==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER NUCLEAR PROTEIN 24-APR-06 2CKX . COMPND 2 MOLECULE: TELOMERE BINDING PROTEIN TBP1; . SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; . AUTHOR J.-S.BYUN, H.-S.CHO . 83 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5203.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 66.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 47 56.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 578 A R 0 0 248 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 167.0 -12.3 72.6 5.2 2 579 A P - 0 0 96 0, 0.0 2,-0.3 0, 0.0 60,-0.0 -0.169 360.0-115.1 -53.7 138.8 -9.1 74.3 3.9 3 580 A F - 0 0 20 4,-0.1 60,-0.1 60,-0.1 2,-0.1 -0.584 28.1-133.4 -74.4 134.5 -6.3 74.9 6.4 4 581 A S > - 0 0 50 -2,-0.3 4,-2.6 1,-0.1 5,-0.2 -0.400 26.7-106.3 -79.9 167.8 -5.7 78.6 6.9 5 582 A V H > S+ 0 0 48 1,-0.2 4,-3.2 2,-0.2 5,-0.2 0.870 123.8 56.8 -63.1 -34.3 -2.1 79.7 6.8 6 583 A A H > S+ 0 0 72 1,-0.2 4,-2.9 2,-0.2 -1,-0.2 0.913 109.4 44.9 -61.9 -43.4 -2.3 80.1 10.6 7 584 A E H > S+ 0 0 29 2,-0.2 4,-3.1 1,-0.2 -2,-0.2 0.877 111.6 52.5 -67.8 -39.4 -3.4 76.5 10.9 8 585 A V H X S+ 0 0 4 -4,-2.6 4,-3.4 2,-0.2 -2,-0.2 0.952 113.4 44.4 -60.8 -46.6 -0.7 75.4 8.5 9 586 A E H X S+ 0 0 81 -4,-3.2 4,-3.4 2,-0.2 5,-0.2 0.927 112.3 51.2 -64.3 -42.5 1.8 77.3 10.7 10 587 A A H X S+ 0 0 28 -4,-2.9 4,-2.6 1,-0.2 -1,-0.2 0.922 114.2 45.4 -58.7 -43.6 0.3 75.9 13.9 11 588 A L H X S+ 0 0 0 -4,-3.1 4,-3.0 2,-0.2 5,-0.2 0.937 113.5 48.2 -65.2 -47.9 0.6 72.5 12.4 12 589 A V H X S+ 0 0 0 -4,-3.4 4,-3.0 2,-0.2 -2,-0.2 0.925 113.2 48.3 -59.3 -44.1 4.1 73.0 11.1 13 590 A E H X S+ 0 0 52 -4,-3.4 4,-2.6 2,-0.2 -1,-0.2 0.932 112.4 48.9 -61.8 -45.5 5.2 74.4 14.5 14 591 A A H X S+ 0 0 0 -4,-2.6 4,-3.9 -5,-0.2 5,-0.4 0.917 113.2 46.5 -60.7 -44.7 3.6 71.5 16.3 15 592 A V H X S+ 0 0 0 -4,-3.0 4,-2.9 2,-0.2 -1,-0.2 0.902 109.2 54.6 -66.4 -40.2 5.3 69.0 13.9 16 593 A E H < S+ 0 0 58 -4,-3.0 -2,-0.2 -5,-0.2 -1,-0.2 0.956 119.5 34.3 -56.7 -45.6 8.6 70.8 14.4 17 594 A H H < S+ 0 0 111 -4,-2.6 -2,-0.2 -5,-0.2 -1,-0.2 0.883 133.5 25.8 -77.0 -37.6 8.2 70.4 18.1 18 595 A L H < S- 0 0 24 -4,-3.9 3,-0.4 1,-0.3 -3,-0.2 0.632 97.3-134.7-104.1 -17.3 6.5 67.0 18.2 19 596 A G < - 0 0 1 -4,-2.9 3,-0.3 -5,-0.4 -1,-0.3 -0.467 37.1 -64.0 94.2-168.8 7.5 65.3 15.1 20 597 A T S S+ 0 0 52 1,-0.2 -1,-0.2 -2,-0.1 3,-0.1 0.101 121.3 58.1-111.2 19.4 5.4 63.3 12.7 21 598 A G S S+ 0 0 67 -3,-0.4 -1,-0.2 -6,-0.1 3,-0.1 0.183 89.1 70.7-132.8 16.6 4.2 60.5 14.8 22 599 A R > + 0 0 122 -3,-0.3 4,-2.6 1,-0.1 3,-0.4 -0.404 49.8 150.9-131.1 55.8 2.4 62.3 17.6 23 600 A W H > S+ 0 0 19 1,-0.3 4,-3.0 2,-0.2 5,-0.2 0.829 72.5 54.8 -60.1 -34.7 -0.7 63.6 15.9 24 601 A R H > S+ 0 0 149 2,-0.2 4,-2.4 1,-0.2 -1,-0.3 0.888 112.4 45.0 -67.0 -34.6 -2.8 63.5 19.0 25 602 A D H > S+ 0 0 53 -3,-0.4 4,-2.8 2,-0.2 -2,-0.2 0.883 111.0 52.7 -74.4 -36.6 -0.2 65.7 20.7 26 603 A V H X>S+ 0 0 0 -4,-2.6 4,-3.0 2,-0.2 5,-0.5 0.932 110.6 48.9 -61.8 -43.8 0.0 67.9 17.6 27 604 A K H X5S+ 0 0 39 -4,-3.0 4,-3.1 1,-0.2 -2,-0.2 0.952 112.7 46.2 -59.4 -49.8 -3.7 68.3 17.9 28 605 A M H <5S+ 0 0 115 -4,-2.4 4,-0.4 3,-0.2 -1,-0.2 0.871 116.2 47.2 -60.7 -37.8 -3.6 69.1 21.5 29 606 A R H <5S+ 0 0 118 -4,-2.8 -2,-0.2 -5,-0.1 -1,-0.2 0.931 134.1 6.7 -71.2 -47.1 -0.7 71.5 20.9 30 607 A A H <5S+ 0 0 30 -4,-3.0 -3,-0.2 -5,-0.2 -2,-0.2 0.531 136.8 33.4-118.3 -7.8 -2.1 73.4 18.0 31 608 A F ><< + 0 0 5 -4,-3.1 3,-1.8 -5,-0.5 6,-0.2 0.011 67.4 132.3-139.8 32.8 -5.7 72.3 17.3 32 609 A D T 3 S+ 0 0 107 -4,-0.4 -4,-0.1 1,-0.3 -3,-0.1 0.838 83.5 34.9 -55.3 -39.8 -7.0 71.6 20.8 33 610 A N T 3 S+ 0 0 147 1,-0.1 2,-0.6 -6,-0.1 -1,-0.3 0.048 95.9 94.1-104.4 23.3 -10.2 73.6 20.2 34 611 A A X + 0 0 9 -3,-1.8 3,-2.4 3,-0.2 -1,-0.1 -0.743 46.2 176.6-116.5 83.2 -10.6 72.8 16.5 35 612 A D T 3 S+ 0 0 139 -2,-0.6 -1,-0.2 1,-0.3 -3,-0.0 0.790 80.0 61.0 -55.9 -30.0 -12.9 69.7 16.5 36 613 A H T 3 S+ 0 0 107 1,-0.2 2,-0.7 -3,-0.1 -1,-0.3 0.562 94.5 70.5 -75.1 -7.5 -12.9 69.8 12.7 37 614 A R S < S- 0 0 9 -3,-2.4 -3,-0.2 -6,-0.2 -1,-0.2 -0.809 72.6-176.3-111.0 87.6 -9.2 69.3 12.8 38 615 A T > - 0 0 54 -2,-0.7 4,-2.3 1,-0.1 5,-0.2 -0.366 43.0-106.3 -78.8 165.8 -8.7 65.7 14.0 39 616 A Y H > S+ 0 0 75 1,-0.2 4,-2.5 2,-0.2 5,-0.1 0.842 125.6 54.3 -61.2 -30.6 -5.3 64.3 14.6 40 617 A V H > S+ 0 0 46 2,-0.2 4,-3.2 1,-0.2 -1,-0.2 0.912 105.2 51.8 -68.8 -41.6 -5.8 62.4 11.4 41 618 A D H > S+ 0 0 57 1,-0.2 4,-3.3 2,-0.2 -2,-0.2 0.905 111.4 48.5 -58.8 -40.7 -6.6 65.6 9.5 42 619 A L H X S+ 0 0 0 -4,-2.3 4,-2.9 2,-0.2 -2,-0.2 0.910 111.3 48.1 -66.3 -44.4 -3.4 67.0 10.9 43 620 A K H X S+ 0 0 85 -4,-2.5 4,-2.2 2,-0.2 -2,-0.2 0.931 115.5 45.8 -60.4 -46.3 -1.4 64.0 9.9 44 621 A D H X S+ 0 0 80 -4,-3.2 4,-2.5 2,-0.2 -2,-0.2 0.939 112.7 49.1 -63.5 -46.6 -2.9 64.1 6.5 45 622 A K H X S+ 0 0 47 -4,-3.3 4,-2.8 1,-0.2 -1,-0.2 0.916 109.8 52.1 -59.9 -43.8 -2.4 67.8 6.1 46 623 A W H X S+ 0 0 12 -4,-2.9 4,-2.7 1,-0.2 -1,-0.2 0.915 108.2 52.2 -58.0 -42.7 1.2 67.4 7.2 47 624 A K H X S+ 0 0 148 -4,-2.2 4,-2.3 1,-0.2 -2,-0.2 0.935 111.9 45.2 -58.4 -47.2 1.6 64.8 4.6 48 625 A T H X S+ 0 0 62 -4,-2.5 4,-3.4 1,-0.2 -1,-0.2 0.851 111.2 53.7 -67.2 -33.8 0.2 67.1 1.9 49 626 A L H X S+ 0 0 1 -4,-2.8 4,-3.4 2,-0.2 5,-0.2 0.928 108.6 48.7 -65.5 -44.3 2.4 69.9 3.2 50 627 A V H X S+ 0 0 14 -4,-2.7 4,-2.0 2,-0.2 -2,-0.2 0.923 114.3 46.8 -60.4 -43.5 5.5 67.8 2.9 51 628 A H H X S+ 0 0 112 -4,-2.3 4,-2.1 2,-0.2 -2,-0.2 0.967 113.8 47.2 -62.7 -51.6 4.4 66.9 -0.6 52 629 A T H < S+ 0 0 23 -4,-3.4 -2,-0.2 1,-0.2 -1,-0.2 0.919 114.9 46.2 -54.4 -47.4 3.6 70.5 -1.5 53 630 A A H < S+ 0 0 6 -4,-3.4 -1,-0.2 1,-0.2 -2,-0.2 0.802 113.8 50.6 -66.9 -28.6 7.0 71.7 -0.0 54 631 A S H < S+ 0 0 70 -4,-2.0 -1,-0.2 -5,-0.2 -2,-0.2 0.760 100.7 70.8 -83.2 -25.4 8.8 68.9 -1.8 55 632 A I S < S- 0 0 32 -4,-2.1 5,-0.1 -3,-0.2 0, 0.0 -0.456 95.2 -88.5 -90.8 165.5 7.4 69.5 -5.3 56 633 A A >> - 0 0 46 -2,-0.1 3,-2.1 1,-0.1 4,-0.8 -0.377 40.0-109.4 -69.4 150.1 8.1 72.3 -7.6 57 634 A P G >4 S+ 0 0 89 0, 0.0 3,-1.5 0, 0.0 -1,-0.1 0.871 118.8 58.8 -45.0 -44.9 6.0 75.4 -7.3 58 635 A Q G 34 S+ 0 0 148 1,-0.3 -2,-0.0 3,-0.0 -3,-0.0 0.742 104.4 51.3 -60.4 -25.4 4.3 74.6 -10.6 59 636 A Q G <4 S+ 0 0 104 -3,-2.1 -1,-0.3 -7,-0.1 2,-0.1 0.605 89.2 103.6 -87.0 -13.7 3.2 71.3 -9.3 60 637 A R << - 0 0 54 -3,-1.5 2,-0.3 -4,-0.8 -8,-0.0 -0.408 48.7-175.6 -73.7 146.2 1.6 72.8 -6.2 61 638 A R + 0 0 178 2,-0.1 -2,-0.1 -2,-0.1 2,-0.0 -0.837 41.8 36.7-133.1 170.4 -2.1 73.2 -5.9 62 639 A G S S- 0 0 70 -2,-0.3 3,-0.1 2,-0.1 -2,-0.0 -0.250 109.0 -13.2 79.3-173.2 -4.5 74.6 -3.4 63 640 A E S S- 0 0 113 1,-0.1 -2,-0.1 -60,-0.1 -60,-0.1 -0.362 82.7-106.9 -62.1 133.8 -3.8 77.8 -1.4 64 641 A P - 0 0 111 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.383 29.1-138.7 -63.4 138.7 -0.1 78.8 -1.7 65 642 A V - 0 0 19 -3,-0.1 5,-0.1 1,-0.1 -60,-0.0 -0.857 30.6-100.5 -99.0 132.5 1.8 78.1 1.5 66 643 A P >> - 0 0 45 0, 0.0 4,-2.1 0, 0.0 3,-0.9 -0.212 31.0-122.4 -49.8 139.9 4.2 80.8 2.5 67 644 A Q H 3> S+ 0 0 96 1,-0.3 4,-3.5 2,-0.2 5,-0.2 0.867 110.9 58.2 -55.0 -40.8 7.7 79.8 1.5 68 645 A D H 3> S+ 0 0 88 1,-0.2 4,-1.7 2,-0.2 -1,-0.3 0.846 108.5 47.8 -61.6 -29.9 9.1 80.1 5.0 69 646 A L H <> S+ 0 0 1 -3,-0.9 4,-2.7 2,-0.2 -1,-0.2 0.902 111.3 48.5 -75.9 -41.3 6.5 77.5 6.0 70 647 A L H X S+ 0 0 3 -4,-2.1 4,-2.8 2,-0.2 5,-0.2 0.933 111.3 51.5 -62.9 -42.5 7.3 75.2 3.2 71 648 A D H X S+ 0 0 86 -4,-3.5 4,-2.7 1,-0.2 -1,-0.2 0.918 111.7 46.8 -59.0 -41.5 10.9 75.6 4.1 72 649 A R H X S+ 0 0 56 -4,-1.7 4,-3.2 -5,-0.2 5,-0.3 0.868 108.9 54.9 -69.3 -35.6 10.0 74.7 7.7 73 650 A V H X S+ 0 0 0 -4,-2.7 4,-3.3 2,-0.2 -2,-0.2 0.965 112.0 43.5 -60.3 -52.0 7.9 71.8 6.5 74 651 A L H X S+ 0 0 63 -4,-2.8 4,-3.4 2,-0.2 -2,-0.2 0.929 115.5 48.4 -59.8 -45.6 10.9 70.4 4.6 75 652 A A H X S+ 0 0 61 -4,-2.7 4,-3.0 -5,-0.2 -2,-0.2 0.934 115.5 43.7 -60.8 -46.9 13.3 71.1 7.5 76 653 A A H X S+ 0 0 6 -4,-3.2 4,-3.1 2,-0.2 5,-0.3 0.919 115.1 50.1 -63.6 -44.1 11.0 69.5 10.0 77 654 A H H X S+ 0 0 70 -4,-3.3 4,-2.2 -5,-0.3 -2,-0.2 0.925 112.8 46.6 -58.6 -46.5 10.3 66.6 7.6 78 655 A A H X S+ 0 0 57 -4,-3.4 4,-2.6 -5,-0.2 -2,-0.2 0.924 114.5 47.7 -63.2 -44.9 14.1 66.2 7.1 79 656 A Y H X S+ 0 0 113 -4,-3.0 4,-1.6 -5,-0.2 -2,-0.2 0.963 117.0 40.1 -62.0 -53.6 14.8 66.3 10.9 80 657 A W H < S+ 0 0 60 -4,-3.1 -1,-0.2 2,-0.2 -2,-0.2 0.797 114.9 53.5 -68.2 -27.4 12.1 63.9 11.9 81 658 A S H < S+ 0 0 69 -4,-2.2 -1,-0.2 -5,-0.3 -2,-0.2 0.924 111.3 45.6 -69.8 -43.6 12.8 61.7 8.9 82 659 A Q H < 0 0 130 -4,-2.6 -2,-0.2 -5,-0.2 -1,-0.2 0.767 360.0 360.0 -68.3 -25.5 16.4 61.6 10.0 83 660 A Q < 0 0 134 -4,-1.6 -2,-0.2 -5,-0.2 -1,-0.2 0.945 360.0 360.0 -76.4 360.0 15.2 61.0 13.5