==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT(HEME PROTEIN) 26-SEP-94 1CIH . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR T.P.LO,G.D.BRAYER . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6541.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 57.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A T 0 0 123 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-130.9 5.1 11.7 -7.4 2 -4 A E + 0 0 175 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.103 360.0 88.7-145.4 17.4 1.5 12.1 -6.2 3 -3 A F - 0 0 17 93,-0.0 2,-0.4 94,-0.0 64,-0.1 -0.978 62.1-165.2-119.3 128.0 2.2 15.7 -5.3 4 -2 A K - 0 0 161 -2,-0.4 97,-0.1 -3,-0.1 -2,-0.0 -0.972 28.7-106.0-120.9 134.3 1.6 18.2 -8.1 5 -1 A A + 0 0 76 -2,-0.4 93,-0.2 1,-0.1 2,-0.1 -0.212 45.0 172.8 -60.4 149.6 3.0 21.8 -7.7 6 1 A G - 0 0 35 91,-0.6 2,-0.6 92,-0.2 -1,-0.1 -0.268 42.3 -37.6-130.0-146.0 0.6 24.5 -6.9 7 2 A S > - 0 0 51 1,-0.2 4,-1.9 -2,-0.1 95,-0.3 -0.859 35.3-167.4 -95.3 118.5 0.6 28.2 -6.0 8 3 A A H > S+ 0 0 21 -2,-0.6 4,-2.6 2,-0.2 -1,-0.2 0.766 93.9 55.9 -68.7 -34.6 3.5 29.2 -3.7 9 4 A K H > S+ 0 0 180 2,-0.2 4,-1.3 1,-0.2 -1,-0.2 0.944 111.2 42.5 -62.3 -45.3 1.6 32.5 -3.2 10 5 A K H > S+ 0 0 102 1,-0.2 4,-1.5 2,-0.2 -2,-0.2 0.917 113.0 53.7 -65.4 -38.5 -1.5 30.6 -2.1 11 6 A G H X S+ 0 0 0 -4,-1.9 4,-2.5 87,-0.3 -1,-0.2 0.871 101.4 59.6 -65.8 -39.8 0.7 28.3 0.0 12 7 A A H X S+ 0 0 19 -4,-2.6 4,-1.9 1,-0.2 -1,-0.2 0.863 109.5 42.6 -59.7 -38.1 2.3 31.3 1.8 13 8 A T H X S+ 0 0 71 -4,-1.3 4,-1.8 2,-0.2 -1,-0.2 0.753 110.3 54.4 -82.0 -23.2 -1.1 32.4 3.1 14 9 A L H X S+ 0 0 19 -4,-1.5 4,-2.4 2,-0.2 5,-0.4 0.910 109.1 51.3 -72.7 -42.0 -2.3 28.9 4.0 15 10 A F H X>S+ 0 0 5 -4,-2.5 4,-2.9 1,-0.2 5,-2.7 0.965 110.4 48.4 -56.1 -47.8 0.9 28.7 6.1 16 11 A K H <5S+ 0 0 125 -4,-1.9 5,-0.3 1,-0.2 -1,-0.2 0.944 118.6 38.2 -60.9 -43.3 0.1 31.9 7.8 17 12 A T H <5S+ 0 0 112 -4,-1.8 -1,-0.2 1,-0.1 -2,-0.2 0.670 131.2 25.0 -84.6 -19.9 -3.5 31.0 8.6 18 13 A R H <5S+ 0 0 137 -4,-2.4 -3,-0.2 -3,-0.2 -2,-0.2 0.442 132.5 20.6-122.7 -14.4 -3.0 27.3 9.5 19 14 A C T >X5S+ 0 0 21 -4,-2.9 4,-1.8 -5,-0.4 3,-1.7 0.667 97.9 79.6-126.7 -31.8 0.6 26.7 10.6 20 15 A L T 34 S- 0 0 95 1,-0.1 3,-1.9 12,-0.1 12,-0.3 -0.187 82.8 -96.9 -65.7 153.9 13.0 30.6 8.3 27 22 A K T 3 S+ 0 0 172 1,-0.3 -1,-0.1 10,-0.1 -2,-0.1 -0.454 116.7 20.4 -68.9 129.4 16.6 29.7 8.9 28 23 A G T 3 S+ 0 0 81 1,-0.3 -1,-0.3 -2,-0.1 -2,-0.1 0.538 92.7 140.7 87.9 4.6 17.3 30.8 12.5 29 24 A G < - 0 0 13 -3,-1.9 -1,-0.3 1,-0.1 7,-0.2 -0.447 52.2-108.8 -79.3 144.3 13.6 30.9 13.4 30 25 A P - 0 0 78 0, 0.0 -6,-0.2 0, 0.0 2,-0.2 -0.343 20.8-108.9 -80.7 158.4 12.7 29.7 16.9 31 26 A H + 0 0 65 4,-0.1 2,-0.2 5,-0.1 -8,-0.1 -0.606 45.1 168.9 -75.2 144.3 10.9 26.6 18.0 32 27 A K - 0 0 86 2,-3.1 -10,-0.1 -10,-0.4 -9,-0.1 -0.230 68.2 -36.5-130.5-138.8 7.4 27.5 19.3 33 28 A V S S+ 0 0 107 -12,-0.4 -10,-0.1 -2,-0.2 -11,-0.1 0.872 142.6 30.9 -55.9 -41.7 4.6 25.0 20.2 34 29 A G S S- 0 0 5 -12,-2.4 -2,-3.1 1,-0.1 -10,-0.1 -0.727 105.2 -88.0-109.7 164.4 6.0 23.1 17.2 35 30 A P - 0 0 14 0, 0.0 -11,-0.3 0, 0.0 -4,-0.1 -0.311 45.5 -95.1 -74.6 156.9 9.6 23.0 15.9 36 31 A N - 0 0 24 -7,-0.2 -11,-0.2 -13,-0.2 -5,-0.1 -0.426 34.9-149.7 -63.2 142.4 11.1 25.4 13.4 37 32 A L > + 0 0 23 -13,-2.5 3,-2.0 -2,-0.1 4,-0.2 0.383 46.8 134.2-104.7 4.7 10.7 23.7 9.9 38 33 A H T 3 S+ 0 0 45 -12,-0.3 70,-0.2 1,-0.3 69,-0.1 -0.302 81.7 9.5 -56.1 134.1 13.8 25.1 8.1 39 34 A G T 3 S+ 0 0 44 68,-3.0 -1,-0.3 -14,-0.2 4,-0.2 0.586 85.4 137.5 66.7 23.7 15.4 22.2 6.3 40 35 A I X + 0 0 25 -3,-2.0 3,-1.3 2,-0.1 24,-0.3 0.758 39.8 93.6 -69.5 -29.2 12.6 19.7 6.9 41 36 A F T 3 S+ 0 0 50 1,-0.3 24,-0.2 -4,-0.2 3,-0.1 -0.536 98.8 12.6 -71.7 129.5 12.5 18.1 3.4 42 37 A G T 3 S+ 0 0 45 22,-4.4 -1,-0.3 1,-0.4 -2,-0.1 0.052 104.9 113.5 94.0 -19.7 14.7 15.1 3.3 43 38 A A < - 0 0 37 -3,-1.3 21,-3.0 -4,-0.2 -1,-0.4 -0.336 69.1-116.0 -82.1 161.4 15.1 15.0 7.1 44 39 A H B > -A 63 0A 82 19,-0.2 3,-0.6 1,-0.1 19,-0.2 -0.663 42.3 -89.7 -92.2 157.6 13.7 12.3 9.3 45 40 A S T 3 S+ 0 0 0 17,-1.8 -1,-0.1 -2,-0.2 16,-0.1 -0.260 103.0 20.9 -65.8 146.3 10.9 13.2 11.9 46 41 A G T 3 S+ 0 0 11 1,-0.1 -1,-0.2 -3,-0.1 7,-0.1 0.835 86.2 109.9 65.5 43.2 11.9 14.3 15.4 47 42 A Q < + 0 0 129 -3,-0.6 2,-0.2 2,-0.1 -2,-0.1 0.369 31.6 120.0-126.2 1.9 15.5 15.4 14.9 48 43 A A > - 0 0 34 1,-0.1 3,-1.1 -12,-0.1 2,-0.2 -0.510 69.4-114.8 -67.5 136.9 15.5 19.2 15.2 49 44 A E T 3 S+ 0 0 188 1,-0.2 -1,-0.1 -2,-0.2 3,-0.1 -0.386 91.5 19.2 -78.5 145.8 17.8 20.0 18.1 50 45 A G T 3 S+ 0 0 79 1,-0.3 2,-0.4 -2,-0.2 -1,-0.2 0.713 94.7 115.4 78.0 18.5 16.4 21.6 21.3 51 46 A Y < - 0 0 39 -3,-1.1 2,-1.2 -5,-0.0 -1,-0.3 -0.963 62.4-136.0-117.8 137.4 12.8 20.5 20.6 52 47 A S - 0 0 91 -2,-0.4 2,-0.1 -3,-0.1 -3,-0.0 -0.617 32.8-178.8 -96.0 96.1 10.9 18.1 22.9 53 48 A Y - 0 0 39 -2,-1.2 30,-0.0 -5,-0.1 -19,-0.0 -0.472 31.0 -96.1 -87.1 164.7 9.0 15.7 20.5 54 49 A T > - 0 0 28 -2,-0.1 4,-1.4 1,-0.1 5,-0.1 -0.322 29.2-118.2 -74.4 159.6 6.7 12.9 21.3 55 50 A D H > S+ 0 0 124 1,-0.2 4,-1.9 2,-0.2 5,-0.2 0.868 114.1 61.5 -60.5 -40.2 8.1 9.3 21.5 56 51 A A H > S+ 0 0 26 26,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.837 102.1 47.1 -53.5 -48.5 5.6 8.6 18.6 57 52 A I H > S+ 0 0 14 1,-0.2 4,-0.9 2,-0.2 5,-0.4 0.862 112.6 49.4 -71.4 -31.7 7.1 11.0 16.1 58 53 A I H < S+ 0 0 72 -4,-1.4 -2,-0.2 1,-0.2 -1,-0.2 0.904 114.1 44.4 -71.5 -41.6 10.7 9.9 16.7 59 54 A K H < S+ 0 0 161 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.675 103.4 61.9 -75.9 -27.7 9.9 6.2 16.4 60 55 A K H < S- 0 0 83 -4,-1.5 -1,-0.2 -5,-0.2 -2,-0.2 0.843 86.1-168.0 -65.8 -32.1 7.7 6.6 13.3 61 56 A N < - 0 0 77 -4,-0.9 -3,-0.1 -5,-0.2 -2,-0.1 0.878 8.6-170.8 41.7 54.5 11.0 7.9 11.8 62 57 A V - 0 0 8 -5,-0.4 -17,-1.8 1,-0.1 2,-0.7 -0.361 21.8-133.2 -69.1 144.7 9.3 9.3 8.7 63 58 A L B -A 44 0A 64 -19,-0.2 2,-0.7 -2,-0.1 -19,-0.2 -0.926 28.2-127.7-103.4 113.6 11.5 10.6 5.9 64 59 A W + 0 0 10 -21,-3.0 -22,-4.4 -2,-0.7 2,-0.3 -0.509 44.8 150.3 -71.2 108.1 10.1 13.9 4.9 65 60 A D >> - 0 0 60 -2,-0.7 4,-2.8 -24,-0.2 3,-0.8 -0.853 62.9-101.5-128.3 157.2 9.4 14.3 1.2 66 61 A E H 3> S+ 0 0 50 -2,-0.3 4,-1.1 1,-0.3 34,-0.1 0.828 126.5 52.8 -47.9 -33.2 6.6 16.4 -0.4 67 62 A N H 3> S+ 0 0 41 2,-0.2 4,-1.0 1,-0.2 -1,-0.3 0.867 111.0 42.2 -69.8 -42.9 4.8 13.2 -0.8 68 63 A N H <> S+ 0 0 36 -3,-0.8 4,-2.5 2,-0.2 -2,-0.2 0.877 110.6 56.8 -68.1 -49.1 5.1 12.1 2.9 69 64 A M H X S+ 0 0 12 -4,-2.8 4,-2.4 1,-0.2 -2,-0.2 0.849 101.9 59.1 -56.9 -36.0 4.3 15.6 4.1 70 65 A S H X S+ 0 0 13 -4,-1.1 4,-1.2 -5,-0.3 -1,-0.2 0.925 106.4 44.1 -65.2 -44.8 1.1 15.4 2.2 71 66 A E H X S+ 0 0 115 -4,-1.0 4,-1.1 2,-0.2 3,-0.4 0.906 113.0 53.9 -66.7 -40.7 -0.3 12.3 4.0 72 67 A Y H >< S+ 0 0 19 -4,-2.5 3,-0.6 1,-0.2 7,-0.2 0.939 108.9 47.8 -57.2 -52.1 0.8 13.8 7.3 73 68 A L H 3< S+ 0 0 16 -4,-2.4 17,-2.4 1,-0.2 -1,-0.2 0.696 101.2 64.5 -61.8 -29.3 -1.1 17.0 6.7 74 69 A T H 3< S- 0 0 42 -4,-1.2 -1,-0.2 -3,-0.4 -2,-0.2 0.863 133.6 -12.6 -60.7 -39.4 -4.3 15.2 5.6 75 70 A N S+ 0 0 0 0, 0.0 4,-2.0 0, 0.0 3,-0.1 0.881 87.6 43.2 -47.6 -55.7 -1.7 14.1 11.4 77 72 A X H 4 S+ 0 0 149 10,-0.4 6,-0.2 1,-0.2 5,-0.1 0.769 112.1 53.1 -68.6 -30.3 -2.9 11.8 14.2 78 73 A K H 4 S+ 0 0 175 1,-0.2 -1,-0.2 -6,-0.1 -6,-0.1 0.869 114.7 44.1 -70.9 -37.4 -4.2 9.1 11.8 79 74 A Y H < S+ 0 0 53 -4,-2.1 -2,-0.2 1,-0.3 -1,-0.2 0.815 131.6 19.6 -74.5 -35.2 -0.7 9.2 10.2 80 75 A I S >< S- 0 0 2 -4,-2.0 3,-2.4 -5,-0.2 -1,-0.3 -0.807 81.5-152.3-137.8 86.2 1.4 9.2 13.4 81 76 A P T 3 S+ 0 0 99 0, 0.0 -3,-0.1 0, 0.0 3,-0.1 -0.467 85.4 32.4 -62.6 131.1 -0.8 7.9 16.3 82 77 A G T 3 S+ 0 0 55 1,-0.4 -26,-0.2 -2,-0.1 -25,-0.2 0.182 83.1 138.3 105.4 -14.0 0.5 9.6 19.4 83 78 A T < - 0 0 5 -3,-2.4 -1,-0.4 -6,-0.2 -3,-0.1 -0.366 48.7-147.0 -63.3 147.0 1.7 12.8 17.8 84 79 A K + 0 0 99 -3,-0.1 2,-0.7 2,-0.1 -1,-0.1 0.345 59.6 122.7 -93.8 5.2 0.9 15.9 19.9 85 80 A M - 0 0 41 1,-0.1 2,-0.8 -9,-0.0 -8,-0.2 -0.658 51.5-157.3 -72.8 114.9 0.4 18.1 16.7 86 81 A A + 0 0 86 -2,-0.7 2,-0.4 -10,-0.1 -1,-0.1 -0.448 47.9 124.2 -98.0 57.3 -3.1 19.4 17.3 87 82 A S - 0 0 44 -2,-0.8 -10,-0.4 1,-0.1 3,-0.1 -0.895 52.2-151.9-112.1 133.7 -3.9 20.1 13.7 88 83 A G - 0 0 55 -2,-0.4 -1,-0.1 1,-0.2 -2,-0.0 0.379 52.2-104.5 -93.1 0.4 -7.1 18.4 12.4 89 84 A G - 0 0 5 -14,-0.1 2,-0.8 1,-0.1 -15,-0.3 0.158 14.4 -90.5 92.3 158.3 -5.7 18.3 8.8 90 85 A L - 0 0 14 -17,-2.4 6,-0.1 -20,-0.2 -1,-0.1 -0.932 39.0-175.1-100.3 94.5 -5.9 19.8 5.3 91 86 A K + 0 0 127 -2,-0.8 2,-0.5 4,-0.1 -1,-0.1 0.764 57.3 79.4 -74.4 -27.9 -8.5 17.6 3.6 92 87 A K > - 0 0 122 1,-0.1 4,-2.2 4,-0.0 3,-0.4 -0.674 68.0-148.3 -88.8 127.7 -8.3 19.1 0.1 93 88 A E H > S+ 0 0 106 -2,-0.5 4,-3.2 1,-0.2 5,-0.2 0.899 99.0 59.7 -55.7 -40.0 -5.5 18.0 -2.1 94 89 A K H > S+ 0 0 147 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.898 107.5 45.9 -58.9 -41.9 -5.4 21.4 -3.8 95 90 A D H > S+ 0 0 36 -3,-0.4 4,-3.0 2,-0.2 -1,-0.2 0.889 113.1 49.2 -66.8 -42.4 -4.7 23.1 -0.4 96 91 A R H X S+ 0 0 31 -4,-2.2 4,-3.0 2,-0.2 5,-0.3 0.906 110.7 51.6 -62.3 -42.7 -2.0 20.5 0.5 97 92 A N H X S+ 0 0 14 -4,-3.2 4,-2.0 2,-0.2 -91,-0.6 0.907 112.3 44.5 -60.4 -50.2 -0.4 21.0 -2.9 98 93 A D H X S+ 0 0 22 -4,-2.0 4,-2.2 2,-0.2 -87,-0.3 0.930 115.0 49.2 -60.2 -50.9 -0.2 24.8 -2.6 99 94 A L H X S+ 0 0 1 -4,-3.0 4,-2.4 1,-0.2 -2,-0.2 0.932 112.7 46.4 -56.6 -51.3 1.0 24.6 1.0 100 95 A I H X S+ 0 0 0 -4,-3.0 4,-3.2 1,-0.2 5,-0.3 0.809 108.0 57.2 -58.7 -35.9 3.8 22.0 0.1 101 96 A T H X S+ 0 0 11 -4,-2.0 4,-1.3 -5,-0.3 -1,-0.2 0.961 111.7 42.7 -60.5 -47.6 4.8 24.1 -2.8 102 97 A Y H X S+ 0 0 35 -4,-2.2 4,-2.7 -95,-0.3 -2,-0.2 0.884 115.2 47.7 -61.6 -48.7 5.3 27.0 -0.5 103 98 A L H X S+ 0 0 5 -4,-2.4 4,-2.3 2,-0.2 -2,-0.2 0.878 105.9 58.7 -63.2 -46.6 7.1 24.9 2.2 104 99 A K H < S+ 0 0 83 -4,-3.2 -1,-0.2 1,-0.2 4,-0.2 0.867 115.2 38.9 -46.7 -44.7 9.4 23.3 -0.4 105 100 A K H >< S+ 0 0 111 -4,-1.3 3,-0.6 -5,-0.3 -2,-0.2 0.931 118.4 41.8 -75.5 -49.5 10.5 26.8 -1.2 106 101 A A H 3< S+ 0 0 27 -4,-2.7 -2,-0.2 1,-0.2 -3,-0.2 0.704 109.2 57.8 -78.2 -22.9 10.7 28.6 2.2 107 102 A A T 3< 0 0 1 -4,-2.3 -68,-3.0 -5,-0.2 -1,-0.2 0.456 360.0 360.0 -85.0 -6.1 12.3 25.7 4.1 108 103 A E < 0 0 178 -3,-0.6 -1,-0.2 -4,-0.2 -2,-0.2 0.920 360.0 360.0 -80.9 360.0 15.3 25.6 1.7