3 S+ 0 0 55 1,-0.3 -26,-0.3 -26,-0.1 -25,-0.2 0.397 83.6 144.4 93.5 1.8 0.2 9.7 19.6 83 78 A T < - 0 0 6 -3,-2.0 -1,-0.3 -27,-0.1 -3,-0.1 -0.504 48.0-143.2 -68.6 144.4 1.7 12.9 17.9 84 79 A K + 0 0 104 -3,-0.1 2,-0.8 -2,-0.1 -1,-0.1 0.411 63.0 121.0 -89.8 1.8 1.0 16.0 20.0 85 80 A M - 0 0 42 1,-0.1 2,-1.4 2,-0.0 -8,-0.1 -0.596 54.0-156.0 -66.9 104.9 0.6 18.2 16.8 86 81 A A + 0 0 86 -2,-0.8 2,-0.4 -10,-0.1 -1,-0.1 -0.483 47.9 121.8 -86.0 62.9 -3.0 19.3 17.5 87 82 A F - 0 0 35 -2,-1.4 -10,-0.3 1,-0.1 3,-0.1 -0.987 54.1-148.9-125.3 130.0 -4.0 20.1 13.8 88 83 A G - 0 0 57 -2,-0.4 2,-0.2 1,-0.2 -1,-0.1 0.840 49.4-119.0 -66.3 -40.1 -7.0 18.3 12.3 89 84 A G - 0 0 8 -14,-0.2 2,-0.6 -13,-0.1 -15,-0.3 -0.516 15.8 -77.0 123.0 173.2 -5.6 18.4 8.8 90 85 A L - 0 0 3 -17,-2.9 6,-0.1 -2,-0.2 -15,-0.0 -0.928 36.3-174.9-112.0 100.6 -6.0 19.6 5.2 91 86 A K + 0 0 126 -2,-0.6 2,-0.5 4,-0.0 -1,-0.1 0.779 61.8 76.3 -69.0 -36.6 -8.6 17.5 3.5 92 87 A K > - 0 0 128 1,-0.1 4,-1.8 -18,-0.0 3,-0.4 -0.785 69.5-148.0 -85.2 123.9 -8.4 19.0 -0.0 93 88 A E H > S+ 0 0 105 -2,-0.5 4,-3.2 1,-0.2 5,-0.2 0.822 97.3 62.8 -57.3 -34.0 -5.4 17.9 -2.1 94 89 A K H > S+ 0 0 142 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.927 105.2 43.8 -62.5 -42.9 -5.4 21.3 -3.8 95 90 A D H > S+ 0 0 32 -3,-0.4 4,-3.1 2,-0.2 -1,-0.2 0.908 114.6 51.2 -64.8 -41.2 -4.7 23.2 -0.4 96 91 A R H X S+ 0 0 30 -4,-1.8 4,-3.4 2,-0.2 5,-0.3 0.932 109.5 49.9 -61.1 -43.8 -2.1 20.6 0.5 97 92 A N H X S+ 0 0 15 -4,-3.2 4,-2.3 1,-0.2 -91,-0.5 0.927 112.6 46.0 -62.8 -49.9 -0.4 21.0 -2.9 98 93 A D H X S+ 0 0 22 -4,-2.3 4,-1.8 1,-0.2 -87,-0.3 0.897 115.0 48.0 -60.9 -43.4 -0.2 24.8 -2.6 99 94 A L H X S+ 0 0 0 -4,-3.1 4,-2.7 1,-0.2 3,-0.2 0.949 113.9 45.3 -64.3 -47.6 1.0 24.5 1.0 100 95 A I H X S+ 0 0 0 -4,-3.4 4,-2.9 1,-0.2 5,-0.2 0.882 109.4 56.9 -59.0 -37.2 3.7 21.9 0.2 101 96 A T H X S+ 0 0 8 -4,-2.3 4,-0.7 -5,-0.3 -1,-0.2 0.917 111.4 42.9 -59.2 -42.1 4.7 24.0 -2.8 102 97 A Y H X S+ 0 0 46 -4,-1.8 4,-2.6 -95,-0.3 3,-0.3 0.884 113.8 50.4 -68.0 -49.1 5.3 26.9 -0.4 103 98 A L H X S+ 0 0 5 -4,-2.7 4,-2.3 1,-0.2 -2,-0.2 0.834 103.9 57.7 -61.9 -44.6 7.1 24.8 2.2 104 99 A K H < S+ 0 0 76 -4,-2.9 -1,-0.2 1,-0.2 -2,-0.2 0.770 114.9 40.3 -56.9 -31.6 9.5 23.3 -0.3 105 100 A K H >< S+ 0 0 143 -4,-0.7 3,-0.7 -3,-0.3 -2,-0.2 0.884 117.9 41.8 -87.8 -43.7 10.6 26.8 -1.2 106 101 A A H 3< S+ 0 0 30 -4,-2.6 -79,-0.2 1,-0.2 -3,-0.2 0.781 111.9 54.2 -80.0 -27.8 10.7 28.6 2.2 107 102 A A T 3< 0 0 1 -4,-2.3 -68,-2.8 -5,-0.2 -1,-0.2 0.344 360.0 360.0 -85.7 10.4 12.3 25.8 4.1 108 103 A E < 0 0 180 -3,-0.7 -1,-0.2 -70,-0.2 -2,-0.2 0.946 360.0 360.0 -89.0 360.0 15.2 25.5 1.6