==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOME 18-MAY-05 2CON . COMPND 2 MOLECULE: NIN ONE BINDING PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR Y.DOI-KATAYAMA,H.HIROTA,T.TOMIZAWA,S.KOSHIBA,T.KIGAWA, . 79 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8051.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 22 27.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 12.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 13.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 124 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 103.1 -10.6 -32.2 -21.9 2 2 A S - 0 0 131 1,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.180 360.0-172.6 -58.5 152.0 -11.0 -34.4 -18.9 3 3 A S - 0 0 116 2,-0.0 2,-0.0 0, 0.0 -1,-0.0 -0.918 4.8-165.9-154.2 122.9 -8.6 -33.8 -16.0 4 4 A G - 0 0 79 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.057 8.2-144.8 -92.6-163.0 -8.0 -35.7 -12.8 5 5 A S - 0 0 128 -2,-0.0 2,-0.3 3,-0.0 3,-0.0 -0.902 12.7-177.9-168.9 137.4 -6.2 -35.0 -9.6 6 6 A S - 0 0 113 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.909 52.8 -47.3-136.6 163.6 -4.1 -36.8 -7.0 7 7 A G - 0 0 55 -2,-0.3 2,-0.6 1,-0.1 -1,-0.1 0.042 59.3-152.4 -31.7 118.2 -2.3 -36.1 -3.7 8 8 A V - 0 0 128 -3,-0.0 -1,-0.1 3,-0.0 3,-0.1 -0.901 4.5-147.8-106.9 121.8 -0.3 -32.9 -4.3 9 9 A R - 0 0 201 -2,-0.6 2,-0.4 1,-0.1 -1,-0.0 -0.148 39.1 -71.7 -76.5 176.2 2.8 -32.3 -2.3 10 10 A E - 0 0 160 2,-0.0 2,-0.4 1,-0.0 -1,-0.1 -0.566 52.0-167.0 -74.5 126.6 4.2 -28.9 -1.3 11 11 A A - 0 0 79 -2,-0.4 2,-0.5 -3,-0.1 -3,-0.0 -0.949 13.6-164.0-119.5 136.1 5.6 -26.9 -4.2 12 12 A R - 0 0 167 -2,-0.4 2,-0.7 35,-0.0 35,-0.1 -0.784 10.4-158.2-120.4 87.1 7.8 -23.8 -4.0 13 13 A S + 0 0 57 -2,-0.5 33,-1.4 33,-0.2 2,-0.2 -0.513 28.7 161.4 -67.9 108.5 7.9 -22.0 -7.3 14 14 A Y E -A 45 0A 79 -2,-0.7 2,-0.3 31,-0.2 31,-0.2 -0.713 19.8-164.5-123.2 174.6 11.0 -19.9 -7.2 15 15 A I E -A 44 0A 24 29,-2.4 29,-2.5 -2,-0.2 2,-0.6 -0.983 25.0-109.6-156.2 162.0 13.3 -18.2 -9.7 16 16 A L E -AB 43 25A 14 9,-1.0 9,-1.6 -2,-0.3 2,-0.7 -0.876 27.2-164.3-102.8 116.9 16.7 -16.5 -10.1 17 17 A R E -AB 42 24A 56 25,-2.2 25,-1.0 -2,-0.6 7,-0.2 -0.882 12.8-143.9-104.3 113.7 16.7 -12.8 -10.5 18 18 A C - 0 0 3 5,-3.1 23,-0.1 -2,-0.7 -1,-0.0 0.015 4.4-153.3 -63.4 176.8 20.0 -11.3 -11.7 19 19 A H S S+ 0 0 128 21,-0.3 -1,-0.1 3,-0.1 22,-0.1 0.681 84.1 52.6-117.4 -71.4 21.4 -8.0 -10.5 20 20 A G S S+ 0 0 64 1,-0.2 -2,-0.0 2,-0.1 0, 0.0 0.796 138.0 13.1 -38.9 -35.5 23.6 -6.2 -13.1 21 21 A C S S- 0 0 32 2,-0.1 -1,-0.2 0, 0.0 -2,-0.1 0.673 94.9-136.4-113.1 -32.4 20.7 -6.7 -15.5 22 22 A F + 0 0 128 1,-0.2 2,-0.4 -5,-0.0 -3,-0.1 0.868 49.6 150.6 74.9 38.1 17.9 -7.7 -13.2 23 23 A K - 0 0 107 2,-0.0 -5,-3.1 0, 0.0 2,-0.4 -0.822 38.8-139.1-105.7 143.4 16.7 -10.5 -15.4 24 24 A T E -B 17 0A 56 -2,-0.4 2,-0.4 -7,-0.2 -7,-0.2 -0.852 15.5-167.8-104.2 134.2 14.9 -13.6 -14.3 25 25 A T E -B 16 0A 38 -9,-1.6 2,-1.6 -2,-0.4 -9,-1.0 -0.978 31.6-114.1-124.7 130.2 15.7 -17.0 -15.8 26 26 A S S S+ 0 0 114 -2,-0.4 2,-0.2 -11,-0.1 -11,-0.1 -0.396 79.7 100.0 -61.9 89.1 13.7 -20.2 -15.3 27 27 A D - 0 0 57 -2,-1.6 -11,-0.2 -13,-0.1 -2,-0.2 -0.753 46.0-172.4-176.4 125.6 16.3 -22.2 -13.4 28 28 A M S S+ 0 0 90 -2,-0.2 -13,-0.1 -13,-0.1 -2,-0.1 0.108 93.6 42.0-108.4 19.2 16.9 -23.0 -9.8 29 29 A N S S+ 0 0 140 -13,-0.0 -1,-0.1 0, 0.0 -2,-0.0 0.561 83.0 107.3-131.0 -35.2 20.3 -24.6 -10.4 30 30 A R - 0 0 96 1,-0.1 11,-0.1 -5,-0.1 -3,-0.1 -0.057 44.0-168.7 -48.4 150.7 22.1 -22.4 -13.0 31 31 A V + 0 0 85 9,-0.1 2,-0.2 2,-0.0 -1,-0.1 0.542 65.0 60.3-118.3 -18.4 24.9 -20.3 -11.6 32 32 A F S S- 0 0 106 7,-0.1 2,-0.3 8,-0.1 7,-0.2 -0.635 74.0-127.8-108.9 168.2 25.5 -17.9 -14.6 33 33 A C - 0 0 17 5,-1.6 -9,-0.0 -2,-0.2 -2,-0.0 -0.788 8.0-161.7-115.2 159.0 23.3 -15.4 -16.3 34 34 A G S S+ 0 0 55 -2,-0.3 -1,-0.1 3,-0.1 -9,-0.0 0.817 83.3 62.5-104.4 -46.7 22.3 -15.0 -20.0 35 35 A H S S- 0 0 118 1,-0.1 -11,-0.0 2,-0.0 -2,-0.0 0.932 136.9 -9.1 -44.1 -60.9 21.0 -11.4 -20.2 36 36 A C S S- 0 0 67 -13,-0.1 -1,-0.1 2,-0.0 -2,-0.1 0.783 96.4-111.8-107.3 -47.5 24.3 -9.9 -19.1 37 37 A G + 0 0 40 3,-0.1 -3,-0.1 1,-0.1 -2,-0.0 0.646 47.0 174.2 117.6 28.3 26.4 -12.8 -18.0 38 38 A N - 0 0 49 1,-0.1 -5,-1.6 -6,-0.1 -1,-0.1 -0.214 31.7-141.7 -63.3 155.5 26.7 -12.3 -14.3 39 39 A K S S+ 0 0 147 -7,-0.2 2,-0.4 1,-0.1 -1,-0.1 0.163 82.2 63.7-104.0 15.9 28.4 -15.0 -12.2 40 40 A T - 0 0 78 2,-0.0 2,-0.4 0, 0.0 -21,-0.3 -0.984 58.9-172.8-144.7 129.9 26.0 -14.6 -9.3 41 41 A L - 0 0 29 -2,-0.4 2,-0.4 -23,-0.1 -23,-0.2 -0.980 15.1-142.6-126.2 134.0 22.3 -15.2 -9.1 42 42 A K E -A 17 0A 101 -25,-1.0 -25,-2.2 -2,-0.4 2,-0.3 -0.798 19.8-126.8 -97.1 132.5 19.9 -14.4 -6.2 43 43 A K E +A 16 0A 145 -2,-0.4 2,-0.3 -27,-0.2 -27,-0.2 -0.590 32.2 178.2 -78.9 133.9 17.1 -16.7 -5.3 44 44 A V E -A 15 0A 31 -29,-2.5 -29,-2.4 -2,-0.3 2,-0.1 -0.999 22.9-127.2-139.9 140.8 13.6 -15.2 -5.1 45 45 A S E -A 14 0A 60 -2,-0.3 2,-0.3 -31,-0.2 -31,-0.2 -0.404 23.1-164.3 -82.5 160.8 10.2 -16.6 -4.4 46 46 A V - 0 0 12 -33,-1.4 2,-0.3 -2,-0.1 -33,-0.2 -0.998 11.2-137.2-148.5 144.1 7.1 -16.0 -6.6 47 47 A T B -C 55 0B 79 8,-1.0 8,-0.6 -2,-0.3 2,-0.4 -0.761 15.0-142.9-103.1 148.4 3.4 -16.4 -6.3 48 48 A I - 0 0 108 -2,-0.3 2,-0.3 6,-0.1 6,-0.1 -0.880 11.6-160.9-112.4 142.5 1.0 -17.9 -8.9 49 49 A N - 0 0 83 4,-0.4 3,-0.2 -2,-0.4 4,-0.1 -0.879 35.3-107.9-121.2 153.3 -2.5 -16.8 -9.7 50 50 A D S S+ 0 0 167 -2,-0.3 -1,-0.1 1,-0.3 -2,-0.0 0.863 124.3 46.8 -42.1 -44.6 -5.4 -18.5 -11.5 51 51 A D S S- 0 0 128 -3,-0.0 -1,-0.3 1,-0.0 -3,-0.0 0.914 122.3-107.9 -66.7 -44.1 -4.8 -16.1 -14.4 52 52 A G + 0 0 52 -3,-0.2 2,-0.3 1,-0.1 -2,-0.1 0.762 59.9 147.8 112.5 67.2 -1.0 -16.7 -14.4 53 53 A T - 0 0 50 -4,-0.1 2,-0.5 -6,-0.0 -4,-0.4 -0.873 39.2-128.1-127.8 160.9 1.0 -13.8 -13.1 54 54 A L - 0 0 102 -2,-0.3 2,-0.4 -6,-0.1 -6,-0.1 -0.934 21.2-174.9-113.8 129.5 4.2 -13.3 -11.2 55 55 A H B -C 47 0B 108 -8,-0.6 -8,-1.0 -2,-0.5 2,-0.5 -0.982 4.4-174.8-127.1 124.2 4.4 -11.2 -8.0 56 56 A M - 0 0 52 -2,-0.4 2,-0.6 -10,-0.1 -10,-0.1 -0.918 21.7-139.2-121.8 105.9 7.7 -10.4 -6.2 57 57 A H - 0 0 174 -2,-0.5 2,-0.2 -12,-0.1 -12,-0.1 -0.481 29.6-172.0 -65.3 108.9 7.4 -8.4 -2.9 58 58 A F - 0 0 149 -2,-0.6 2,-0.5 1,-0.0 3,-0.1 -0.654 29.4 -98.3-103.0 160.4 10.3 -6.0 -3.0 59 59 A S - 0 0 108 -2,-0.2 -1,-0.0 1,-0.1 -2,-0.0 -0.665 48.7-102.7 -81.3 121.7 11.5 -3.6 -0.2 60 60 A R - 0 0 239 -2,-0.5 -1,-0.1 1,-0.1 0, 0.0 0.028 39.6-139.9 -39.2 145.3 10.2 -0.1 -0.6 61 61 A N - 0 0 122 -3,-0.1 2,-1.2 2,-0.0 -1,-0.1 -0.832 22.9 -96.2-115.9 153.7 12.7 2.3 -2.1 62 62 A P + 0 0 125 0, 0.0 2,-0.8 0, 0.0 -2,-0.0 -0.516 47.4 171.5 -69.7 95.1 13.5 6.0 -1.2 63 63 A K - 0 0 194 -2,-1.2 -2,-0.0 2,-0.0 -3,-0.0 -0.753 14.8-163.4-110.2 84.6 11.5 7.9 -3.8 64 64 A V - 0 0 136 -2,-0.8 2,-0.3 1,-0.1 0, 0.0 0.075 7.1-140.5 -56.0 174.7 11.7 11.6 -2.8 65 65 A L - 0 0 120 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.977 1.3-132.4-142.6 154.5 9.3 14.1 -4.2 66 66 A N - 0 0 119 -2,-0.3 2,-0.1 1,-0.1 0, 0.0 -0.722 32.8 -95.4-107.3 157.7 9.5 17.7 -5.5 67 67 A P - 0 0 120 0, 0.0 2,-0.1 0, 0.0 -1,-0.1 -0.355 37.7-130.3 -69.7 148.1 7.2 20.7 -4.7 68 68 A R - 0 0 205 1,-0.1 2,-0.2 -2,-0.1 0, 0.0 -0.447 18.3-151.4 -94.5 170.2 4.3 21.6 -7.0 69 69 A G - 0 0 76 -2,-0.1 2,-0.3 0, 0.0 -1,-0.1 -0.435 7.8-120.3-124.4-161.1 3.3 24.9 -8.5 70 70 A L - 0 0 164 -2,-0.2 2,-0.3 2,-0.0 0, 0.0 -0.965 12.4-131.6-145.9 160.6 0.3 26.8 -9.7 71 71 A R - 0 0 218 -2,-0.3 2,-0.2 0, 0.0 0, 0.0 -0.828 19.7-171.1-115.5 154.2 -1.1 28.5 -12.8 72 72 A Y - 0 0 200 -2,-0.3 2,-0.3 0, 0.0 -2,-0.0 -0.788 5.2-152.1-134.2 177.1 -2.6 31.9 -13.4 73 73 A S - 0 0 75 -2,-0.2 2,-0.3 2,-0.0 0, 0.0 -0.871 3.5-156.9-144.3 175.9 -4.3 33.9 -16.1 74 74 A S - 0 0 117 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.878 5.5-170.0-147.7 178.1 -4.9 37.5 -17.3 75 75 A G - 0 0 60 -2,-0.3 -2,-0.0 1,-0.2 0, 0.0 -0.806 35.7 -51.2-154.1-165.1 -7.3 39.7 -19.3 76 76 A P - 0 0 138 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.057 31.9-147.8 -69.7-175.2 -7.9 43.1 -21.0 77 77 A S - 0 0 117 1,-0.4 2,-0.3 0, 0.0 0, 0.0 0.668 56.3 -52.8-122.3 -54.0 -7.5 46.5 -19.4 78 78 A S 0 0 116 0, 0.0 -1,-0.4 0, 0.0 0, 0.0 -0.972 360.0 360.0-174.7 179.8 -10.1 48.9 -20.9 79 79 A G 0 0 126 -2,-0.3 0, 0.0 -3,-0.1 0, 0.0 -0.102 360.0 360.0 165.4 360.0 -11.5 50.4 -24.0