==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 03-MAY-06 2CM0 . COMPND 2 MOLECULE: PEPTIDE N-GLYCANASE HOMOLOG; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.D.ALLEN,A.BUCHBERGER,M.BYCROFT . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5768.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 67 67.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 7.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 13.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 43 43.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 11 A G > 0 0 3 0, 0.0 3,-3.2 0, 0.0 7,-0.4 0.000 360.0 360.0 360.0-100.4 7.1 31.5 8.9 2 12 A S T 3 + 0 0 108 1,-0.3 6,-0.1 5,-0.2 92,-0.0 0.623 360.0 74.7 -50.8 -15.1 3.6 33.0 9.2 3 13 A A T 3 S+ 0 0 81 91,-0.1 -1,-0.3 1,-0.1 91,-0.0 0.757 94.4 59.5 -70.5 -22.6 4.5 35.5 6.5 4 14 A S S <> S- 0 0 4 -3,-3.2 4,-2.4 1,-0.1 5,-0.2 -0.915 77.2-145.8-109.4 129.7 4.2 32.6 4.0 5 15 A P H > S+ 0 0 95 0, 0.0 4,-1.7 0, 0.0 -1,-0.1 0.919 101.7 46.0 -57.9 -46.1 0.9 30.7 3.6 6 16 A A H > S+ 0 0 4 2,-0.2 4,-2.3 1,-0.2 58,-0.2 0.895 113.7 48.2 -65.8 -41.0 2.6 27.3 3.0 7 17 A V H > S+ 0 0 0 -6,-0.3 4,-2.2 1,-0.2 -1,-0.2 0.879 108.3 55.5 -66.9 -36.5 5.1 27.8 5.9 8 18 A A H < S+ 0 0 33 -4,-2.4 4,-0.3 -7,-0.4 -1,-0.2 0.884 109.2 47.1 -62.6 -38.1 2.2 28.7 8.1 9 19 A E H >< S+ 0 0 81 -4,-1.7 3,-1.8 1,-0.2 -2,-0.2 0.929 109.8 52.6 -68.1 -44.6 0.5 25.4 7.2 10 20 A L H >< S+ 0 0 0 -4,-2.3 3,-1.6 50,-0.3 -2,-0.2 0.863 100.8 63.0 -58.3 -36.6 3.7 23.5 7.8 11 21 A C T 3< S+ 0 0 44 -4,-2.2 -1,-0.3 1,-0.3 -2,-0.2 0.620 85.4 75.5 -65.2 -12.5 3.9 25.1 11.3 12 22 A Q T < S+ 0 0 126 -3,-1.8 -1,-0.3 -4,-0.3 -2,-0.2 0.530 79.6 95.3 -78.3 -3.9 0.6 23.4 12.2 13 23 A N S < S- 0 0 39 -3,-1.6 45,-0.0 46,-0.2 -3,-0.0 -0.329 87.8 -90.2 -82.6 165.5 2.4 20.1 12.7 14 24 A T > - 0 0 80 1,-0.1 4,-2.7 -2,-0.1 5,-0.2 -0.347 46.4-101.3 -70.2 159.0 3.8 18.6 15.9 15 25 A P H > S+ 0 0 93 0, 0.0 4,-2.7 0, 0.0 5,-0.2 0.880 118.0 46.3 -47.2 -54.7 7.5 19.5 16.7 16 26 A E H > S+ 0 0 137 1,-0.2 4,-2.0 2,-0.2 5,-0.2 0.881 115.5 46.1 -61.7 -41.1 9.2 16.2 15.6 17 27 A T H > S+ 0 0 49 2,-0.2 4,-2.4 1,-0.2 5,-0.2 0.899 113.0 50.1 -69.0 -41.2 7.3 16.1 12.3 18 28 A F H X S+ 0 0 13 -4,-2.7 4,-3.1 1,-0.2 5,-0.3 0.940 111.8 47.8 -62.1 -47.6 7.9 19.8 11.6 19 29 A L H X S+ 0 0 70 -4,-2.7 4,-2.0 -5,-0.2 -1,-0.2 0.893 113.1 47.9 -61.5 -40.4 11.7 19.4 12.3 20 30 A E H X S+ 0 0 97 -4,-2.0 4,-1.6 -5,-0.2 -1,-0.2 0.928 117.0 41.7 -66.9 -46.5 12.0 16.3 10.1 21 31 A A H X S+ 0 0 0 -4,-2.4 4,-2.5 2,-0.2 -2,-0.2 0.930 115.6 48.9 -67.2 -47.2 10.1 17.9 7.2 22 32 A S H X S+ 0 0 0 -4,-3.1 4,-2.7 -5,-0.2 5,-0.2 0.885 108.1 55.0 -62.4 -38.2 11.7 21.3 7.4 23 33 A K H X S+ 0 0 129 -4,-2.0 4,-1.7 -5,-0.3 -1,-0.2 0.921 111.1 44.5 -60.9 -43.9 15.2 19.7 7.6 24 34 A L H X S+ 0 0 14 -4,-1.6 4,-2.1 2,-0.2 -1,-0.2 0.902 112.0 53.2 -67.0 -40.8 14.6 17.9 4.4 25 35 A L H X S+ 0 0 0 -4,-2.5 4,-2.1 1,-0.2 -2,-0.2 0.910 109.8 47.4 -60.5 -43.4 13.1 21.0 2.8 26 36 A L H X S+ 0 0 15 -4,-2.7 4,-2.8 1,-0.2 -1,-0.2 0.851 108.0 57.5 -66.7 -33.1 16.2 23.0 3.6 27 37 A T H X S+ 0 0 74 -4,-1.7 4,-1.5 -5,-0.2 -2,-0.2 0.919 108.0 45.9 -63.1 -44.2 18.4 20.2 2.3 28 38 A Y H X S+ 0 0 37 -4,-2.1 4,-1.2 2,-0.2 -2,-0.2 0.929 114.9 46.9 -64.8 -45.5 16.7 20.4 -1.1 29 39 A A H X S+ 0 0 0 -4,-2.1 4,-2.3 1,-0.2 3,-0.3 0.926 111.2 51.1 -62.8 -45.8 16.9 24.3 -1.3 30 40 A D H X S+ 0 0 37 -4,-2.8 4,-1.8 1,-0.2 -1,-0.2 0.809 102.3 60.0 -64.0 -31.2 20.5 24.4 -0.2 31 41 A A H X S+ 0 0 32 -4,-1.5 4,-1.0 2,-0.2 -1,-0.2 0.912 111.3 41.0 -63.5 -40.8 21.6 21.9 -2.8 32 42 A I H < S+ 0 0 0 -4,-1.2 3,-0.4 -3,-0.3 -2,-0.2 0.915 114.6 50.3 -72.2 -45.0 20.4 24.2 -5.5 33 43 A L H < S+ 0 0 51 -4,-2.3 -2,-0.2 1,-0.2 -1,-0.2 0.773 110.1 52.3 -64.7 -26.4 21.7 27.4 -3.9 34 44 A R H < S+ 0 0 182 -4,-1.8 -1,-0.2 1,-0.3 -2,-0.2 0.772 132.9 9.1 -79.3 -29.4 25.1 25.7 -3.5 35 45 A N >< + 0 0 81 -4,-1.0 3,-1.8 -3,-0.4 -1,-0.3 -0.604 64.9 178.2-153.1 82.1 25.2 24.8 -7.2 36 46 A P T 3 S+ 0 0 52 0, 0.0 -3,-0.1 0, 0.0 -4,-0.1 0.552 81.4 61.7 -65.6 -5.7 22.5 26.4 -9.3 37 47 A N T 3 S+ 0 0 151 -5,-0.1 2,-0.7 4,-0.0 -5,-0.1 0.386 78.0 98.5-101.5 2.0 23.9 24.8 -12.4 38 48 A D < - 0 0 68 -3,-1.8 4,-0.5 -6,-0.2 3,-0.3 -0.820 54.7-164.1 -94.1 115.6 23.5 21.2 -11.3 39 49 A E S > S+ 0 0 160 -2,-0.7 3,-0.8 1,-0.2 40,-0.2 0.787 84.2 64.6 -70.3 -27.7 20.3 19.7 -12.8 40 50 A A G > S+ 0 0 66 1,-0.3 3,-1.5 2,-0.2 -1,-0.2 0.909 99.8 53.8 -61.4 -40.5 20.2 16.7 -10.5 41 51 A A G 3 S+ 0 0 21 -3,-0.3 -1,-0.3 1,-0.3 -9,-0.2 0.707 101.1 62.6 -65.8 -20.1 19.6 19.0 -7.6 42 52 A R G < S+ 0 0 29 -3,-0.8 37,-2.7 -4,-0.5 2,-0.4 0.352 97.0 65.5 -89.4 5.8 16.7 20.5 -9.5 43 53 A S E < -A 78 0A 48 -3,-1.5 2,-0.5 35,-0.2 35,-0.2 -0.993 56.3-169.7-133.2 137.0 14.6 17.3 -9.5 44 54 A I E -A 77 0A 7 33,-2.3 33,-2.2 -2,-0.4 2,-0.4 -0.980 23.1-134.2-124.6 117.1 13.0 15.3 -6.7 45 55 A R E > -A 76 0A 131 -2,-0.5 3,-1.8 31,-0.2 31,-0.3 -0.581 10.5-144.1 -73.2 123.9 11.6 11.9 -7.6 46 56 A I T 3 S+ 0 0 37 29,-2.7 -1,-0.2 -2,-0.4 6,-0.1 0.846 99.2 53.6 -56.9 -36.3 8.2 11.6 -6.0 47 57 A G T 3 S+ 0 0 46 28,-0.5 -1,-0.3 4,-0.1 29,-0.1 0.487 80.5 125.4 -78.8 -3.3 8.7 7.9 -5.2 48 58 A N S <> S- 0 0 50 -3,-1.8 4,-2.6 1,-0.1 5,-0.3 -0.223 70.2-122.1 -54.7 143.8 12.0 8.6 -3.4 49 59 A T H > S+ 0 0 108 1,-0.2 4,-1.7 2,-0.2 5,-0.3 0.925 108.8 46.4 -57.8 -47.7 12.0 7.2 0.2 50 60 A A H > S+ 0 0 13 2,-0.2 4,-2.3 1,-0.2 5,-0.4 0.935 116.6 43.6 -62.1 -48.5 12.6 10.6 1.9 51 61 A F H >>S+ 0 0 5 -6,-0.2 5,-2.5 1,-0.2 4,-2.0 0.960 115.2 46.8 -63.0 -52.7 10.0 12.5 -0.1 52 62 A S H <5S+ 0 0 40 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.783 123.7 33.2 -62.5 -28.7 7.3 9.8 0.1 53 63 A T H <5S+ 0 0 87 -4,-1.7 -1,-0.2 -5,-0.3 -2,-0.2 0.677 127.8 32.2-102.8 -20.1 7.7 9.3 3.9 54 64 A R H <5S+ 0 0 95 -4,-2.3 -3,-0.2 -5,-0.3 -2,-0.2 0.619 131.3 17.5-113.3 -15.4 8.7 12.7 5.2 55 65 A L T ><5S+ 0 0 0 -4,-2.0 3,-2.0 -5,-0.4 7,-0.5 0.711 110.8 64.0-121.3 -48.9 7.0 15.3 3.0 56 66 A L T 3 S- 0 0 19 -3,-2.0 3,-1.5 -41,-0.0 4,-0.6 -0.884 79.3-116.3-108.8 124.2 2.8 16.1 6.0 59 69 A R T 34 S+ 0 0 126 -2,-0.5 -46,-0.2 1,-0.2 -47,-0.1 -0.264 96.7 2.0 -53.5 127.1 0.5 19.1 5.9 60 70 A G T 3> S+ 0 0 0 1,-0.1 4,-1.3 -48,-0.1 -50,-0.3 0.163 100.8 106.5 81.4 -17.9 2.1 22.1 4.2 61 71 A A H X> S+ 0 0 0 -3,-1.5 4,-1.0 -6,-0.3 3,-0.5 0.945 84.1 37.6 -60.5 -55.5 5.4 20.3 3.3 62 72 A V H 3X S+ 0 0 17 -4,-0.6 4,-1.6 -7,-0.5 3,-0.3 0.849 111.3 62.3 -67.0 -32.0 4.8 19.9 -0.4 63 73 A E H 3> S+ 0 0 91 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.826 98.4 57.2 -61.4 -31.1 3.2 23.3 -0.5 64 74 A C H S+ 0 0 0 -4,-1.0 5,-2.4 -3,-0.3 4,-1.2 0.880 108.0 52.8 -64.9 -37.1 8.3 23.3 -2.4 66 76 A F H <5S+ 0 0 85 -4,-1.6 3,-0.4 1,-0.2 -2,-0.2 0.908 108.3 48.8 -65.7 -41.6 5.7 24.9 -4.6 67 77 A E H <5S+ 0 0 55 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.810 106.1 58.6 -68.2 -27.4 6.2 28.3 -3.1 68 78 A M H <5S- 0 0 1 -4,-1.6 -1,-0.2 -5,-0.1 -2,-0.2 0.823 130.1 -93.9 -68.5 -31.7 10.0 27.9 -3.5 69 79 A G T <5S+ 0 0 22 -4,-1.2 -3,-0.2 -3,-0.4 -2,-0.1 0.360 78.7 137.3 132.9 -2.4 9.4 27.5 -7.2 70 80 A F < - 0 0 4 -5,-2.4 2,-0.4 9,-0.2 -1,-0.3 -0.458 35.8-155.5 -73.8 148.2 9.1 23.7 -7.8 71 81 A E E -B 78 0A 116 7,-2.3 7,-2.9 -2,-0.1 2,-0.3 -0.976 16.2-119.2-125.9 139.3 6.4 22.3 -10.1 72 82 A E E +B 77 0A 124 -2,-0.4 5,-0.2 5,-0.2 2,-0.2 -0.611 32.1 173.1 -86.1 133.0 4.9 18.9 -10.0 73 83 A G - 0 0 29 3,-2.5 -27,-0.0 -2,-0.3 -1,-0.0 -0.503 51.3 -81.4-118.2-170.7 5.1 16.4 -12.8 74 84 A E S S+ 0 0 188 -2,-0.2 3,-0.1 1,-0.1 -2,-0.0 0.841 123.1 5.8 -65.1 -34.7 4.0 12.7 -13.2 75 85 A T S S+ 0 0 87 1,-0.2 -29,-2.7 -29,-0.1 -28,-0.5 0.611 128.1 33.3-123.4 -20.6 7.2 11.3 -11.5 76 86 A H E -A 45 0A 60 -31,-0.3 -3,-2.5 -30,-0.1 2,-0.5 -0.926 63.0-127.6-137.9 161.4 9.2 14.3 -10.2 77 87 A L E -AB 44 72A 0 -33,-2.2 -33,-2.3 -2,-0.3 2,-0.4 -0.932 38.9-159.0-103.2 130.2 8.9 17.8 -8.7 78 88 A I E -AB 43 71A 73 -7,-2.9 -7,-2.3 -2,-0.5 -35,-0.2 -0.943 21.4-149.4-122.5 138.2 11.1 20.1 -10.9 79 89 A F - 0 0 2 -37,-2.7 -9,-0.2 -2,-0.4 -2,-0.0 -0.886 34.0-133.8-102.0 102.8 12.7 23.5 -10.2 80 90 A P > - 0 0 26 0, 0.0 3,-1.0 0, 0.0 0, 0.0 -0.082 12.2-121.6 -54.9 152.4 12.9 25.2 -13.7 81 91 A K T 3 S+ 0 0 192 1,-0.2 -2,-0.0 -44,-0.0 -42,-0.0 0.795 115.8 56.3 -66.3 -26.2 16.0 26.9 -14.9 82 92 A K T 3 S+ 0 0 179 2,-0.1 -1,-0.2 0, 0.0 -3,-0.0 0.642 84.1 113.5 -79.3 -15.7 13.9 30.1 -15.2 83 93 A A S < S- 0 0 21 -3,-1.0 2,-0.5 1,-0.1 -14,-0.1 -0.192 75.9-105.7 -58.8 148.5 12.8 29.9 -11.5 84 94 A S > - 0 0 51 1,-0.2 4,-1.7 -16,-0.1 -1,-0.1 -0.647 19.3-162.8 -81.3 122.7 14.0 32.7 -9.2 85 95 A V H > S+ 0 0 55 -2,-0.5 4,-2.3 1,-0.2 -1,-0.2 0.740 94.1 61.1 -74.1 -21.2 16.8 31.7 -6.8 86 96 A E H > S+ 0 0 138 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.907 104.9 46.2 -69.2 -42.0 15.8 34.8 -4.8 87 97 A Q H > S+ 0 0 68 2,-0.2 4,-2.0 1,-0.2 5,-0.2 0.897 111.4 53.4 -65.5 -40.1 12.4 33.4 -4.2 88 98 A L H X S+ 0 0 0 -4,-1.7 4,-2.1 1,-0.2 -2,-0.2 0.925 110.3 46.0 -59.0 -47.8 14.0 30.0 -3.3 89 99 A Q H X S+ 0 0 76 -4,-2.3 4,-2.3 1,-0.2 -1,-0.2 0.848 108.8 57.8 -64.2 -36.4 16.2 31.7 -0.7 90 100 A K H X S+ 0 0 117 -4,-1.9 4,-1.8 2,-0.2 -2,-0.2 0.919 111.1 39.7 -61.2 -47.6 13.2 33.7 0.6 91 101 A I H X S+ 0 0 2 -4,-2.0 4,-1.6 2,-0.2 5,-0.2 0.878 111.4 59.5 -70.6 -36.8 11.2 30.6 1.4 92 102 A R H X S+ 0 0 55 -4,-2.1 4,-2.3 -5,-0.2 -2,-0.2 0.921 109.6 43.0 -56.2 -46.4 14.3 28.8 2.7 93 103 A D H X S+ 0 0 73 -4,-2.3 4,-2.1 1,-0.2 -1,-0.2 0.878 108.9 56.7 -69.8 -38.2 14.8 31.5 5.3 94 104 A L H < S+ 0 0 31 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.781 111.9 44.4 -64.3 -26.5 11.1 31.7 6.3 95 105 A I H >< S+ 0 0 0 -4,-1.6 3,-1.8 -3,-0.2 4,-0.3 0.913 110.3 53.9 -80.7 -48.7 11.2 28.0 7.1 96 106 A A H >< S+ 0 0 30 -4,-2.3 3,-1.4 1,-0.3 -2,-0.2 0.844 100.8 59.3 -55.2 -38.6 14.6 28.1 8.9 97 107 A I T 3< S+ 0 0 114 -4,-2.1 -1,-0.3 1,-0.2 -2,-0.1 0.578 100.8 57.9 -70.9 -6.4 13.4 30.9 11.4 98 108 A E T < 0 0 74 -3,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.432 360.0 360.0-101.1 -1.7 10.6 28.6 12.6 99 109 A R < 0 0 147 -3,-1.4 -1,-0.2 -4,-0.3 -2,-0.1 0.575 360.0 360.0 -84.5 360.0 12.8 25.7 13.7