==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 19-MAY-05 2COW . COMPND 2 MOLECULE: KINESIN-LIKE PROTEIN KIF13B; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 100 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7842.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 39.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 21.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 137 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 105.6 28.5 -4.2 -29.9 2 2 A S - 0 0 119 4,-0.0 2,-0.1 0, 0.0 4,-0.1 -0.812 360.0-171.1-157.2 110.4 30.4 -3.6 -26.6 3 3 A S - 0 0 105 2,-0.4 0, 0.0 -2,-0.3 0, 0.0 -0.286 42.3 -94.6 -92.1-179.4 29.8 -0.8 -24.1 4 4 A G S S+ 0 0 81 -2,-0.1 2,-0.2 2,-0.0 -1,-0.1 0.937 107.4 62.8 -61.8 -48.7 31.9 0.2 -21.1 5 5 A S + 0 0 115 2,-0.0 -2,-0.4 0, 0.0 2,-0.3 -0.510 64.7 162.6 -80.2 147.4 29.8 -1.9 -18.6 6 6 A S + 0 0 118 -2,-0.2 2,-0.2 -4,-0.1 -4,-0.0 -0.948 19.4 75.0-164.8 142.5 29.7 -5.7 -19.0 7 7 A G - 0 0 80 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.570 59.2 -94.6 134.6 161.9 28.7 -8.7 -16.9 8 8 A Q - 0 0 169 -2,-0.2 -2,-0.0 2,-0.0 0, 0.0 -0.728 17.6-168.5-109.7 160.0 25.8 -10.6 -15.4 9 9 A A - 0 0 93 -2,-0.3 2,-0.3 0, 0.0 -2,-0.0 -0.448 9.6-168.1-146.9 67.0 24.0 -10.4 -12.1 10 10 A L + 0 0 141 1,-0.2 3,-0.1 3,-0.0 -2,-0.0 -0.416 35.9 127.5 -61.6 118.3 21.6 -13.3 -11.6 11 11 A A + 0 0 95 -2,-0.3 2,-0.4 1,-0.1 -1,-0.2 0.487 69.7 1.1-134.5 -68.9 19.5 -12.5 -8.5 12 12 A S S S+ 0 0 101 1,-0.1 -1,-0.1 2,-0.1 4,-0.0 -0.964 74.1 112.1-138.0 119.1 15.7 -12.7 -9.0 13 13 A D + 0 0 157 -2,-0.4 3,-0.1 -3,-0.1 -1,-0.1 0.103 70.0 58.6-174.7 36.6 14.0 -13.7 -12.2 14 14 A S S S+ 0 0 118 1,-0.2 2,-0.9 0, 0.0 -2,-0.1 0.522 96.2 48.0-135.7 -55.4 12.3 -17.1 -11.7 15 15 A E - 0 0 176 2,-0.0 2,-0.8 0, 0.0 -1,-0.2 -0.819 64.4-178.7-101.1 98.8 9.8 -17.0 -8.9 16 16 A E + 0 0 187 -2,-0.9 2,-0.2 -3,-0.1 -4,-0.0 -0.852 21.3 141.7-101.8 106.2 7.6 -13.9 -9.3 17 17 A A - 0 0 60 -2,-0.8 2,-0.8 34,-0.0 -2,-0.0 -0.700 63.5 -91.0-131.1-176.8 5.0 -13.6 -6.5 18 18 A D + 0 0 60 -2,-0.2 2,-0.1 2,-0.0 34,-0.1 -0.378 52.1 179.8 -95.9 54.5 3.4 -11.0 -4.3 19 19 A E - 0 0 164 -2,-0.8 -2,-0.0 1,-0.1 33,-0.0 -0.368 24.3-134.6 -59.7 125.3 6.0 -11.1 -1.5 20 20 A V - 0 0 59 -2,-0.1 -1,-0.1 1,-0.1 -2,-0.0 -0.752 21.2-131.0 -87.7 112.2 5.0 -8.7 1.2 21 21 A P - 0 0 42 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.061 12.2-122.1 -52.9 169.3 8.1 -6.7 2.3 22 22 A E S S+ 0 0 192 1,-0.2 -2,-0.0 3,-0.0 0, 0.0 0.800 109.9 57.1 -85.6 -32.4 9.0 -6.3 6.0 23 23 A W S S+ 0 0 60 2,-0.0 2,-0.3 5,-0.0 -1,-0.2 0.780 83.5 101.9 -68.9 -27.1 8.9 -2.5 6.0 24 24 A L + 0 0 11 66,-0.1 2,-0.3 68,-0.0 5,-0.0 -0.440 52.1 118.9 -63.1 118.9 5.3 -2.6 4.7 25 25 A R > - 0 0 155 -2,-0.3 3,-0.9 3,-0.1 15,-0.3 -0.972 67.6 -63.6-172.7 163.7 3.0 -1.9 7.7 26 26 A E T 3 S+ 0 0 132 -2,-0.3 15,-0.2 1,-0.2 3,-0.1 -0.283 118.0 26.2 -58.6 138.4 0.3 0.4 9.1 27 27 A G T 3 S+ 0 0 47 13,-2.9 2,-0.5 1,-0.2 -1,-0.2 0.754 92.5 129.0 79.0 24.9 1.6 3.9 9.6 28 28 A E < - 0 0 55 -3,-0.9 12,-2.1 12,-0.4 -1,-0.2 -0.961 57.1-128.3-118.8 125.7 4.3 3.6 7.0 29 29 A F E +A 39 0A 129 -2,-0.5 64,-1.0 10,-0.2 65,-0.3 -0.446 40.3 157.0 -70.6 139.2 4.7 6.2 4.2 30 30 A V E -AB 38 92A 2 8,-0.8 8,-2.2 62,-0.2 2,-0.3 -0.936 28.4-133.6-153.3 173.5 4.9 4.8 0.6 31 31 A T E -AB 37 91A 45 60,-1.9 60,-2.1 -2,-0.3 2,-0.3 -0.887 11.1-143.4-133.0 163.7 4.3 5.7 -3.0 32 32 A V - 0 0 12 4,-0.8 3,-0.3 -2,-0.3 4,-0.3 -0.873 24.0-119.3-126.9 159.9 2.6 4.1 -6.1 33 33 A G S S- 0 0 56 -2,-0.3 -1,-0.1 1,-0.2 3,-0.1 0.932 109.4 -1.9 -62.1 -48.0 3.4 4.0 -9.8 34 34 A A S S+ 0 0 80 55,-0.1 -1,-0.2 2,-0.1 55,-0.0 -0.239 123.0 71.5-140.6 47.7 0.2 5.8 -10.8 35 35 A H S S- 0 0 64 -3,-0.3 -2,-0.1 1,-0.2 -1,-0.1 0.102 89.7-125.2-148.5 22.1 -1.7 6.5 -7.6 36 36 A K - 0 0 118 -4,-0.3 -4,-0.8 -3,-0.1 -1,-0.2 0.005 51.3 -42.7 57.2-169.6 0.4 9.2 -5.9 37 37 A T E +A 31 0A 87 -6,-0.2 23,-0.3 53,-0.0 2,-0.2 -0.403 62.0 165.6 -87.3 166.6 1.7 8.8 -2.3 38 38 A G E -A 30 0A 8 -8,-2.2 -8,-0.8 20,-0.2 2,-0.3 -0.860 34.8-110.4-179.6 143.5 -0.3 7.3 0.6 39 39 A V E -AC 29 57A 22 18,-1.3 18,-3.4 -2,-0.2 2,-0.4 -0.612 39.7-110.2 -84.0 140.2 0.1 6.0 4.1 40 40 A V E + C 0 56A 0 -12,-2.1 -13,-2.9 -15,-0.3 -12,-0.4 -0.548 44.8 160.5 -72.1 122.9 -0.5 2.3 4.7 41 41 A R E + 0 0 113 14,-3.6 2,-0.3 -2,-0.4 15,-0.2 0.647 65.3 30.3-112.7 -28.4 -3.7 1.7 6.7 42 42 A Y E + C 0 55A 86 13,-1.5 13,-2.1 -17,-0.1 -1,-0.3 -0.991 54.9 179.0-136.8 144.0 -4.4 -1.9 6.0 43 43 A V E + C 0 54A 50 -2,-0.3 11,-0.2 11,-0.2 -17,-0.1 -0.792 40.5 81.9-148.1 100.0 -2.2 -4.9 5.2 44 44 A G E S- C 0 53A 13 9,-1.9 9,-1.1 -2,-0.3 8,-0.1 -0.926 73.1 -66.5 175.0 161.9 -3.6 -8.4 4.5 45 45 A P - 0 0 86 0, 0.0 2,-0.2 0, 0.0 7,-0.2 0.143 49.1-128.9 -52.6 176.6 -5.3 -10.7 2.0 46 46 A A - 0 0 26 3,-0.6 5,-0.1 5,-0.4 0, 0.0 -0.610 8.8-132.5-122.6-176.8 -8.8 -10.1 0.6 47 47 A D S S+ 0 0 129 -2,-0.2 -1,-0.1 3,-0.1 3,-0.0 0.689 105.4 41.1-108.8 -30.9 -12.1 -12.0 0.2 48 48 A F S S+ 0 0 99 21,-0.1 2,-0.3 1,-0.1 22,-0.0 0.783 122.4 36.3 -87.5 -31.2 -12.9 -11.1 -3.4 49 49 A Q S S- 0 0 97 2,-0.1 -3,-0.6 0, 0.0 2,-0.2 -0.830 80.4-121.0-121.6 160.5 -9.3 -11.6 -4.6 50 50 A E S S+ 0 0 168 -2,-0.3 2,-0.3 -5,-0.1 -3,-0.1 -0.566 70.6 31.4 -97.5 163.0 -6.5 -13.9 -3.7 51 51 A G S S- 0 0 38 -2,-0.2 2,-0.4 -5,-0.1 -5,-0.4 -0.726 100.6 -38.6 97.8-145.7 -3.0 -13.0 -2.5 52 52 A T - 0 0 34 -2,-0.3 2,-0.3 -7,-0.2 -2,-0.1 -0.977 49.8-162.7-127.5 138.4 -2.2 -10.0 -0.3 53 53 A W E -C 44 0A 31 -9,-1.1 -9,-1.9 -2,-0.4 2,-0.4 -0.788 7.0-150.5-116.5 160.4 -3.5 -6.5 -0.4 54 54 A V E -CD 43 85A 0 31,-2.5 31,-2.1 -2,-0.3 2,-0.7 -0.930 11.3-143.2-135.9 110.9 -2.3 -3.2 1.0 55 55 A G E -CD 42 84A 0 -13,-2.1 -14,-3.6 -2,-0.4 -13,-1.5 -0.614 20.5-169.8 -76.3 112.4 -4.7 -0.4 2.0 56 56 A V E -CD 40 83A 0 27,-1.6 27,-0.9 -2,-0.7 2,-0.6 -0.907 14.2-141.7-107.9 124.1 -3.1 2.9 1.1 57 57 A E E -C 39 0A 22 -18,-3.4 -18,-1.3 -2,-0.5 2,-0.7 -0.729 12.3-152.8 -86.5 121.0 -4.7 6.2 2.3 58 58 A L - 0 0 5 -2,-0.6 -20,-0.2 23,-0.5 4,-0.1 -0.840 8.2-158.8 -98.1 115.2 -4.5 9.0 -0.2 59 59 A D S S+ 0 0 157 -2,-0.7 -1,-0.2 -22,-0.2 -21,-0.1 0.813 81.7 58.4 -58.9 -30.5 -4.6 12.5 1.3 60 60 A L S S- 0 0 101 -23,-0.3 2,-0.8 -3,-0.1 -2,-0.1 -0.744 102.1 -98.2-103.1 150.8 -5.8 13.8 -2.0 61 61 A P S S+ 0 0 83 0, 0.0 20,-0.2 0, 0.0 -2,-0.1 -0.539 83.0 104.2 -70.2 106.1 -9.0 12.7 -3.9 62 62 A S + 0 0 59 -2,-0.8 19,-0.1 18,-0.3 -3,-0.1 0.092 51.3 97.9-174.4 37.7 -7.9 10.2 -6.5 63 63 A G - 0 0 35 17,-0.2 20,-0.2 -5,-0.1 3,-0.1 0.036 58.5-137.5-109.0-142.4 -8.8 6.7 -5.3 64 64 A K S S+ 0 0 181 18,-1.4 2,-0.4 1,-0.4 19,-0.2 0.370 77.2 59.6-149.0 -54.6 -11.7 4.3 -5.9 65 65 A N - 0 0 14 17,-0.4 2,-1.4 1,-0.1 -1,-0.4 -0.756 68.4-141.3 -92.6 132.1 -13.0 2.7 -2.8 66 66 A D S S- 0 0 88 -2,-0.4 11,-0.1 2,-0.4 3,-0.1 -0.317 75.8 -61.0 -86.2 53.3 -14.4 4.9 0.0 67 67 A G S S+ 0 0 2 -2,-1.4 7,-1.7 1,-0.1 8,-1.4 -0.119 125.7 65.2 98.1 -37.6 -12.8 2.7 2.7 68 68 A S E -E 73 0B 43 5,-0.2 2,-0.4 6,-0.2 -2,-0.4 -0.837 62.9-155.2-119.8 157.9 -14.8 -0.4 1.8 69 69 A I E > S-E 72 0B 38 3,-2.9 3,-0.7 -2,-0.3 -21,-0.1 -0.978 75.7 -14.3-136.7 122.3 -14.8 -2.7 -1.3 70 70 A G T 3 S- 0 0 87 -2,-0.4 2,-0.5 1,-0.3 3,-0.1 0.801 128.5 -54.0 59.5 29.3 -17.7 -4.9 -2.4 71 71 A G T 3 S+ 0 0 64 1,-0.3 -1,-0.3 0, 0.0 2,-0.0 -0.464 116.5 103.4 105.8 -60.8 -19.3 -4.4 1.0 72 72 A K E < -E 69 0B 118 -3,-0.7 -3,-2.9 -2,-0.5 2,-0.3 -0.322 59.4-151.1 -60.0 135.4 -16.5 -5.5 3.3 73 73 A Q E +E 68 0B 99 -5,-0.3 -5,-0.2 1,-0.1 3,-0.1 -0.777 26.9 168.6-110.7 155.5 -14.7 -2.5 4.9 74 74 A Y + 0 0 42 -7,-1.7 2,-0.3 1,-0.4 -6,-0.2 0.604 68.6 11.3-128.6 -48.3 -11.1 -2.2 6.1 75 75 A F - 0 0 18 -8,-1.4 -1,-0.4 -33,-0.1 2,-0.4 -0.991 57.7-157.9-140.2 147.0 -10.5 1.4 6.9 76 76 A R + 0 0 189 -2,-0.3 -9,-0.1 1,-0.1 -10,-0.0 -0.989 38.4 121.6-129.3 132.9 -12.6 4.6 7.3 77 77 A C S S- 0 0 79 -2,-0.4 -1,-0.1 -11,-0.1 5,-0.1 0.371 76.2 -24.9-149.9 -51.2 -11.5 8.2 7.0 78 78 A N > - 0 0 98 3,-0.0 3,-1.2 0, 0.0 2,-0.6 -0.926 65.9 -90.5-172.8 147.9 -13.5 10.0 4.3 79 79 A P T 3 S+ 0 0 95 0, 0.0 -13,-0.1 0, 0.0 -14,-0.0 -0.530 113.6 15.9 -69.6 112.2 -15.4 9.4 1.0 80 80 A G T 3 S+ 0 0 22 -2,-0.6 -18,-0.3 -15,-0.1 -17,-0.2 0.740 104.4 90.1 96.9 28.2 -13.0 9.6 -1.9 81 81 A Y < + 0 0 84 -3,-1.2 -23,-0.5 -20,-0.2 2,-0.3 -0.053 69.2 80.8-143.9 33.7 -9.8 9.4 0.1 82 82 A G + 0 0 1 -17,-0.3 -18,-1.4 -25,-0.2 -17,-0.4 -0.984 43.0 168.7-143.5 153.9 -9.0 5.6 0.2 83 83 A L E -D 56 0A 11 -27,-0.9 -27,-1.6 -2,-0.3 2,-0.4 -0.988 20.7-146.1-159.9 157.5 -7.6 2.9 -2.0 84 84 A L E +D 55 0A 16 -2,-0.3 2,-0.3 -29,-0.3 -29,-0.2 -0.926 27.2 162.2-135.8 110.1 -6.3 -0.7 -1.9 85 85 A V E -D 54 0A 15 -31,-2.1 -31,-2.5 -2,-0.4 -2,-0.0 -0.794 39.3 -95.7-122.8 165.9 -3.4 -1.9 -4.0 86 86 A R > - 0 0 53 -2,-0.3 3,-2.2 -33,-0.2 -33,-0.2 -0.378 39.2-105.7 -78.1 158.6 -1.1 -4.9 -4.0 87 87 A P G > S+ 0 0 7 0, 0.0 3,-1.7 0, 0.0 -1,-0.1 0.821 120.3 64.7 -51.9 -33.7 2.4 -4.7 -2.4 88 88 A S G 3 S+ 0 0 77 1,-0.3 -69,-0.0 3,-0.0 -68,-0.0 0.780 99.0 53.7 -61.8 -26.7 3.9 -4.6 -5.9 89 89 A R G < S+ 0 0 136 -3,-2.2 2,-0.4 -57,-0.1 -1,-0.3 -0.018 100.6 78.0 -97.7 28.8 2.2 -1.2 -6.3 90 90 A V < + 0 0 7 -3,-1.7 2,-0.3 -58,-0.1 -58,-0.2 -0.982 54.3 176.5-142.6 127.8 3.8 0.1 -3.1 91 91 A R E -B 31 0A 136 -60,-2.1 -60,-1.9 -2,-0.4 2,-0.3 -0.886 36.1 -96.7-128.4 159.2 7.3 1.4 -2.5 92 92 A R E +B 30 0A 156 -2,-0.3 -62,-0.2 -62,-0.2 -68,-0.0 -0.550 35.3 174.1 -76.7 136.3 9.2 2.9 0.4 93 93 A A - 0 0 42 -64,-1.0 -1,-0.2 -2,-0.3 -63,-0.1 0.824 7.5-176.3-105.1 -59.4 9.4 6.7 0.4 94 94 A T + 0 0 98 -65,-0.3 -2,-0.1 1,-0.1 -64,-0.0 0.845 26.2 177.6 60.5 34.4 11.0 7.8 3.7 95 95 A S + 0 0 106 1,-0.1 -66,-0.1 2,-0.0 -1,-0.1 0.018 39.6 80.1 -60.2 174.0 10.5 11.4 2.8 96 96 A G + 0 0 42 0, 0.0 -1,-0.1 0, 0.0 4,-0.1 0.941 41.3 170.5 88.5 61.2 11.4 14.3 5.1 97 97 A P S S- 0 0 127 0, 0.0 3,-0.1 0, 0.0 -2,-0.0 0.867 85.2 -18.7 -69.7 -37.6 15.2 14.7 4.7 98 98 A S S S+ 0 0 122 1,-0.1 2,-0.1 0, 0.0 0, 0.0 0.534 131.9 45.0-135.7 -47.2 15.3 17.9 6.7 99 99 A S 0 0 98 1,-0.0 -1,-0.1 0, 0.0 0, 0.0 -0.274 360.0 360.0 -95.1-176.0 11.7 19.4 6.9 100 100 A G 0 0 147 -2,-0.1 -5,-0.0 -3,-0.1 -1,-0.0 -0.297 360.0 360.0-137.7 360.0 8.4 17.7 7.6