==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/DNA 05-APR-99 1CIT . COMPND 2 MOLECULE: DNA (5'- . SOURCE 2 SYNTHETIC: YES; . AUTHOR G.MEINKE,P.B.SIGLER . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6563.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 46 51.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 4.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 21 23.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 230 A G 0 0 88 0, 0.0 8,-0.2 0, 0.0 7,-0.2 0.000 360.0 360.0 360.0-178.2 -16.4 -13.8 7.0 2 231 A R + 0 0 157 6,-2.0 2,-0.4 5,-0.2 7,-0.2 0.508 360.0 111.1-129.8 -14.9 -14.0 -12.4 9.5 3 232 A C - 0 0 6 5,-3.0 4,-0.4 1,-0.2 16,-0.2 -0.507 59.2-148.1 -67.0 123.5 -16.1 -10.4 11.9 4 233 A A S S+ 0 0 45 14,-2.4 -1,-0.2 -2,-0.4 15,-0.1 0.492 90.3 43.7 -71.3 -2.1 -16.1 -12.3 15.2 5 234 A V S S+ 0 0 3 13,-0.2 -1,-0.1 3,-0.1 42,-0.1 0.836 133.6 2.7-107.5 -62.5 -19.6 -11.0 15.9 6 235 A C S S- 0 0 9 42,-0.1 43,-1.4 43,-0.1 44,-0.2 0.654 92.8-119.4 -99.7 -20.5 -21.9 -11.2 13.0 7 236 A G + 0 0 32 -4,-0.4 -5,-0.2 41,-0.2 -4,-0.1 0.388 64.5 141.2 97.4 -3.3 -19.4 -12.8 10.6 8 237 A D - 0 0 22 -7,-0.2 -5,-3.0 -6,-0.2 -6,-2.0 0.094 65.4 -69.3 -57.8-176.9 -19.5 -9.9 8.1 9 238 A N - 0 0 120 -8,-0.2 2,-0.4 -7,-0.2 12,-0.3 -0.562 54.4-170.7 -79.8 143.5 -16.3 -8.9 6.4 10 239 A A - 0 0 14 -2,-0.2 10,-0.2 10,-0.1 3,-0.1 -0.997 22.1-177.0-138.2 141.2 -13.7 -7.2 8.6 11 240 A S - 0 0 97 8,-0.4 2,-0.3 -2,-0.4 -1,-0.1 0.658 68.7 -9.7-109.0 -23.2 -10.4 -5.4 7.8 12 241 A C E S-A 19 0A 57 7,-0.5 7,-1.2 5,-0.1 -1,-0.2 -0.907 82.9 -56.5-158.4-172.2 -9.1 -4.5 11.2 13 242 A Q E -A 18 0A 115 -2,-0.3 2,-0.3 5,-0.2 5,-0.2 -0.464 35.6-174.2 -81.1 148.5 -9.6 -4.3 15.0 14 243 A H E > S-A 17 0A 24 3,-1.5 3,-2.0 -2,-0.2 55,-0.1 -0.943 74.1 -18.1-145.1 117.9 -12.4 -2.3 16.8 15 244 A Y T 3 S- 0 0 41 -2,-0.3 54,-2.7 1,-0.3 57,-0.1 0.916 133.1 -46.1 50.3 46.7 -12.6 -2.0 20.5 16 245 A G T 3 S+ 0 0 48 52,-0.2 2,-0.4 1,-0.1 -1,-0.3 0.227 123.6 87.9 85.4 -11.8 -10.2 -4.9 20.9 17 246 A V E < S-A 14 0A 15 -3,-2.0 -3,-1.5 52,-0.1 2,-0.7 -0.958 83.5-107.5-131.7 141.2 -11.9 -7.3 18.4 18 247 A R E +A 13 0A 77 -2,-0.4 -14,-2.4 -5,-0.2 2,-0.3 -0.391 63.6 156.3 -56.8 103.3 -11.8 -8.0 14.6 19 248 A T E -A 12 0A 1 -7,-1.2 -7,-0.5 -2,-0.7 -8,-0.4 -0.881 41.2-113.9-135.4 167.3 -15.1 -6.5 13.7 20 249 A C > - 0 0 5 -2,-0.3 4,-3.3 -10,-0.2 -10,-0.1 -0.503 37.9-103.4 -94.9 166.4 -17.0 -5.0 10.8 21 250 A E H > S+ 0 0 123 -12,-0.3 4,-1.9 2,-0.2 5,-0.2 0.794 120.7 58.6 -59.1 -29.2 -18.2 -1.5 10.4 22 251 A G H > S+ 0 0 24 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 1.000 113.6 32.4 -64.0 -67.7 -21.6 -2.7 11.3 23 252 A C H > S+ 0 0 0 1,-0.2 4,-2.7 2,-0.2 5,-0.3 0.847 112.7 68.9 -58.1 -32.6 -20.8 -4.1 14.7 24 253 A K H X S+ 0 0 58 -4,-3.3 4,-2.0 1,-0.2 -1,-0.2 0.968 107.4 33.4 -46.4 -70.5 -18.2 -1.4 15.0 25 254 A G H X S+ 0 0 9 -4,-1.9 4,-2.9 1,-0.2 5,-0.4 0.827 113.2 61.0 -58.4 -37.1 -20.7 1.4 15.3 26 255 A F H X S+ 0 0 7 -4,-2.0 4,-2.4 -5,-0.2 5,-0.2 0.965 107.5 45.1 -56.1 -52.4 -23.3 -0.7 17.2 27 256 A F H X S+ 0 0 0 -4,-2.7 4,-2.6 2,-0.2 -1,-0.2 0.921 115.9 48.8 -56.6 -46.2 -20.8 -1.2 20.0 28 257 A K H X S+ 0 0 80 -4,-2.0 4,-3.1 -5,-0.3 -2,-0.2 0.987 112.2 43.2 -59.2 -65.9 -19.9 2.5 20.0 29 258 A R H X S+ 0 0 124 -4,-2.9 4,-2.4 1,-0.2 6,-0.4 0.915 115.3 52.6 -46.7 -48.8 -23.4 4.1 20.0 30 259 A T H X>S+ 0 0 2 -4,-2.4 5,-1.6 -5,-0.4 4,-1.1 0.960 112.6 42.8 -52.5 -57.9 -24.5 1.5 22.6 31 260 A V H <5S+ 0 0 25 -4,-2.6 -1,-0.2 -5,-0.2 -2,-0.2 0.871 116.8 47.2 -59.9 -40.6 -21.6 2.3 24.9 32 261 A Q H <5S+ 0 0 95 -4,-3.1 -2,-0.2 1,-0.2 -3,-0.2 0.998 118.0 39.1 -63.7 -68.4 -21.8 6.1 24.4 33 262 A K H <5S- 0 0 158 -4,-2.4 -1,-0.2 -5,-0.2 -2,-0.2 0.628 103.7-134.4 -56.4 -11.0 -25.6 6.3 24.9 34 263 A S T <5 - 0 0 96 -4,-1.1 -3,-0.2 -5,-0.3 -1,-0.1 0.809 37.0-169.1 59.2 27.7 -25.1 3.7 27.7 35 264 A A < - 0 0 36 -5,-1.6 2,-0.5 -6,-0.4 -1,-0.1 -0.096 15.9-146.9 -52.0 144.7 -28.1 2.0 26.1 36 265 A K - 0 0 96 -3,-0.1 2,-0.2 2,-0.0 -1,-0.1 -0.974 17.2-164.1-118.4 118.1 -29.8 -0.9 27.9 37 266 A Y - 0 0 49 -2,-0.5 2,-0.3 20,-0.1 18,-0.0 -0.552 7.0-155.3 -99.7 167.0 -31.3 -3.6 25.8 38 267 A I - 0 0 143 -2,-0.2 2,-0.5 0, 0.0 19,-0.3 -0.991 15.2-131.5-144.1 132.0 -33.7 -6.3 26.5 39 268 A C - 0 0 14 -2,-0.3 16,-0.1 1,-0.2 -2,-0.0 -0.741 8.0-163.0 -89.7 124.9 -34.2 -9.7 24.7 40 269 A L S S+ 0 0 174 -2,-0.5 -1,-0.2 2,-0.1 15,-0.0 0.842 83.3 39.7 -72.0 -34.5 -37.7 -10.6 23.8 41 270 A A S S- 0 0 54 1,-0.0 -2,-0.1 0, 0.0 14,-0.0 0.609 122.8 -61.9 -83.3-122.2 -36.8 -14.2 23.3 42 271 A N S S- 0 0 146 0, 0.0 -2,-0.1 0, 0.0 -1,-0.0 -0.216 70.7 -93.5-129.8 45.8 -34.4 -16.1 25.5 43 272 A K S S+ 0 0 101 1,-0.1 -4,-0.0 0, 0.0 -3,-0.0 0.810 108.4 86.3 51.1 38.8 -31.1 -14.2 25.2 44 273 A D + 0 0 140 2,-0.0 3,-0.1 0, 0.0 -1,-0.1 0.142 51.4 154.4-152.6 25.7 -29.7 -16.5 22.5 45 274 A C - 0 0 32 1,-0.1 2,-0.4 7,-0.0 6,-0.0 -0.081 57.0 -85.0 -54.5 155.3 -31.0 -15.1 19.2 46 275 A P - 0 0 69 0, 0.0 2,-0.8 0, 0.0 8,-0.2 -0.510 40.8-163.6 -70.9 122.8 -29.1 -15.7 16.0 47 276 A V + 0 0 29 -2,-0.4 2,-0.3 -3,-0.1 5,-0.1 -0.844 36.7 122.2-110.9 96.8 -26.3 -13.2 15.5 48 277 A D S > S- 0 0 30 -2,-0.8 4,-0.8 -41,-0.1 -41,-0.2 -0.846 78.2 -82.0-141.0 176.8 -25.0 -13.3 12.0 49 278 A K T 4 S+ 0 0 115 -43,-1.4 4,-0.1 -2,-0.3 -42,-0.1 0.759 126.4 42.3 -55.8 -27.6 -24.7 -10.9 9.1 50 279 A R T 4 S+ 0 0 180 -44,-0.2 -1,-0.2 1,-0.1 3,-0.2 0.799 124.0 30.0 -93.2 -31.3 -28.4 -11.3 8.2 51 280 A R T >> S+ 0 0 95 -3,-0.2 3,-0.5 1,-0.1 4,-0.5 0.074 82.7 109.4-116.4 24.5 -30.2 -11.3 11.5 52 281 A R T 3< S+ 0 0 33 -4,-0.8 7,-0.2 1,-0.2 3,-0.1 0.733 82.2 48.1 -72.1 -20.9 -27.9 -9.1 13.6 53 282 A N T 34 S+ 0 0 118 -3,-0.2 -1,-0.2 1,-0.2 3,-0.2 0.529 88.6 81.4 -96.1 -8.5 -30.4 -6.3 13.7 54 283 A R T <4 S+ 0 0 210 -3,-0.5 2,-0.4 1,-0.2 -1,-0.2 0.877 107.0 21.8 -64.7 -35.6 -33.4 -8.4 14.7 55 284 A C X - 0 0 23 -4,-0.5 4,-0.7 -9,-0.2 -1,-0.2 -0.983 60.0-171.7-137.3 126.7 -32.3 -8.3 18.3 56 285 A Q H >> S+ 0 0 104 -2,-0.4 4,-2.5 -18,-0.2 3,-1.2 0.975 83.8 56.7 -78.7 -59.3 -30.0 -5.7 19.9 57 286 A F H 3> S+ 0 0 42 -19,-0.3 4,-3.2 1,-0.3 5,-0.2 0.885 109.6 48.0 -35.9 -58.7 -29.4 -7.2 23.4 58 287 A C H 3> S+ 0 0 3 1,-0.2 4,-2.0 2,-0.2 -1,-0.3 0.817 109.7 52.4 -57.1 -35.0 -28.1 -10.4 21.9 59 288 A R H S+ 0 0 0 -4,-2.0 5,-2.1 1,-0.2 -1,-0.2 0.896 111.7 38.3 -48.1 -42.6 -19.9 -8.1 21.3 64 293 A L H ><5S+ 0 0 68 -4,-2.1 3,-2.5 3,-0.2 -1,-0.2 0.894 109.6 60.9 -76.2 -41.0 -18.8 -8.6 24.9 65 294 A A H 3<5S+ 0 0 81 -4,-2.4 -2,-0.2 1,-0.3 -1,-0.2 0.922 107.6 44.8 -52.2 -47.9 -18.5 -12.3 24.7 66 295 A V T 3<5S- 0 0 46 -4,-3.0 -1,-0.3 -5,-0.1 -2,-0.2 0.364 127.9-105.4 -79.4 7.3 -15.9 -12.0 22.0 67 296 A G T < 5 + 0 0 39 -3,-2.5 2,-0.4 -5,-0.2 -3,-0.2 0.885 49.7 175.4 77.4 45.2 -14.3 -9.3 24.2 68 297 A M < - 0 0 6 -5,-2.1 2,-0.7 -6,-0.1 -52,-0.2 -0.692 33.4-125.3 -81.0 131.1 -15.0 -5.8 22.8 69 298 A V > - 0 0 47 -54,-2.7 3,-1.3 -2,-0.4 4,-0.3 -0.697 19.1-166.7 -86.8 114.3 -13.7 -3.3 25.3 70 299 A K G > S+ 0 0 112 -2,-0.7 3,-1.0 1,-0.3 -1,-0.2 0.745 88.7 64.9 -63.2 -26.2 -16.2 -0.7 26.5 71 300 A E G 3 S+ 0 0 173 1,-0.2 -1,-0.3 -56,-0.1 4,-0.1 0.736 89.4 65.7 -71.0 -23.7 -13.3 1.3 27.9 72 301 A V G < S+ 0 0 74 -3,-1.3 2,-1.1 -57,-0.1 -1,-0.2 0.617 75.8 97.7 -76.0 -11.7 -11.9 1.9 24.5 73 302 A V S < S- 0 0 5 -3,-1.0 5,-0.1 -4,-0.3 6,-0.1 -0.683 86.0-121.7 -79.8 103.0 -14.9 4.0 23.5 74 303 A R + 0 0 71 -2,-1.1 2,-0.3 7,-0.1 6,-0.2 -0.047 43.4 163.1 -46.4 144.2 -13.6 7.5 24.1 75 304 A T > + 0 0 71 4,-0.1 3,-2.5 -4,-0.1 4,-0.1 -0.922 42.1 8.7-153.7 174.4 -15.5 9.6 26.6 76 305 A D G > S+ 0 0 130 1,-0.3 3,-3.4 -2,-0.3 -2,-0.0 -0.173 133.9 6.5 48.9-132.4 -15.2 12.7 28.7 77 306 A S G 3 S+ 0 0 128 1,-0.3 -1,-0.3 3,-0.1 -3,-0.1 0.772 138.2 52.1 -48.4 -29.4 -12.0 14.6 27.8 78 307 A L G X S+ 0 0 67 -3,-2.5 3,-1.7 2,-0.1 -1,-0.3 0.432 79.9 122.8 -90.5 0.2 -11.6 12.1 25.0 79 308 A K T < S+ 0 0 171 -3,-3.4 -4,-0.1 1,-0.3 3,-0.1 -0.428 82.7 11.1 -65.2 131.4 -15.1 12.6 23.6 80 309 A G T 3 S+ 0 0 75 1,-0.3 2,-0.4 -6,-0.2 -1,-0.3 0.280 94.8 136.1 85.2 -11.3 -15.0 13.7 20.0 81 310 A R < - 0 0 104 -3,-1.7 -1,-0.3 1,-0.1 -7,-0.1 -0.558 36.2-165.0 -74.8 125.5 -11.3 12.9 19.8 82 311 A R + 0 0 219 -2,-0.4 -1,-0.1 -3,-0.1 -3,-0.0 -0.371 37.5 22.0-103.5-177.9 -10.3 11.0 16.7 83 312 A G S S- 0 0 56 -2,-0.1 2,-0.1 2,-0.0 -2,-0.0 0.190 98.8 -27.3 56.5-175.2 -7.3 9.0 15.5 84 313 A R - 0 0 227 1,-0.1 -2,-0.1 0, 0.0 0, 0.0 -0.432 61.6-125.0 -73.1 142.4 -4.7 7.2 17.4 85 314 A L - 0 0 70 -2,-0.1 2,-0.3 1,-0.1 -1,-0.1 -0.384 35.6 -95.4 -80.4 163.7 -3.7 8.4 20.8 86 315 A P + 0 0 106 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.612 41.7 167.5 -85.1 144.4 -0.0 9.3 21.6 87 316 A S + 0 0 123 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 0.559 56.0 72.8-125.6 -22.8 2.3 6.7 23.1 88 317 A K 0 0 77 1,-0.1 -1,-0.1 0, 0.0 0, 0.0 -0.857 360.0 360.0-108.4 133.2 5.8 8.2 22.7 89 318 A P 0 0 201 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.831 360.0 360.0 -54.2 360.0 7.3 11.2 24.6