==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 17-MAY-05 2CO8 . COMPND 2 MOLECULE: NEDD9 INTERACTING PROTEIN WITH CALPONIN HOMOLOGY . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.SATO,T.TOMIZAWA,K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA, . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6844.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 28 34.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 13.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 12.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 132 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 171.5 -18.1 11.7 -27.3 2 2 A S + 0 0 133 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.955 360.0 125.9-131.7 114.4 -16.4 13.7 -29.9 3 3 A S - 0 0 119 -2,-0.4 2,-0.9 2,-0.1 0, 0.0 -0.986 56.6-113.3-160.2 160.2 -14.8 17.1 -29.1 4 4 A G + 0 0 82 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.718 58.2 133.5-103.8 84.2 -11.6 19.1 -29.3 5 5 A S + 0 0 106 -2,-0.9 2,-0.3 0, 0.0 -2,-0.1 -0.903 13.0 137.2-136.5 106.5 -10.4 19.6 -25.8 6 6 A S + 0 0 127 -2,-0.4 -2,-0.0 1,-0.1 0, 0.0 -0.833 28.7 94.0-153.2 109.1 -6.8 19.0 -24.7 7 7 A G + 0 0 70 -2,-0.3 2,-0.3 0, 0.0 -1,-0.1 0.061 36.9 157.8 166.6 69.9 -4.7 21.2 -22.5 8 8 A Q - 0 0 156 2,-0.0 2,-0.5 0, 0.0 -2,-0.0 -0.761 28.9-144.9-107.6 154.1 -4.5 20.5 -18.8 9 9 A H + 0 0 177 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.909 42.3 126.7-122.6 104.2 -1.8 21.5 -16.3 10 10 A Q - 0 0 136 -2,-0.5 2,-0.3 0, 0.0 -2,-0.0 -0.924 29.0-167.1-147.6 170.6 -1.1 19.1 -13.5 11 11 A E - 0 0 177 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.955 16.3-164.9-154.7 170.0 1.8 17.2 -11.8 12 12 A A - 0 0 90 -2,-0.3 2,-0.2 1,-0.0 -1,-0.1 0.632 33.6-146.8-125.9 -54.1 2.6 14.3 -9.4 13 13 A G - 0 0 66 2,-0.1 4,-0.1 4,-0.0 -1,-0.0 -0.522 43.0 -17.6 108.8-178.1 6.2 14.5 -8.3 14 14 A A S S- 0 0 68 -2,-0.2 2,-1.5 1,-0.1 3,-0.0 -0.108 70.0-104.3 -58.0 159.4 8.9 12.1 -7.4 15 15 A G S S+ 0 0 73 1,-0.2 -1,-0.1 21,-0.0 22,-0.1 -0.276 92.1 104.1 -83.7 52.0 7.9 8.5 -6.5 16 16 A D + 0 0 80 -2,-1.5 9,-1.4 6,-0.1 2,-0.4 -0.334 50.0 106.9-127.2 50.4 8.4 9.1 -2.8 17 17 A L B S-A 24 0A 68 7,-0.2 20,-0.3 -4,-0.1 7,-0.2 -0.995 74.0 -98.3-133.3 135.6 4.9 9.4 -1.5 18 18 A C - 0 0 6 5,-1.5 20,-0.2 -2,-0.4 -1,-0.1 0.124 23.2-141.9 -41.0 162.6 2.8 6.9 0.5 19 19 A A S S+ 0 0 62 18,-0.6 19,-0.1 3,-0.1 -1,-0.1 0.770 92.2 59.8-100.9 -36.7 0.3 4.7 -1.4 20 20 A L S S- 0 0 98 1,-0.1 18,-0.1 3,-0.0 -2,-0.0 0.972 134.1 -2.1 -56.2 -59.9 -2.6 4.7 1.1 21 21 A C S S- 0 0 67 2,-0.1 -1,-0.1 0, 0.0 -2,-0.1 0.855 93.3-123.7 -99.0 -52.8 -3.1 8.5 1.1 22 22 A G + 0 0 40 1,-0.1 2,-0.2 2,-0.1 -3,-0.1 0.746 57.0 138.6 109.3 37.1 -0.4 9.8 -1.2 23 23 A E - 0 0 130 1,-0.2 -5,-1.5 0, 0.0 -1,-0.1 -0.467 60.3 -66.5-104.1 177.8 1.5 12.3 0.9 24 24 A H B -A 17 0A 153 -7,-0.2 2,-0.4 -2,-0.2 -7,-0.2 -0.311 49.5-143.9 -64.5 146.2 5.2 13.0 1.4 25 25 A L - 0 0 13 -9,-1.4 2,-0.2 -3,-0.1 -1,-0.1 -0.887 5.6-141.8-116.1 146.4 7.3 10.3 3.0 26 26 A Y > - 0 0 145 -2,-0.4 4,-1.6 1,-0.1 3,-0.4 -0.474 25.5-113.7 -99.0 172.2 10.2 10.7 5.4 27 27 A V T 4 S+ 0 0 92 1,-0.2 -1,-0.1 2,-0.2 -2,-0.0 0.704 121.0 33.0 -77.3 -20.5 13.5 8.8 5.6 28 28 A L T 4 S+ 0 0 124 3,-0.0 -1,-0.2 1,-0.0 3,-0.0 0.182 122.9 47.2-118.5 13.2 12.4 7.4 9.0 29 29 A E T 4 S+ 0 0 93 -3,-0.4 11,-0.8 10,-0.0 -2,-0.2 0.543 87.4 95.7-124.7 -23.0 8.7 7.2 8.3 30 30 A R B < -B 39 0B 102 -4,-1.6 2,-0.6 9,-0.1 9,-0.2 -0.464 62.4-146.4 -74.5 144.0 8.6 5.6 4.9 31 31 A L - 0 0 18 7,-0.9 2,-1.2 -2,-0.1 7,-0.4 -0.906 6.8-144.4-117.2 104.8 8.1 1.8 4.7 32 32 A C + 0 0 99 -2,-0.6 2,-0.5 5,-0.2 5,-0.2 -0.517 33.8 163.0 -69.2 96.8 10.0 0.0 1.9 33 33 A V B > S-C 36 0C 6 3,-3.4 3,-1.5 -2,-1.2 -2,-0.1 -0.889 73.5 -31.4-123.4 101.0 7.4 -2.7 1.0 34 34 A N T 3 S- 0 0 113 -2,-0.5 3,-0.1 1,-0.3 -1,-0.1 0.814 122.3 -53.3 62.6 30.5 8.0 -4.4 -2.4 35 35 A G T 3 S+ 0 0 63 1,-0.3 -1,-0.3 0, 0.0 2,-0.2 -0.025 120.5 106.5 95.5 -31.2 9.4 -1.1 -3.7 36 36 A H B < -C 33 0C 123 -3,-1.5 -3,-3.4 -4,-0.1 2,-0.3 -0.554 62.9-137.3 -83.6 147.4 6.3 0.9 -2.6 37 37 A F - 0 0 41 -20,-0.3 -18,-0.6 -5,-0.2 2,-0.3 -0.823 21.0-177.6-107.1 144.7 6.5 3.2 0.4 38 38 A F - 0 0 22 -7,-0.4 -7,-0.9 -2,-0.3 2,-0.2 -0.970 30.8-101.2-139.6 154.1 3.9 3.6 3.2 39 39 A H B > -B 30 0B 26 -2,-0.3 4,-2.6 -9,-0.2 -9,-0.1 -0.507 29.8-122.2 -75.8 140.7 3.3 5.7 6.3 40 40 A R T 4 S+ 0 0 128 -11,-0.8 -1,-0.1 1,-0.2 12,-0.1 0.789 116.5 41.4 -50.7 -28.7 4.1 4.1 9.6 41 41 A S T 4 S+ 0 0 74 -12,-0.1 -1,-0.2 10,-0.1 11,-0.1 0.926 113.2 49.4 -84.9 -53.0 0.5 4.9 10.5 42 42 A C T 4 S+ 0 0 33 9,-0.1 2,-0.4 1,-0.0 -2,-0.2 0.948 89.1 88.8 -50.9 -56.8 -1.3 4.0 7.2 43 43 A F < + 0 0 8 -4,-2.6 9,-1.1 8,-0.1 2,-0.3 -0.243 65.1 131.0 -49.0 101.7 0.5 0.6 7.0 44 44 A R B -D 51 0D 103 -2,-0.4 7,-0.2 7,-0.3 22,-0.2 -0.917 59.3 -70.6-149.0 173.2 -2.1 -1.5 8.9 45 45 A C - 0 0 10 5,-0.8 22,-0.2 -2,-0.3 -1,-0.1 -0.095 31.0-135.0 -63.1 166.8 -4.0 -4.7 8.8 46 46 A H S S+ 0 0 118 20,-0.2 -1,-0.1 2,-0.1 21,-0.1 0.481 104.1 31.2-101.9 -7.1 -7.0 -5.2 6.4 47 47 A T S S+ 0 0 88 3,-0.1 20,-0.1 0, 0.0 -1,-0.0 0.629 139.7 17.6-119.0 -30.6 -9.2 -6.8 9.0 48 48 A C S S- 0 0 47 2,-0.1 3,-0.1 0, 0.0 -2,-0.1 0.337 87.3-138.1-123.2 0.2 -8.1 -5.1 12.2 49 49 A E + 0 0 142 1,-0.2 2,-0.5 -5,-0.1 -3,-0.1 0.858 44.3 165.8 40.3 45.0 -6.2 -2.1 10.7 50 50 A A - 0 0 46 1,-0.1 -5,-0.8 3,-0.0 -1,-0.2 -0.785 51.8 -92.1 -95.3 130.9 -3.6 -2.7 13.3 51 51 A T B -D 44 0D 44 -2,-0.5 2,-1.3 -7,-0.2 -7,-0.3 -0.124 41.9-141.4 -41.2 103.1 -0.2 -1.0 12.9 52 52 A L - 0 0 6 -9,-1.1 -1,-0.1 -11,-0.1 5,-0.1 -0.595 19.3-152.7 -76.4 95.1 1.7 -3.7 11.0 53 53 A W > - 0 0 175 -2,-1.3 2,-2.1 3,-0.2 3,-2.0 -0.266 30.9 -92.5 -67.0 154.2 5.2 -3.5 12.6 54 54 A P T 3 S+ 0 0 102 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.444 119.3 23.9 -69.8 79.6 8.2 -4.6 10.5 55 55 A G T 3 S+ 0 0 73 -2,-2.1 -2,-0.1 2,-0.0 -3,-0.0 0.274 108.7 71.5 146.5 -7.4 8.3 -8.2 11.7 56 56 A G S < S+ 0 0 31 -3,-2.0 13,-0.7 2,-0.0 2,-0.3 -0.203 88.0 62.5-127.7 43.3 4.8 -9.0 12.8 57 57 A Y E -E 68 0E 55 11,-0.2 2,-0.3 -5,-0.1 11,-0.2 -0.973 55.2-154.4-157.6 166.6 2.9 -9.2 9.5 58 58 A E E -E 67 0E 117 9,-2.3 9,-2.6 -2,-0.3 2,-0.9 -0.997 18.7-130.1-149.9 148.1 2.6 -11.1 6.2 59 59 A Q - 0 0 71 -2,-0.3 7,-0.2 7,-0.2 9,-0.0 -0.819 30.8-133.4-103.6 96.7 1.4 -10.4 2.7 60 60 A H > - 0 0 11 -2,-0.9 4,-0.5 5,-0.3 5,-0.3 -0.147 7.3-145.9 -48.1 133.9 -0.9 -13.2 1.6 61 61 A P T 4 S+ 0 0 91 0, 0.0 -1,-0.1 0, 0.0 13,-0.0 0.943 86.4 65.1 -69.8 -50.3 -0.1 -14.4 -1.9 62 62 A G T 4 S+ 0 0 51 1,-0.1 -2,-0.0 2,-0.1 12,-0.0 0.883 121.8 11.0 -36.2 -90.0 -3.6 -15.2 -3.1 63 63 A D T 4 S- 0 0 87 1,-0.1 -1,-0.1 2,-0.0 -4,-0.0 0.979 100.5-124.8 -58.0 -61.1 -5.2 -11.8 -3.1 64 64 A G < + 0 0 32 -4,-0.5 2,-0.2 1,-0.2 -2,-0.1 0.669 63.3 119.1 117.6 32.1 -2.0 -9.8 -2.7 65 65 A H - 0 0 102 -5,-0.3 2,-0.5 -7,-0.0 -5,-0.3 -0.485 63.6 -99.9-114.2-174.3 -2.7 -7.6 0.4 66 66 A F + 0 0 37 -7,-0.2 2,-0.3 -22,-0.2 -7,-0.2 -0.950 42.2 167.1-116.3 122.0 -1.1 -7.2 3.8 67 67 A Y E -E 58 0E 19 -9,-2.6 -9,-2.3 -2,-0.5 -22,-0.1 -0.912 35.2-100.7-131.2 158.1 -2.6 -8.8 6.9 68 68 A C E >> -E 57 0E 16 -2,-0.3 4,-2.4 -11,-0.2 3,-0.8 -0.132 39.9-102.5 -69.5 170.7 -1.6 -9.5 10.5 69 69 A L T 34 S+ 0 0 110 -13,-0.7 -1,-0.1 1,-0.2 -12,-0.1 0.269 123.1 50.7 -78.9 13.4 -0.3 -12.9 11.7 70 70 A Q T 34 S+ 0 0 166 0, 0.0 -1,-0.2 0, 0.0 -13,-0.0 0.481 120.9 28.0-123.6 -14.4 -3.8 -13.4 13.3 71 71 A H T <4 S+ 0 0 67 -3,-0.8 -2,-0.2 2,-0.1 0, 0.0 0.516 83.5 124.8-121.8 -17.5 -6.0 -12.6 10.3 72 72 A L < - 0 0 39 -4,-2.4 -13,-0.1 1,-0.1 -6,-0.0 -0.252 53.6-143.7 -51.2 117.1 -3.6 -13.6 7.4 73 73 A P - 0 0 51 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.144 6.9-137.4 -69.7-168.5 -5.6 -16.1 5.3 74 74 A Q - 0 0 127 -14,-0.1 -14,-0.0 -13,-0.0 -2,-0.0 -0.911 29.9 -87.0-161.0 129.5 -4.2 -19.1 3.5 75 75 A T - 0 0 86 -2,-0.3 2,-0.5 1,-0.1 -15,-0.0 0.063 46.8-124.8 -34.0 138.1 -4.8 -20.7 0.1 76 76 A D + 0 0 150 -3,-0.0 2,-0.3 3,-0.0 -1,-0.1 -0.815 43.0 151.4 -97.5 128.9 -7.7 -23.1 0.1 77 77 A S - 0 0 95 -2,-0.5 0, 0.0 0, 0.0 0, 0.0 -0.992 55.7 -59.6-153.5 154.1 -7.2 -26.7 -1.0 78 78 A G - 0 0 69 -2,-0.3 0, 0.0 1,-0.2 0, 0.0 -0.025 42.1-156.0 -37.0 119.5 -8.5 -30.1 -0.5 79 79 A P + 0 0 107 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.877 16.2 177.8 -69.8 -39.5 -8.0 -30.9 3.3 80 80 A S + 0 0 125 1,-0.2 2,-0.3 0, 0.0 -2,-0.1 0.815 26.7 158.4 35.1 40.9 -8.0 -34.7 2.8 81 81 A S 0 0 107 1,-0.0 -1,-0.2 0, 0.0 -3,-0.0 -0.710 360.0 360.0 -95.5 144.6 -7.4 -34.8 6.5 82 82 A G 0 0 132 -2,-0.3 -1,-0.0 -3,-0.1 0, 0.0 -0.667 360.0 360.0-104.5 360.0 -8.1 -37.8 8.7