==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 04-MAY-99 1CL3 . COMPND 2 MOLECULE: POLYOMAVIRUS ENHANCER BINDING PROTEIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.GOGER,V.GUPTA,W.Y.KIM,K.SHIGESADA,Y.ITO,M.H.WERNER . 138 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 10303.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 91 65.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 20.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 0.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 15 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 30 21.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 4 A V 0 0 130 0, 0.0 133,-0.1 0, 0.0 130,-0.0 0.000 360.0 360.0 360.0 164.3 -15.2 -24.7 2.4 2 5 A V > - 0 0 71 1,-0.2 3,-1.2 131,-0.1 4,-0.4 -0.445 360.0-136.0 -65.7 135.1 -13.6 -25.8 -0.9 3 6 A P T 3> S+ 0 0 94 0, 0.0 4,-1.2 0, 0.0 -1,-0.2 0.439 90.5 89.1 -73.5 4.2 -10.1 -27.3 -0.2 4 7 A D H 3> S+ 0 0 92 2,-0.2 4,-1.1 3,-0.1 5,-0.1 0.631 81.4 60.9 -77.9 -6.5 -8.7 -25.4 -3.2 5 8 A Q H <> S+ 0 0 24 -3,-1.2 4,-1.9 2,-0.2 3,-0.4 0.964 107.6 36.5 -80.0 -68.9 -8.0 -22.4 -0.8 6 9 A R H > S+ 0 0 181 -4,-0.4 4,-2.5 1,-0.2 5,-0.2 0.860 115.2 61.0 -50.6 -37.6 -5.6 -23.9 1.7 7 10 A S H X S+ 0 0 41 -4,-1.2 4,-1.8 2,-0.2 5,-0.3 0.945 104.8 43.4 -61.8 -49.2 -4.1 -25.9 -1.2 8 11 A K H X S+ 0 0 84 -4,-1.1 4,-2.7 -3,-0.4 -1,-0.2 0.949 115.8 50.0 -64.2 -43.4 -2.9 -22.9 -3.3 9 12 A F H < S+ 0 0 94 -4,-1.9 -2,-0.2 1,-0.2 -1,-0.2 0.915 113.3 44.3 -61.9 -43.6 -1.6 -21.1 -0.2 10 13 A E H < S+ 0 0 117 -4,-2.5 -1,-0.2 -5,-0.2 -2,-0.2 0.803 125.0 32.0 -74.6 -26.7 0.4 -24.1 1.1 11 14 A N H < S+ 0 0 89 -4,-1.8 2,-0.7 -5,-0.2 -2,-0.2 0.678 94.1 93.0-104.7 -19.9 1.9 -25.1 -2.4 12 15 A E >< - 0 0 99 -4,-2.7 3,-0.8 -5,-0.3 4,-0.3 -0.624 52.9-167.4 -78.5 117.0 2.3 -21.7 -4.2 13 16 A E T 3> + 0 0 131 -2,-0.7 4,-2.3 1,-0.2 5,-0.3 0.560 65.0 102.1 -77.4 -8.4 5.8 -20.3 -3.5 14 17 A F H 3>>S+ 0 0 83 1,-0.2 5,-0.9 2,-0.2 4,-0.9 0.710 74.6 61.8 -52.0 -16.1 4.7 -16.9 -4.9 15 18 A F H X>5S+ 0 0 14 -3,-0.8 4,-1.7 3,-0.2 3,-0.5 0.980 109.1 34.7 -77.3 -59.0 4.5 -15.7 -1.3 16 19 A R H 345S+ 0 0 162 -4,-0.3 -2,-0.2 1,-0.2 -1,-0.1 0.910 114.6 59.8 -61.5 -39.5 8.1 -16.2 -0.2 17 20 A K H 3<5S- 0 0 145 -4,-2.3 -1,-0.2 1,-0.1 -2,-0.2 0.855 136.8 -8.0 -60.1 -32.8 9.4 -15.2 -3.7 18 21 A L H <<5S+ 0 0 41 -4,-0.9 2,-2.8 -3,-0.5 104,-0.3 0.574 117.7 80.1-135.6 -31.9 7.7 -11.7 -3.5 19 22 A S S < + 0 0 131 -2,-0.3 3,-2.9 1,-0.2 7,-0.1 -0.598 40.9 178.9 -86.1 85.5 8.8 12.2 -11.0 30 33 A R T 3 S+ 0 0 209 -2,-1.5 -1,-0.2 1,-0.3 6,-0.1 0.811 81.8 65.8 -56.4 -24.9 12.2 11.6 -9.3 31 34 A D T 3 S+ 0 0 131 -3,-0.2 -1,-0.3 3,-0.0 -2,-0.1 0.598 82.7 94.1 -75.1 -3.2 13.6 13.9 -12.0 32 35 A R S < S- 0 0 141 -3,-2.9 4,-0.4 1,-0.1 -4,-0.0 -0.760 97.6 -96.1 -86.9 126.4 11.5 16.6 -10.3 33 36 A P > - 0 0 83 0, 0.0 3,-2.5 0, 0.0 4,-0.2 0.175 50.3 -83.2 -35.3 161.1 13.7 18.4 -7.8 34 37 A H T >> S+ 0 0 137 1,-0.3 3,-2.3 2,-0.2 4,-0.5 0.693 117.8 94.3 -46.7 -12.4 13.6 17.2 -4.2 35 38 A E H 3> + 0 0 48 1,-0.3 4,-1.7 2,-0.2 5,-0.4 0.710 68.7 70.7 -57.8 -15.7 10.5 19.5 -4.1 36 39 A E H <>>S+ 0 0 17 -3,-2.5 4,-1.9 -4,-0.4 5,-0.7 0.799 81.4 72.9 -72.4 -26.0 8.5 16.4 -4.9 37 40 A R H <>5S+ 0 0 69 -3,-2.3 4,-0.9 -4,-0.2 -1,-0.2 0.963 112.6 23.8 -56.3 -47.8 9.1 15.0 -1.4 38 41 A Q H X5S+ 0 0 85 -4,-0.5 4,-2.5 -3,-0.2 5,-0.3 0.961 129.2 42.9 -81.7 -55.2 6.7 17.5 0.1 39 42 A T H X5S+ 0 0 52 -4,-1.7 4,-2.3 1,-0.2 5,-0.4 0.909 116.3 48.7 -60.4 -40.2 4.4 18.4 -2.8 40 43 A R H X5S+ 0 0 65 -4,-1.9 4,-1.8 -5,-0.4 5,-0.3 0.923 111.5 51.0 -67.1 -39.5 4.1 14.8 -3.9 41 44 A F H X> - 0 0 3 -37,-0.2 3,-1.3 1,-0.2 4,-1.2 -0.749 33.2-154.2 -87.7 117.1 -6.0 13.3 4.3 80 83 A R H 3> S+ 0 0 189 -2,-0.7 4,-0.7 1,-0.3 3,-0.3 0.900 95.4 62.4 -57.8 -36.6 -5.8 14.1 8.0 81 84 A E H 34 S+ 0 0 98 1,-0.2 3,-0.3 2,-0.2 -1,-0.3 0.818 97.5 58.0 -59.4 -29.7 -4.9 10.4 8.6 82 85 A Y H X> S+ 0 0 23 -3,-1.3 3,-0.8 1,-0.2 4,-0.5 0.915 110.1 41.1 -70.7 -38.9 -1.8 10.9 6.5 83 86 A V H 3X S+ 0 0 21 -4,-1.2 4,-0.8 -3,-0.3 -1,-0.2 0.490 101.2 71.7 -88.2 2.8 -0.4 13.7 8.8 84 87 A D H 3< S+ 0 0 92 -4,-0.7 -1,-0.2 -3,-0.3 -2,-0.2 0.484 110.9 32.3 -92.0 -0.1 -1.6 11.9 12.0 85 88 A L H <4 S+ 0 0 28 -3,-0.8 6,-0.8 -4,-0.2 5,-0.4 0.389 108.4 67.7-128.5 -7.2 1.3 9.4 11.3 86 89 A E H < S+ 0 0 28 -4,-0.5 4,-0.2 1,-0.2 -3,-0.1 0.860 99.2 51.9 -81.4 -35.9 3.7 11.9 9.7 87 90 A R S < S+ 0 0 206 -4,-0.8 -1,-0.2 3,-0.1 -3,-0.1 0.743 108.6 58.3 -70.5 -23.0 4.1 13.7 13.0 88 91 A E S S+ 0 0 156 3,-0.2 -2,-0.1 1,-0.1 -3,-0.1 0.814 124.2 3.1 -76.0-106.2 4.9 10.4 14.7 89 92 A A S S- 0 0 73 -4,-0.3 -1,-0.1 2,-0.2 -3,-0.1 0.600 101.6-112.3 -58.5 -5.9 7.9 8.4 13.4 90 93 A G S S+ 0 0 29 -5,-0.4 23,-1.1 1,-0.3 2,-0.3 0.811 87.8 102.7 78.3 25.0 8.4 11.3 11.0 91 94 A K E -B 112 0A 70 -6,-0.8 2,-0.5 21,-0.2 -1,-0.3 -0.946 67.0-131.7-136.7 159.9 7.5 9.0 8.1 92 95 A V E +B 111 0A 12 19,-2.1 19,-1.2 -2,-0.3 2,-0.3 -0.948 35.0 160.0-115.7 127.6 4.3 8.5 6.0 93 96 A Y E -B 110 0A 107 -2,-0.5 2,-0.3 17,-0.2 17,-0.2 -0.960 23.8-150.1-144.3 162.5 3.0 5.0 5.5 94 97 A L - 0 0 29 15,-1.6 2,-0.4 -2,-0.3 15,-0.3 -0.980 4.9-168.0-133.7 147.7 -0.2 3.2 4.5 95 98 A K + 0 0 148 -2,-0.3 13,-0.2 13,-0.2 11,-0.0 -0.996 19.6 152.6-135.7 130.4 -1.7 -0.3 5.3 96 99 A A E -F 107 0C 24 11,-2.4 11,-1.9 -2,-0.4 2,-0.9 -0.990 43.7-118.0-156.3 149.2 -4.6 -2.0 3.5 97 100 A P E -F 106 0C 62 0, 0.0 2,-0.4 0, 0.0 9,-0.2 -0.752 37.4-177.7 -90.8 102.5 -6.0 -5.5 2.8 98 101 A M E -F 105 0C 64 7,-1.2 7,-1.7 -2,-0.9 2,-0.4 -0.838 17.1-140.2-104.1 137.6 -6.0 -6.0 -1.1 99 102 A I E -F 104 0C 103 -2,-0.4 5,-0.2 5,-0.2 2,-0.2 -0.777 15.6-170.3 -96.7 136.5 -7.4 -9.1 -2.8 100 103 A L - 0 0 69 3,-1.4 2,-4.2 -2,-0.4 0, 0.0 -0.513 59.3 -60.5-107.9 179.6 -5.6 -10.6 -5.9 101 104 A N S S+ 0 0 175 -2,-0.2 2,-0.1 1,-0.1 -1,-0.0 -0.243 134.2 33.1 -63.1 70.9 -7.1 -13.4 -8.0 102 105 A G S S- 0 0 33 -2,-4.2 2,-0.2 1,-0.0 -1,-0.1 -0.356 117.7 -39.8-178.2 -90.7 -7.1 -15.6 -5.0 103 106 A V S S- 0 0 13 -5,-0.1 -3,-1.4 -2,-0.1 2,-0.2 -0.875 71.7 -62.2-150.2 180.0 -7.6 -14.1 -1.5 104 107 A C E -F 99 0C 4 -2,-0.2 22,-0.5 -5,-0.2 2,-0.3 -0.467 44.0-175.0 -74.9 143.5 -6.7 -11.1 0.7 105 108 A V E -F 98 0C 5 -7,-1.7 -7,-1.2 -2,-0.2 2,-0.7 -0.938 29.4-113.2-131.2 150.5 -3.1 -10.4 1.5 106 109 A I E -FG 97 123C 45 17,-2.1 17,-1.1 -2,-0.3 2,-0.6 -0.776 30.7-173.6 -95.4 115.4 -1.9 -7.5 3.8 107 110 A W E +FG 96 122C 12 -11,-1.9 -11,-2.4 -2,-0.7 2,-0.2 -0.892 15.4 156.9-104.8 122.8 0.1 -4.8 2.0 108 111 A K + 0 0 78 13,-0.8 13,-0.5 -2,-0.6 -13,-0.2 -0.556 10.4 173.8-148.8 82.0 1.7 -2.1 4.2 109 112 A G - 0 0 2 -15,-0.3 -15,-1.6 11,-0.2 2,-0.3 -0.471 10.4-163.1 -82.5 158.6 4.7 -0.2 2.8 110 113 A W E +BC 93 119A 98 9,-1.6 9,-0.7 -17,-0.2 2,-0.3 -0.961 9.4 179.5-140.5 159.0 6.3 2.7 4.6 111 114 A I E -B 92 0A 13 -19,-1.2 -19,-2.1 -2,-0.3 5,-0.2 -0.992 30.5-107.7-155.6 150.5 8.7 5.6 3.5 112 115 A D E -B 91 0A 37 3,-0.9 -21,-0.2 -2,-0.3 6,-0.1 -0.278 37.8-106.6 -76.4 167.7 10.3 8.5 5.2 113 116 A L S S+ 0 0 55 -23,-1.1 -72,-0.1 1,-0.1 3,-0.1 0.818 115.5 30.1 -66.3 -29.1 9.1 12.1 4.5 114 117 A H S S+ 0 0 102 1,-0.2 2,-0.7 -76,-0.0 -1,-0.1 0.898 117.8 47.1 -98.7 -56.4 12.3 12.9 2.4 115 118 A R - 0 0 131 1,-0.1 2,-1.0 2,-0.0 -3,-0.9 -0.765 62.3-163.9 -92.1 115.7 13.5 9.6 0.7 116 119 A L + 0 0 36 -2,-0.7 -90,-0.8 1,-0.2 -1,-0.1 -0.283 66.0 96.0 -90.7 52.0 10.7 7.7 -0.9 117 120 A D + 0 0 76 -2,-1.0 -92,-0.2 -92,-0.2 -1,-0.2 -0.309 52.7 140.8-131.7 45.6 12.7 4.4 -1.1 118 121 A G - 0 0 4 -95,-0.1 -94,-2.6 -6,-0.1 2,-0.3 0.404 50.3-100.5 -68.4-148.8 11.5 2.7 2.1 119 122 A M E -AC 23 110A 49 -9,-0.7 -9,-1.6 -96,-0.3 2,-0.3 -0.958 26.5-166.1-138.4 154.1 10.7 -1.0 2.5 120 123 A G E -A 22 0A 1 -98,-2.7 -98,-0.8 -2,-0.3 2,-0.4 -0.856 9.6-150.7-151.4 113.6 7.4 -2.9 2.6 121 124 A C E -A 21 0A 48 -13,-0.5 -13,-0.8 -2,-0.3 2,-0.4 -0.666 14.6-166.7 -83.1 133.5 6.7 -6.5 3.8 122 125 A L E +G 107 0C 10 -102,-0.6 2,-0.3 -2,-0.4 -15,-0.2 -0.962 14.2 164.7-121.5 134.6 3.8 -8.2 2.0 123 126 A E E -G 106 0C 99 -17,-1.1 -17,-2.1 -2,-0.4 2,-1.3 -0.974 41.9-123.4-152.7 140.5 2.3 -11.5 3.3 124 127 A F + 0 0 34 -2,-0.3 -19,-0.2 -19,-0.2 -20,-0.0 -0.626 69.7 114.5 -79.7 96.0 -0.8 -13.7 2.9 125 128 A D + 0 0 131 -2,-1.3 2,-0.4 -21,-0.1 -1,-0.2 0.233 27.7 140.2-148.2 13.7 -2.0 -13.8 6.6 126 129 A E >> - 0 0 30 -22,-0.5 3,-2.1 -3,-0.2 4,-0.9 -0.460 43.4-151.8 -66.4 121.5 -5.4 -12.0 6.6 127 130 A E H 3> S+ 0 0 133 -2,-0.4 4,-1.4 1,-0.3 3,-0.3 0.880 101.4 62.2 -62.8 -29.5 -7.9 -13.8 8.8 128 131 A R H 3> S+ 0 0 119 1,-0.2 4,-2.5 2,-0.2 5,-0.4 0.721 91.8 71.1 -69.0 -11.0 -10.5 -12.3 6.5 129 132 A A H <> S+ 0 0 16 -3,-2.1 4,-1.9 3,-0.2 5,-0.2 0.967 97.5 44.3 -69.3 -50.3 -8.7 -14.5 3.9 130 133 A Q H X S+ 0 0 144 -4,-0.9 4,-1.2 -3,-0.3 -2,-0.2 0.959 125.0 33.4 -62.1 -47.5 -10.0 -17.8 5.3 131 134 A Q H X S+ 0 0 118 -4,-1.4 4,-2.5 2,-0.2 5,-0.2 0.920 117.8 52.3 -76.9 -40.8 -13.6 -16.6 5.8 132 135 A E H X S+ 0 0 44 -4,-2.5 4,-1.0 -5,-0.3 -3,-0.2 0.874 103.9 59.3 -64.6 -29.9 -13.7 -14.2 2.8 133 136 A D H >< S+ 0 0 25 -4,-1.9 3,-0.6 -5,-0.4 4,-0.5 0.965 108.3 44.7 -62.6 -44.3 -12.5 -17.0 0.5 134 137 A A H >< S+ 0 0 40 -4,-1.2 3,-0.8 1,-0.2 -2,-0.2 0.945 120.3 40.2 -62.4 -45.4 -15.6 -19.0 1.6 135 138 A L H 3< S+ 0 0 136 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.475 90.5 92.8 -82.2 -1.3 -17.8 -15.9 1.1 136 139 A A T << S+ 0 0 63 -4,-1.0 -1,-0.2 -3,-0.6 -2,-0.2 0.846 70.7 84.3 -61.5 -29.3 -15.9 -15.0 -2.1 137 140 A Q < 0 0 163 -3,-0.8 -3,-0.0 -4,-0.5 0, 0.0 -0.451 360.0 360.0 -74.4 146.4 -18.5 -16.9 -4.0 138 141 A Q 0 0 249 -2,-0.1 -1,-0.1 0, 0.0 -2,-0.0 0.555 360.0 360.0 -86.5 360.0 -21.8 -15.1 -4.9