==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOME 26-MAY-99 1CN7 . COMPND 2 MOLECULE: 60S RIBOSOMAL PROTEIN L30E; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR H.MAO,J.R.WILLAMSON . 104 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5752.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 77 74.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 3.8 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 9.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 9.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 17 16.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 30 28.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A A > 0 0 61 0, 0.0 3,-2.1 0, 0.0 6,-0.1 0.000 360.0 360.0 360.0 90.0 13.2 14.6 -18.8 2 3 A P T 3 + 0 0 88 0, 0.0 3,-0.2 0, 0.0 6,-0.2 0.330 360.0 91.9 -73.2 11.8 13.0 12.8 -22.2 3 4 A V T 3 S+ 0 0 144 1,-0.3 2,-1.8 2,-0.1 3,-0.1 0.901 85.3 58.7 -59.0 -41.5 16.9 12.5 -22.5 4 5 A K S X S- 0 0 63 -3,-2.1 3,-2.7 1,-0.2 -1,-0.3 -0.565 90.8-170.7 -78.0 71.8 15.9 9.2 -20.8 5 6 A S G > + 0 0 84 -2,-1.8 3,-1.7 1,-0.3 -1,-0.2 0.541 69.2 86.7 -62.4 -5.4 13.8 8.7 -24.0 6 7 A Q G > S+ 0 0 71 1,-0.2 3,-2.2 2,-0.1 -1,-0.3 0.803 73.4 82.3 -45.1 -32.3 12.1 5.6 -22.5 7 8 A E G X + 0 0 23 -3,-2.7 3,-2.4 1,-0.3 4,-0.5 0.739 65.1 80.4 -51.5 -31.4 9.9 8.4 -21.2 8 9 A S G <> S+ 0 0 56 -3,-1.7 4,-2.3 1,-0.3 -1,-0.3 0.546 70.2 82.9 -60.5 -5.3 8.0 8.5 -24.6 9 10 A I H <> S+ 0 0 15 -3,-2.2 4,-2.9 2,-0.2 -1,-0.3 0.931 89.1 54.7 -53.5 -42.6 6.1 5.5 -23.1 10 11 A N H <> S+ 0 0 21 -3,-2.4 4,-2.9 2,-0.2 5,-0.2 0.908 106.7 49.1 -54.5 -49.9 4.1 8.4 -21.4 11 12 A Q H > S+ 0 0 134 -4,-0.5 4,-2.5 2,-0.2 -2,-0.2 0.947 116.1 41.0 -57.8 -53.7 3.4 10.0 -24.8 12 13 A K H X S+ 0 0 61 -4,-2.3 4,-1.8 2,-0.2 -2,-0.2 0.865 116.3 51.1 -64.8 -36.7 2.2 6.7 -26.4 13 14 A L H X S+ 0 0 0 -4,-2.9 4,-3.2 2,-0.2 -2,-0.2 0.882 111.1 46.6 -71.1 -38.8 0.3 5.7 -23.2 14 15 A A H X S+ 0 0 35 -4,-2.9 4,-1.9 2,-0.2 -2,-0.2 0.926 109.0 55.4 -65.8 -43.3 -1.5 9.2 -23.1 15 16 A L H < S+ 0 0 84 -4,-2.5 -2,-0.2 -5,-0.2 -1,-0.2 0.886 114.6 41.6 -51.6 -42.3 -2.3 8.7 -26.8 16 17 A V H >X S+ 0 0 0 -4,-1.8 4,-3.3 1,-0.2 3,-2.7 0.966 108.0 57.3 -64.5 -59.0 -3.9 5.4 -25.7 17 18 A I H 3< S+ 0 0 25 -4,-3.2 -2,-0.2 1,-0.3 -3,-0.2 0.693 85.3 84.0 -54.5 -19.7 -5.6 6.8 -22.5 18 19 A K T 3< S- 0 0 139 -4,-1.9 -1,-0.3 -5,-0.1 -2,-0.2 0.786 128.1 -18.5 -47.1 -35.2 -7.4 9.3 -24.9 19 20 A S T <4 S+ 0 0 56 -3,-2.7 -2,-0.2 -4,-0.2 76,-0.2 0.442 116.2 96.9-150.4 -16.5 -9.9 6.4 -25.4 20 21 A G S < S- 0 0 1 -4,-3.3 74,-0.3 74,-0.2 2,-0.3 -0.454 79.0 -99.7 -79.4 152.2 -8.3 3.1 -24.3 21 22 A K + 0 0 111 72,-2.5 71,-2.9 -2,-0.1 2,-0.2 -0.559 48.1 158.9 -94.5 138.1 -9.1 1.8 -20.8 22 23 A Y E -A 91 0A 109 -2,-0.3 2,-0.3 69,-0.2 69,-0.2 -0.774 27.9-139.5-141.2 174.3 -6.9 2.1 -17.7 23 24 A T E -A 90 0A 10 67,-2.0 67,-2.0 -2,-0.2 2,-0.4 -0.976 17.8-148.7-146.6 150.8 -6.7 2.1 -13.9 24 25 A L E +A 89 0A 34 -2,-0.3 4,-0.3 65,-0.2 65,-0.2 -0.980 49.7 15.1-136.3 126.1 -4.6 4.4 -11.4 25 26 A G S >> S- 0 0 16 63,-2.8 4,-2.3 -2,-0.4 3,-0.9 0.255 89.1 -73.0 86.9 147.7 -3.0 4.0 -8.0 26 27 A Y H 3> S+ 0 0 74 1,-0.3 4,-2.8 2,-0.2 5,-0.2 0.795 129.1 41.7 -44.8 -59.2 -2.1 0.8 -6.0 27 28 A K H 3> S+ 0 0 180 1,-0.2 4,-2.7 2,-0.2 -1,-0.3 0.852 116.9 50.1 -56.5 -39.7 -5.7 -0.3 -4.8 28 29 A S H <> S+ 0 0 43 -3,-0.9 4,-2.0 -4,-0.3 -2,-0.2 0.883 115.5 40.9 -71.0 -46.0 -7.2 0.5 -8.3 29 30 A T H X S+ 0 0 0 -4,-2.3 4,-2.9 2,-0.2 5,-0.3 0.997 115.7 50.7 -60.2 -61.3 -4.5 -1.4 -10.2 30 31 A V H X S+ 0 0 16 -4,-2.8 4,-2.4 1,-0.2 -2,-0.2 0.826 110.4 52.5 -47.7 -45.7 -4.6 -4.3 -7.7 31 32 A K H X S+ 0 0 116 -4,-2.7 4,-1.5 -5,-0.2 -1,-0.2 0.968 116.4 35.9 -45.4 -69.6 -8.4 -4.4 -8.0 32 33 A S H <>S+ 0 0 8 -4,-2.0 5,-1.7 2,-0.2 6,-0.4 0.715 114.9 55.5 -77.0 -15.2 -8.5 -4.7 -11.8 33 34 A L H ><5S+ 0 0 1 -4,-2.9 3,-1.7 3,-0.2 -1,-0.2 0.901 109.0 48.6 -69.5 -42.8 -5.4 -6.9 -12.0 34 35 A R H 3<5S+ 0 0 170 -4,-2.4 -2,-0.2 -5,-0.3 -3,-0.2 0.750 103.9 59.9 -71.5 -20.1 -7.2 -9.3 -9.5 35 36 A Q T 3<5S- 0 0 113 -4,-1.5 -1,-0.3 -5,-0.2 -2,-0.2 0.468 112.0-130.8 -71.4 -6.9 -10.2 -8.9 -12.0 36 37 A G T < 5S+ 0 0 41 -3,-1.7 27,-0.5 -5,-0.2 -3,-0.2 0.487 71.3 123.8 76.9 3.9 -7.7 -10.4 -14.5 37 38 A K < + 0 0 97 -5,-1.7 -4,-0.2 25,-0.1 2,-0.1 0.422 40.7 90.7 -94.3 -4.4 -8.5 -7.7 -17.0 38 39 A S - 0 0 11 -6,-0.4 25,-0.7 -5,-0.1 54,-0.3 -0.471 41.6-174.1 -83.5 161.2 -5.2 -5.9 -17.8 39 40 A K S S+ 0 0 67 52,-2.9 26,-2.7 1,-0.3 2,-0.3 0.468 79.0 27.8-123.2 -16.1 -2.5 -6.6 -20.5 40 41 A L E -bC 65 91A 0 51,-1.8 51,-3.0 24,-0.3 2,-0.4 -0.988 59.5-163.8-144.8 136.9 0.1 -4.0 -19.2 41 42 A I E -bC 66 90A 0 24,-3.1 26,-2.4 -2,-0.3 2,-0.5 -0.970 8.3-156.4-111.3 135.7 1.1 -2.5 -15.8 42 43 A I E -bC 67 89A 0 47,-2.6 47,-2.3 -2,-0.4 2,-0.5 -0.939 6.7-172.7-102.1 132.2 3.3 0.6 -15.4 43 44 A I E - C 0 88A 4 24,-2.8 2,-1.2 -2,-0.5 26,-0.4 -0.862 2.3-177.7-124.2 91.6 5.1 1.0 -12.1 44 45 A A E + C 0 87A 0 43,-2.4 43,-2.2 -2,-0.5 2,-0.2 -0.600 53.6 81.2 -91.0 70.8 6.7 4.4 -12.1 45 46 A A S S- 0 0 25 -2,-1.2 2,-2.4 41,-0.2 25,-0.2 -0.881 91.0-107.1-160.6 148.5 8.5 4.2 -8.7 46 47 A N - 0 0 120 24,-0.3 -2,-0.1 -2,-0.2 25,-0.0 -0.473 60.9-158.7 -72.0 70.9 11.9 2.6 -7.5 47 48 A T - 0 0 28 -2,-2.4 -2,-0.0 -4,-0.2 23,-0.0 -0.348 12.1-113.5 -78.1 130.5 9.5 0.1 -5.9 48 49 A P >> - 0 0 92 0, 0.0 4,-2.8 0, 0.0 3,-1.6 -0.238 33.0-105.5 -67.6 152.9 10.6 -2.1 -3.0 49 50 A V H 3> S+ 0 0 106 1,-0.3 4,-2.5 2,-0.2 5,-0.1 0.777 116.6 46.0 -51.8 -46.6 10.9 -5.9 -3.5 50 51 A L H 3> S+ 0 0 143 2,-0.2 4,-1.2 3,-0.2 -1,-0.3 0.750 118.1 43.5 -69.0 -26.5 7.7 -7.1 -1.7 51 52 A R H <> S+ 0 0 92 -3,-1.6 4,-1.9 2,-0.2 -2,-0.2 0.898 115.8 45.6 -90.9 -40.7 5.6 -4.3 -3.3 52 53 A K H X S+ 0 0 54 -4,-2.8 4,-2.8 1,-0.2 5,-0.2 0.960 114.3 51.6 -58.6 -49.0 7.0 -4.8 -6.9 53 54 A S H X S+ 0 0 39 -4,-2.5 4,-2.5 -5,-0.3 -2,-0.2 0.837 107.0 51.2 -63.5 -37.0 6.7 -8.6 -6.4 54 55 A E H X S+ 0 0 54 -4,-1.2 4,-2.3 2,-0.2 -1,-0.2 0.943 113.8 44.8 -64.3 -43.3 3.0 -8.3 -5.3 55 56 A L H X S+ 0 0 3 -4,-1.9 4,-2.5 2,-0.2 -2,-0.2 0.920 114.4 49.6 -59.7 -43.9 2.2 -6.2 -8.5 56 57 A E H X S+ 0 0 67 -4,-2.8 4,-1.8 2,-0.2 -2,-0.2 0.867 108.0 54.1 -61.1 -40.4 4.3 -8.7 -10.5 57 58 A Y H X S+ 0 0 134 -4,-2.5 4,-2.1 2,-0.2 -2,-0.2 0.926 110.7 45.2 -61.4 -46.5 2.3 -11.5 -8.9 58 59 A Y H X S+ 0 0 13 -4,-2.3 4,-2.9 2,-0.2 -2,-0.2 0.890 110.1 54.5 -66.4 -36.7 -1.0 -9.9 -10.0 59 60 A A H <>S+ 0 0 4 -4,-2.5 5,-2.4 1,-0.2 -2,-0.2 0.846 112.8 44.4 -58.0 -35.7 0.5 -9.3 -13.5 60 61 A M H <5S+ 0 0 116 -4,-1.8 -2,-0.2 3,-0.2 -1,-0.2 0.771 112.6 49.6 -78.3 -34.8 1.2 -13.1 -13.5 61 62 A L H <5S+ 0 0 97 -4,-2.1 -2,-0.2 -5,-0.1 -3,-0.2 0.956 120.4 40.4 -68.9 -53.2 -2.3 -14.0 -12.2 62 63 A S T <5S- 0 0 3 -4,-2.9 2,-0.4 -5,-0.1 -25,-0.1 0.041 108.6-105.8 -62.3-174.1 -3.7 -11.8 -14.9 63 64 A K T 5 + 0 0 150 -25,-0.7 2,-0.4 -27,-0.5 -3,-0.2 -0.650 69.6 143.8-121.8 75.7 -1.9 -12.1 -18.3 64 65 A T < - 0 0 19 -5,-2.4 -24,-0.3 -2,-0.4 2,-0.2 -0.927 49.0-130.4-132.5 133.6 -0.1 -8.8 -18.1 65 66 A K E -b 40 0A 91 -26,-2.7 -24,-3.1 -2,-0.4 2,-0.4 -0.554 25.2-136.0 -79.7 149.9 3.3 -7.2 -19.0 66 67 A V E -b 41 0A 38 -26,-0.2 2,-0.5 -2,-0.2 -24,-0.2 -0.925 16.9-172.8-113.2 128.9 5.3 -5.2 -16.4 67 68 A Y E -b 42 0A 53 -26,-2.4 -24,-2.8 -2,-0.4 2,-1.4 -0.925 11.1-156.8-125.0 103.7 7.0 -1.9 -17.1 68 69 A Y + 0 0 69 -2,-0.5 2,-1.5 -26,-0.2 -24,-0.2 -0.630 15.8 174.8 -79.5 88.0 9.3 -0.4 -14.4 69 70 A F + 0 0 2 -2,-1.4 5,-0.3 -26,-0.4 7,-0.2 -0.291 23.4 159.3 -79.8 46.3 9.3 3.3 -15.2 70 71 A Q + 0 0 90 -2,-1.5 2,-0.5 -26,-0.2 -24,-0.3 0.447 18.5 123.0 -74.8 -2.5 11.2 3.5 -12.0 71 72 A G > - 0 0 29 -26,-0.2 3,-3.0 -3,-0.2 4,-0.2 -0.480 69.1-129.5 -56.4 109.2 13.0 6.9 -12.4 72 73 A G T 3 S+ 0 0 57 -2,-0.5 -1,-0.1 1,-0.3 -2,-0.0 0.661 102.3 73.1 -43.7 -32.6 11.8 8.7 -9.3 73 74 A N T 3 S- 0 0 95 1,-0.1 -1,-0.3 13,-0.1 -3,-0.1 0.776 81.2-163.4 -38.9 -43.1 10.7 11.7 -11.4 74 75 A N X - 0 0 7 -3,-3.0 3,-1.8 -5,-0.3 -2,-0.1 0.906 12.9-178.1 36.9 66.4 7.7 9.6 -12.7 75 76 A E T > + 0 0 25 1,-0.3 3,-2.5 -4,-0.2 4,-0.2 0.690 65.4 91.3 -61.0 -15.2 6.9 11.8 -15.8 76 77 A L T >> + 0 0 0 1,-0.3 3,-1.8 2,-0.2 4,-0.9 0.724 64.0 80.6 -48.4 -29.5 4.0 9.4 -16.4 77 78 A G H <>>S+ 0 0 4 -3,-1.8 4,-2.1 1,-0.3 5,-0.9 0.702 80.0 68.7 -56.5 -17.3 1.9 11.7 -14.3 78 79 A T H <45S+ 0 0 113 -3,-2.5 -1,-0.3 3,-0.2 -2,-0.2 0.860 102.3 43.9 -64.0 -38.6 1.7 13.8 -17.5 79 80 A A H <45S+ 0 0 15 -3,-1.8 -2,-0.2 -4,-0.2 -1,-0.2 0.707 130.3 22.1 -75.1 -26.1 -0.5 10.9 -19.0 80 81 A V H <5S- 0 0 22 -4,-0.9 -2,-0.2 9,-0.0 -3,-0.2 0.423 121.0 -76.1-131.8 -3.8 -2.7 10.4 -15.9 81 82 A G T ><5 - 0 0 37 -4,-2.1 3,-1.0 -5,-0.2 -3,-0.2 0.799 38.5-126.7 95.7 91.6 -2.8 13.5 -13.7 82 83 A K G > > + 0 0 68 -2,-0.3 3,-2.8 1,-0.2 4,-0.9 0.203 66.9 133.3 -52.4 -1.1 -1.4 -1.0 -30.0 99 100 A I H >> + 0 0 2 1,-0.3 4,-3.0 2,-0.2 3,-1.0 0.731 69.9 43.6 -45.3 -49.2 0.8 -0.1 -27.0 100 101 A L H 34 S+ 0 0 15 -3,-0.4 -1,-0.3 1,-0.3 -35,-0.1 0.459 117.6 45.6 -85.6 -0.8 0.4 -3.3 -24.9 101 102 A T H <4 S+ 0 0 103 -3,-2.8 -1,-0.3 3,-0.2 -2,-0.2 0.303 114.5 50.3-106.8 0.4 0.8 -5.6 -27.9 102 103 A T H << S+ 0 0 91 -3,-1.0 -2,-0.2 -4,-0.9 -3,-0.2 0.786 118.8 35.6 -96.2 -41.6 3.9 -3.5 -29.0 103 104 A L < 0 0 50 -4,-3.0 -3,-0.1 -5,-0.2 -1,-0.1 0.271 360.0 360.0 -69.7 4.3 5.5 -3.7 -25.5 104 105 A A 0 0 68 -5,-0.2 -3,-0.2 -39,-0.1 -4,-0.1 0.533 360.0 360.0 -45.8 360.0 4.0 -7.1 -25.6