==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 06-MAY-99 1CPZ . COMPND 2 MOLECULE: PROTEIN (COPZ); . SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS HIRAE; . AUTHOR R.WIMMER,T.HERRMANN,M.SOLIOZ,K.WUETHRICH . 68 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4612.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 60.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 22.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 17 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 99 0, 0.0 2,-0.2 0, 0.0 42,-0.1 0.000 360.0 360.0 360.0 155.4 -6.4 -5.3 -6.8 2 2 A Q - 0 0 65 40,-0.2 40,-2.0 42,-0.1 2,-0.3 -0.549 360.0-159.5 -90.2 156.5 -7.3 -3.6 -3.5 3 3 A E E -A 41 0A 83 38,-0.2 65,-2.2 -2,-0.2 2,-0.3 -0.919 3.5-154.6-134.4 159.5 -6.8 0.1 -2.8 4 4 A F E -AB 40 67A 0 36,-2.1 36,-3.2 -2,-0.3 2,-0.4 -0.986 15.1-128.8-137.5 146.5 -6.5 2.4 0.2 5 5 A S E - B 0 66A 14 61,-3.5 61,-1.7 -2,-0.3 2,-0.5 -0.810 18.8-150.1 -97.6 132.2 -7.1 6.0 0.9 6 6 A V E + B 0 65A 0 -2,-0.4 59,-0.2 32,-0.4 3,-0.2 -0.885 20.9 171.5-104.7 128.9 -4.5 8.1 2.6 7 7 A K S S+ 0 0 120 57,-4.0 58,-0.1 -2,-0.5 -1,-0.1 -0.304 72.4 57.3-129.0 46.7 -5.5 11.0 4.8 8 8 A G + 0 0 27 56,-0.3 -1,-0.1 55,-0.1 2,-0.1 0.112 68.6 141.5-161.8 24.1 -2.1 11.9 6.3 9 9 A M - 0 0 44 -3,-0.2 54,-0.0 55,-0.1 26,-0.0 -0.390 26.4-177.2 -75.1 153.3 0.2 12.6 3.4 10 10 A S - 0 0 75 -2,-0.1 -1,-0.1 53,-0.0 3,-0.0 0.648 38.8-122.7-118.2 -36.1 2.7 15.4 3.4 11 11 A C S S+ 0 0 78 1,-0.0 -2,-0.0 0, 0.0 24,-0.0 0.910 76.1 110.9 87.6 53.4 4.2 15.2 -0.0 12 12 A N S S- 0 0 98 0, 0.0 -1,-0.0 0, 0.0 5,-0.0 -0.416 107.5 -48.6-156.6 69.1 7.8 14.7 0.9 13 13 A H S > S+ 0 0 145 -3,-0.0 4,-3.4 3,-0.0 5,-0.1 0.448 112.2 112.5 77.6 0.3 9.0 11.2 0.0 14 14 A C H > + 0 0 6 2,-0.2 4,-4.1 1,-0.2 5,-0.3 0.982 69.4 53.8 -66.0 -59.0 5.9 10.0 1.7 15 15 A V H > S+ 0 0 37 1,-0.2 4,-3.1 2,-0.2 -1,-0.2 0.879 117.0 40.3 -40.6 -49.4 4.3 8.8 -1.5 16 16 A A H > S+ 0 0 36 2,-0.2 4,-4.4 1,-0.2 5,-0.5 0.973 113.1 52.6 -65.3 -56.7 7.4 6.8 -2.0 17 17 A R H X S+ 0 0 154 -4,-3.4 4,-3.6 1,-0.2 -2,-0.2 0.886 115.6 42.8 -44.7 -48.2 7.8 5.8 1.6 18 18 A I H X S+ 0 0 0 -4,-4.1 4,-3.2 2,-0.2 5,-0.2 0.976 116.2 46.4 -63.5 -57.7 4.3 4.5 1.5 19 19 A E H X S+ 0 0 53 -4,-3.1 4,-3.2 -5,-0.3 -2,-0.2 0.928 121.5 38.2 -49.4 -53.6 4.6 2.8 -1.8 20 20 A E H X S+ 0 0 136 -4,-4.4 4,-1.4 2,-0.2 -1,-0.2 0.916 114.2 54.7 -64.7 -45.4 7.9 1.3 -0.8 21 21 A A H < S+ 0 0 23 -4,-3.6 -1,-0.2 -5,-0.5 -2,-0.2 0.850 113.6 44.2 -56.3 -35.8 6.7 0.6 2.7 22 22 A V H >< S+ 0 0 0 -4,-3.2 3,-3.7 1,-0.2 6,-0.2 0.957 107.8 54.7 -73.1 -54.0 3.8 -1.2 1.1 23 23 A G H 3< S+ 0 0 32 -4,-3.2 4,-0.2 1,-0.3 -1,-0.2 0.694 98.9 67.6 -52.8 -18.9 5.8 -3.1 -1.5 24 24 A R T 3< S+ 0 0 208 -4,-1.4 2,-0.5 -5,-0.2 -1,-0.3 0.680 73.6 108.4 -75.1 -18.8 7.8 -4.3 1.6 25 25 A I S X S- 0 0 19 -3,-3.7 3,-2.9 -4,-0.2 2,-1.2 -0.480 83.2-120.3 -64.3 113.5 4.7 -6.2 2.7 26 26 A S T 3 S+ 0 0 100 -2,-0.5 -1,-0.1 1,-0.3 -2,-0.1 -0.394 104.1 38.7 -59.4 94.1 5.6 -9.8 2.1 27 27 A G T 3 S+ 0 0 19 -2,-1.2 18,-0.6 1,-0.4 2,-0.4 0.122 85.4 110.1 149.1 -18.6 2.9 -10.7 -0.3 28 28 A V E < -C 44 0A 17 -3,-2.9 -1,-0.4 -6,-0.2 16,-0.3 -0.723 42.1-171.5 -87.9 130.8 2.6 -7.6 -2.5 29 29 A K E S- 0 0 172 14,-2.4 2,-0.3 -2,-0.4 15,-0.2 0.901 72.5 -11.1 -84.6 -48.2 3.9 -7.9 -6.0 30 30 A K E -C 43 0A 135 13,-1.1 13,-1.7 2,-0.0 -1,-0.4 -0.976 62.5-172.7-156.1 141.2 3.7 -4.3 -7.0 31 31 A V E -C 42 0A 17 -2,-0.3 2,-0.3 11,-0.2 11,-0.2 -0.966 3.3-174.9-136.8 151.6 2.2 -1.1 -5.4 32 32 A K E -C 41 0A 133 9,-3.2 9,-1.4 -2,-0.3 2,-0.3 -0.891 11.2-146.4-140.1 168.3 1.8 2.4 -6.5 33 33 A V E -C 40 0A 15 -2,-0.3 2,-0.6 7,-0.2 7,-0.2 -0.999 3.0-153.3-142.2 139.7 0.6 5.8 -5.2 34 34 A Q E >>> -C 39 0A 63 5,-1.8 3,-1.0 -2,-0.3 5,-0.8 -0.930 17.2-146.6-118.4 107.3 -1.1 8.7 -6.8 35 35 A L T 345S+ 0 0 87 -2,-0.6 -2,-0.0 1,-0.2 5,-0.0 -0.188 84.9 27.9 -65.3 161.8 -0.5 12.1 -5.2 36 36 A K T 345S+ 0 0 205 1,-0.1 -1,-0.2 2,-0.0 0, 0.0 0.674 113.5 76.9 58.1 15.8 -3.3 14.7 -5.1 37 37 A K T <45S- 0 0 108 -3,-1.0 -2,-0.2 2,-0.1 -1,-0.1 0.621 87.2-142.8-120.8 -35.9 -5.5 11.6 -5.2 38 38 A E T <5 + 0 0 88 -4,-0.8 -32,-0.4 1,-0.2 2,-0.3 0.893 65.6 101.7 69.0 41.7 -5.3 10.4 -1.6 39 39 A K E < - C 0 34A 84 -5,-0.8 -5,-1.8 -34,-0.3 2,-0.4 -0.983 55.3-152.4-155.6 145.0 -5.3 6.7 -2.7 40 40 A A E -AC 4 33A 0 -36,-3.2 -36,-2.1 -2,-0.3 2,-0.4 -0.977 12.2-142.4-124.7 134.9 -2.8 4.0 -3.1 41 41 A V E -AC 3 32A 50 -9,-1.4 -9,-3.2 -2,-0.4 2,-0.4 -0.814 17.6-168.1 -98.3 133.4 -3.0 1.1 -5.5 42 42 A V E - C 0 31A 0 -40,-2.0 2,-0.3 -2,-0.4 -11,-0.2 -0.930 15.3-161.3-122.3 145.8 -1.7 -2.3 -4.3 43 43 A K E + C 0 30A 129 -13,-1.7 -14,-2.4 -2,-0.4 -13,-1.1 -0.662 47.0 118.0-126.2 74.1 -1.1 -5.5 -6.4 44 44 A F E - C 0 28A 32 -2,-0.3 2,-0.3 -16,-0.3 -16,-0.2 -0.415 53.8-115.8-120.6-163.9 -1.0 -8.3 -3.9 45 45 A D >> - 0 0 98 -18,-0.6 4,-3.1 -2,-0.2 3,-1.5 -0.995 13.0-134.5-143.2 144.7 -2.9 -11.5 -3.2 46 46 A E T 34 S+ 0 0 142 -2,-0.3 4,-0.1 1,-0.3 -1,-0.1 0.613 105.3 71.6 -71.2 -12.4 -5.0 -12.7 -0.2 47 47 A A T 34 S+ 0 0 88 1,-0.1 -1,-0.3 -20,-0.1 3,-0.1 0.335 116.5 20.3 -84.0 6.6 -3.1 -16.0 -0.5 48 48 A N T <4 S- 0 0 103 -3,-1.5 2,-0.3 1,-0.5 -2,-0.2 0.505 135.1 -6.2-136.3 -51.6 -0.1 -14.1 0.8 49 49 A V < - 0 0 18 -4,-3.1 -1,-0.5 -22,-0.3 2,-0.3 -0.973 63.3-117.8-150.4 159.2 -1.3 -11.0 2.6 50 50 A Q > - 0 0 100 -2,-0.3 4,-1.9 1,-0.1 3,-0.3 -0.789 18.4-130.3-103.5 145.5 -4.5 -9.1 3.2 51 51 A A H > S+ 0 0 7 -2,-0.3 4,-2.3 1,-0.2 5,-0.2 0.908 109.8 60.1 -56.0 -44.8 -5.2 -5.5 2.1 52 52 A T H > S+ 0 0 94 1,-0.3 4,-1.3 2,-0.2 -1,-0.2 0.894 106.6 46.1 -49.4 -46.5 -6.4 -4.7 5.6 53 53 A E H > S+ 0 0 103 -3,-0.3 4,-1.8 1,-0.2 -1,-0.3 0.857 108.1 56.9 -65.4 -36.7 -3.0 -5.7 6.9 54 54 A I H X S+ 0 0 0 -4,-1.9 4,-1.1 1,-0.2 -1,-0.2 0.862 101.4 57.2 -62.1 -36.9 -1.4 -3.6 4.1 55 55 A C H >X S+ 0 0 7 -4,-2.3 4,-2.5 1,-0.2 3,-0.7 0.903 104.1 52.9 -60.0 -42.6 -3.3 -0.6 5.4 56 56 A Q H 3X S+ 0 0 88 -4,-1.3 4,-3.6 1,-0.3 -1,-0.2 0.911 101.4 58.2 -58.7 -45.5 -1.7 -1.1 8.8 57 57 A A H 3< S+ 0 0 21 -4,-1.8 -1,-0.3 1,-0.2 -2,-0.2 0.798 110.1 46.4 -54.7 -29.3 1.8 -1.1 7.2 58 58 A I H XX S+ 0 0 0 -4,-1.1 3,-1.8 -3,-0.7 4,-0.8 0.921 113.6 44.6 -78.3 -48.5 0.8 2.3 5.9 59 59 A N H 3< S+ 0 0 57 -4,-2.5 -2,-0.2 1,-0.3 4,-0.2 0.789 101.9 69.5 -65.2 -28.0 -0.6 3.5 9.2 60 60 A E T 3< S+ 0 0 137 -4,-3.6 -1,-0.3 -5,-0.2 -2,-0.2 0.590 96.4 58.8 -65.5 -9.6 2.5 2.0 10.8 61 61 A L T <4 S- 0 0 64 -3,-1.8 -2,-0.2 -5,-0.2 -1,-0.1 0.958 123.6 -84.6 -81.2 -77.2 4.4 4.8 9.0 62 62 A G S < S+ 0 0 56 -4,-0.8 2,-0.2 -54,-0.0 -3,-0.1 0.221 91.8 77.8 168.7 39.2 2.9 8.0 10.3 63 63 A Y S S- 0 0 42 -5,-0.5 2,-0.7 -4,-0.2 -55,-0.1 -0.795 81.7 -82.5-145.1-174.2 -0.3 8.9 8.3 64 64 A Q + 0 0 128 -2,-0.2 -57,-4.0 -3,-0.0 2,-0.4 -0.894 46.7 173.1-105.3 111.8 -3.9 8.0 7.9 65 65 A A E +B 6 0A 9 -2,-0.7 2,-0.3 -59,-0.2 -59,-0.2 -0.936 3.7 172.4-120.2 141.9 -4.6 4.9 5.8 66 66 A E E -B 5 0A 101 -61,-1.7 -61,-3.5 -2,-0.4 2,-0.3 -0.973 37.3-109.9-151.5 132.9 -7.9 3.2 5.2 67 67 A V E B 4 0A 47 -2,-0.3 -63,-0.3 -63,-0.3 -15,-0.0 -0.451 360.0 360.0 -64.0 123.5 -8.9 0.4 2.9 68 68 A I 0 0 96 -65,-2.2 -64,-0.1 -2,-0.3 -1,-0.1 0.794 360.0 360.0 -84.5 360.0 -11.1 1.8 0.2