==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 19-MAY-05 2CPJ . COMPND 2 MOLECULE: NON-POU DOMAIN-CONTAINING OCTAMER-BINDING . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR T.NAGATA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7804.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 53.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 18.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 58 A G 0 0 122 0, 0.0 2,-1.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-103.4 -15.1 -14.7 12.9 2 59 A S + 0 0 142 0, 0.0 2,-0.3 0, 0.0 3,-0.1 -0.637 360.0 146.9 -89.9 81.7 -17.1 -13.8 9.8 3 60 A S + 0 0 105 -2,-1.4 0, 0.0 1,-0.2 0, 0.0 -0.856 38.9 45.7-117.7 152.7 -20.0 -12.0 11.4 4 61 A G - 0 0 39 -2,-0.3 -1,-0.2 4,-0.1 0, 0.0 0.966 52.3-174.9 83.0 66.4 -22.2 -9.1 10.1 5 62 A S S S+ 0 0 136 1,-0.2 -2,-0.1 -3,-0.1 0, 0.0 0.956 87.8 30.7 -56.1 -55.0 -23.0 -10.0 6.5 6 63 A S S S- 0 0 137 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 0.960 141.4 -54.6 -70.0 -53.1 -24.7 -6.6 5.8 7 64 A G - 0 0 61 3,-0.0 2,-0.3 0, 0.0 -4,-0.1 0.142 61.3-170.0-150.3 -86.2 -22.6 -4.6 8.2 8 65 A G - 0 0 53 3,-0.0 2,-0.3 2,-0.0 -4,-0.1 -0.875 49.0 -12.7 117.7-150.1 -22.2 -5.3 11.9 9 66 A E S S- 0 0 169 -2,-0.3 0, 0.0 1,-0.1 0, 0.0 -0.719 86.7 -77.7 -95.4 143.4 -20.6 -3.3 14.7 10 67 A K - 0 0 208 -2,-0.3 2,-0.2 1,-0.1 -1,-0.1 -0.023 61.3-175.7 -37.0 127.3 -18.6 -0.2 14.1 11 68 A T - 0 0 125 1,-0.1 -1,-0.1 -3,-0.1 -3,-0.0 -0.730 29.2 -74.9-125.5 175.1 -15.1 -1.3 13.0 12 69 A F - 0 0 135 -2,-0.2 -1,-0.1 1,-0.1 2,-0.1 -0.231 47.6-123.4 -67.6 159.4 -11.8 0.4 12.2 13 70 A T - 0 0 98 1,-0.0 3,-0.2 0, 0.0 2,-0.1 -0.340 14.3-116.2 -96.5-179.7 -11.3 2.3 8.9 14 71 A Q > + 0 0 72 1,-0.2 3,-0.5 -2,-0.1 73,-0.1 -0.412 62.9 131.8-115.7 54.8 -8.8 1.8 6.1 15 72 A R T 3 + 0 0 135 1,-0.2 73,-0.3 -2,-0.1 2,-0.3 0.706 65.8 67.6 -76.7 -20.5 -6.9 5.1 6.3 16 73 A S T 3 S+ 0 0 19 -3,-0.2 42,-1.5 42,-0.2 2,-0.7 -0.200 70.7 134.5 -93.1 42.3 -3.6 3.3 6.2 17 74 A R E < -A 57 0A 58 -3,-0.5 69,-1.9 -2,-0.3 70,-0.9 -0.839 40.2-158.7 -98.0 114.4 -4.1 2.1 2.6 18 75 A L E -AB 56 85A 0 38,-2.7 38,-2.5 -2,-0.7 2,-0.5 -0.759 7.4-142.3 -94.7 135.8 -1.1 2.6 0.4 19 76 A F E -AB 55 84A 15 65,-1.8 65,-1.9 -2,-0.4 2,-0.5 -0.841 11.6-163.2-100.6 129.2 -1.5 2.8 -3.4 20 77 A V E +AB 54 83A 7 34,-2.2 34,-2.1 -2,-0.5 3,-0.2 -0.943 13.8 175.5-115.7 118.0 1.1 1.1 -5.6 21 78 A G E + B 0 82A 1 61,-2.5 61,-1.9 -2,-0.5 32,-0.1 -0.672 53.9 41.6-115.5 171.5 1.3 2.1 -9.3 22 79 A N S S+ 0 0 86 30,-0.5 -1,-0.2 -2,-0.2 31,-0.1 0.897 75.3 176.2 60.9 41.9 3.6 1.3 -12.2 23 80 A L - 0 0 23 29,-0.6 -1,-0.2 -3,-0.2 58,-0.1 -0.564 29.8-111.2 -81.7 141.9 3.7 -2.4 -11.2 24 81 A P > - 0 0 3 0, 0.0 3,-1.1 0, 0.0 -1,-0.1 -0.281 22.4-114.6 -69.7 155.0 5.5 -4.9 -13.4 25 82 A P T 3 S+ 0 0 115 0, 0.0 -2,-0.0 0, 0.0 24,-0.0 0.433 114.3 62.4 -69.8 2.6 3.7 -7.6 -15.4 26 83 A D T 3 S+ 0 0 76 2,-0.0 2,-0.5 5,-0.0 5,-0.1 -0.102 76.4 116.7-119.0 33.1 5.5 -10.1 -13.1 27 84 A I < + 0 0 20 -3,-1.1 2,-0.3 -4,-0.1 -4,-0.0 -0.901 36.8 173.6-108.0 127.7 4.0 -9.0 -9.8 28 85 A T > - 0 0 77 -2,-0.5 4,-2.1 1,-0.0 5,-0.2 -0.847 51.0 -95.0-128.0 164.5 1.8 -11.4 -7.8 29 86 A E H > S+ 0 0 126 -2,-0.3 4,-2.2 1,-0.2 5,-0.1 0.799 125.3 56.6 -46.0 -31.3 0.1 -11.4 -4.4 30 87 A E H > S+ 0 0 122 2,-0.2 4,-2.5 1,-0.2 5,-0.3 0.978 103.8 48.0 -66.5 -58.0 3.2 -13.3 -3.2 31 88 A E H > S+ 0 0 62 1,-0.2 4,-2.5 2,-0.2 -2,-0.2 0.883 112.9 51.6 -50.2 -42.8 5.8 -10.7 -4.4 32 89 A M H X S+ 0 0 3 -4,-2.1 4,-1.8 2,-0.2 -1,-0.2 0.965 108.6 48.0 -60.0 -55.5 3.7 -8.0 -2.7 33 90 A R H < S+ 0 0 134 -4,-2.2 -1,-0.2 1,-0.2 -2,-0.2 0.863 116.0 46.0 -53.9 -38.2 3.5 -9.8 0.7 34 91 A K H >< S+ 0 0 108 -4,-2.5 3,-1.5 1,-0.2 -1,-0.2 0.845 106.0 59.0 -74.1 -34.8 7.2 -10.4 0.5 35 92 A L H 3< S+ 0 0 29 -4,-2.5 3,-0.3 1,-0.3 -2,-0.2 0.829 114.2 37.8 -63.1 -32.3 7.9 -6.8 -0.5 36 93 A F T 3< S+ 0 0 7 -4,-1.8 -1,-0.3 1,-0.2 3,-0.2 -0.119 81.0 114.0-110.4 34.3 6.2 -5.6 2.7 37 94 A E S X S+ 0 0 135 -3,-1.5 3,-0.6 1,-0.2 -1,-0.2 0.694 73.4 58.5 -76.4 -19.5 7.6 -8.4 4.9 38 95 A K T 3 S+ 0 0 130 -3,-0.3 -1,-0.2 1,-0.2 -2,-0.1 0.766 110.2 41.4 -79.8 -27.2 9.6 -5.9 6.8 39 96 A Y T 3 S- 0 0 10 1,-0.4 -1,-0.2 -3,-0.2 -2,-0.2 0.080 123.0-102.1-106.3 21.2 6.5 -3.9 7.8 40 97 A G < - 0 0 36 -3,-0.6 -1,-0.4 18,-0.1 2,-0.3 0.036 57.5 -42.9 80.2 166.9 4.5 -7.1 8.5 41 98 A K - 0 0 148 -4,-0.1 18,-0.2 -3,-0.1 2,-0.2 -0.525 64.4-116.7 -71.7 128.5 1.8 -8.7 6.4 42 99 A A - 0 0 5 -2,-0.3 16,-0.3 1,-0.1 3,-0.1 -0.449 13.1-136.8 -67.4 131.4 -0.6 -6.2 4.9 43 100 A G S S+ 0 0 37 14,-1.5 2,-0.4 1,-0.2 15,-0.2 0.892 92.7 28.8 -54.7 -43.0 -4.2 -6.6 6.1 44 101 A E E +C 57 0A 63 13,-1.5 13,-2.2 2,-0.0 2,-0.4 -0.982 67.9 174.7-126.7 125.2 -5.5 -6.2 2.6 45 102 A V E +C 56 0A 22 -2,-0.4 2,-0.4 11,-0.2 11,-0.2 -0.953 6.4 163.3-133.6 114.8 -3.6 -7.1 -0.6 46 103 A F E -C 55 0A 132 9,-2.1 9,-2.5 -2,-0.4 2,-0.5 -0.990 12.4-171.3-135.0 126.9 -5.2 -6.9 -4.1 47 104 A I E -C 54 0A 42 -2,-0.4 2,-0.5 7,-0.2 7,-0.2 -0.969 3.0-168.1-121.8 123.1 -3.4 -6.9 -7.4 48 105 A H E >> -C 53 0A 96 5,-3.1 5,-2.4 -2,-0.5 4,-0.9 -0.935 9.9-178.0-113.3 126.6 -5.1 -6.1 -10.7 49 106 A K T 45S+ 0 0 177 -2,-0.5 -1,-0.2 3,-0.2 -26,-0.0 0.945 79.7 64.0 -83.5 -57.5 -3.4 -6.8 -14.1 50 107 A D T 45S+ 0 0 142 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.797 124.5 23.5 -35.6 -36.9 -6.0 -5.6 -16.5 51 108 A K T 45S- 0 0 147 2,-0.1 -1,-0.3 0, 0.0 -2,-0.2 0.674 105.7-130.9-103.8 -26.0 -5.4 -2.2 -14.9 52 109 A G T <5 + 0 0 25 -4,-0.9 -29,-0.6 1,-0.2 -30,-0.5 0.978 60.5 119.4 72.7 58.5 -1.9 -2.9 -13.6 53 110 A F E < - C 0 48A 75 -5,-2.4 -5,-3.1 -32,-0.1 2,-0.4 -0.978 45.0-152.7-149.7 159.7 -2.3 -1.7 -10.0 54 111 A G E -AC 20 47A 0 -34,-2.1 -34,-2.2 -2,-0.3 2,-0.5 -0.976 4.0-157.1-142.8 127.1 -2.0 -3.0 -6.5 55 112 A F E -AC 19 46A 79 -9,-2.5 -9,-2.1 -2,-0.4 2,-0.4 -0.889 13.1-173.9-106.1 126.7 -3.6 -1.8 -3.3 56 113 A I E -AC 18 45A 0 -38,-2.5 -38,-2.7 -2,-0.5 2,-0.5 -0.959 7.4-168.6-122.3 137.4 -2.0 -2.6 0.1 57 114 A R E -AC 17 44A 40 -13,-2.2 -13,-1.5 -2,-0.4 -14,-1.5 -0.946 8.8-162.6-128.9 111.9 -3.5 -1.9 3.5 58 115 A L - 0 0 2 -42,-1.5 -42,-0.2 -2,-0.5 -16,-0.1 -0.315 23.1-122.6 -84.8 171.5 -1.3 -2.3 6.6 59 116 A E S S+ 0 0 134 -18,-0.2 -43,-0.1 -2,-0.1 -1,-0.1 0.981 89.6 31.0 -77.4 -67.0 -2.4 -2.7 10.2 60 117 A T S S- 0 0 69 1,-0.1 4,-0.5 -44,-0.0 -2,-0.1 -0.150 74.0-129.0 -83.4-177.5 -0.8 0.3 12.0 61 118 A R S > S+ 0 0 124 2,-0.1 4,-2.2 3,-0.1 5,-0.2 0.799 99.0 65.9-101.2 -42.1 0.1 3.7 10.6 62 119 A T H > S+ 0 0 91 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.862 103.6 50.9 -48.6 -40.1 3.8 4.0 11.6 63 120 A L H > S+ 0 0 50 1,-0.2 4,-3.2 2,-0.2 5,-0.4 0.953 106.1 52.3 -64.4 -51.6 4.5 1.1 9.2 64 121 A A H > S+ 0 0 0 -4,-0.5 4,-2.0 1,-0.2 -1,-0.2 0.855 111.4 49.9 -53.0 -37.5 2.7 2.7 6.2 65 122 A E H X S+ 0 0 88 -4,-2.2 4,-2.1 2,-0.2 5,-0.3 0.976 112.6 43.0 -66.6 -57.4 4.7 5.8 6.8 66 123 A I H X S+ 0 0 83 -4,-2.3 4,-2.3 1,-0.2 -2,-0.2 0.895 122.3 41.0 -55.9 -42.7 8.2 4.1 6.9 67 124 A A H X>S+ 0 0 0 -4,-3.2 4,-2.1 2,-0.2 5,-0.7 0.802 107.9 62.9 -75.8 -30.3 7.2 1.9 4.0 68 125 A K H X5S+ 0 0 43 -4,-2.0 4,-0.8 -5,-0.4 -2,-0.2 0.908 116.0 29.6 -60.8 -43.7 5.5 4.8 2.2 69 126 A V H <5S+ 0 0 99 -4,-2.1 -2,-0.2 2,-0.2 -1,-0.2 0.885 121.8 51.5 -83.2 -43.3 8.8 6.7 1.9 70 127 A E H <5S+ 0 0 104 -4,-2.3 -3,-0.2 -5,-0.3 -2,-0.2 0.979 120.2 32.7 -57.3 -61.6 11.1 3.7 1.8 71 128 A L H ><5S+ 0 0 9 -4,-2.1 3,-0.7 -5,-0.2 -1,-0.2 0.899 95.0 106.8 -63.4 -41.7 9.3 1.9 -1.0 72 129 A D T 3< -D 79 0B 17 3,-3.2 3,-2.9 -2,-0.2 -2,-0.0 -0.893 69.6 -36.0-136.3 105.3 11.4 -3.3 -9.1 77 134 A R T 3 S- 0 0 184 -2,-0.4 3,-0.1 1,-0.3 -1,-0.0 0.766 123.1 -50.8 54.5 25.3 12.8 -5.8 -11.7 78 135 A G T 3 S+ 0 0 77 1,-0.4 -1,-0.3 -54,-0.0 2,-0.1 0.141 121.4 107.5 99.9 -19.6 13.9 -2.7 -13.6 79 136 A K B < S-D 76 0B 117 -3,-2.9 -3,-3.2 1,-0.1 -1,-0.4 -0.482 70.7-110.4 -89.7 162.5 10.5 -1.0 -13.4 80 137 A Q - 0 0 124 -5,-0.2 2,-0.5 -2,-0.1 -1,-0.1 -0.549 20.5-145.1 -91.4 157.7 9.5 2.0 -11.2 81 138 A L - 0 0 11 -7,-0.2 -8,-1.8 -2,-0.2 -7,-0.7 -0.961 6.2-160.8-128.8 115.6 7.3 1.9 -8.2 82 139 A R E -B 21 0A 106 -61,-1.9 -61,-2.5 -2,-0.5 2,-0.6 -0.846 8.6-173.1 -98.8 116.4 4.9 4.8 -7.3 83 140 A V E +B 20 0A 4 -2,-0.7 2,-0.4 -63,-0.2 -63,-0.2 -0.925 14.8 157.8-113.6 112.7 3.7 4.8 -3.7 84 141 A R E -B 19 0A 117 -65,-1.9 -65,-1.8 -2,-0.6 2,-0.2 -0.998 49.7 -98.4-137.0 136.3 1.1 7.4 -2.8 85 142 A F E -B 18 0A 51 -2,-0.4 -67,-0.2 -67,-0.2 5,-0.1 -0.301 30.0-160.9 -53.4 115.9 -1.4 7.4 0.1 86 143 A A S S+ 0 0 39 -69,-1.9 -1,-0.2 -2,-0.2 -68,-0.1 0.936 91.2 32.8 -65.9 -48.1 -4.7 6.2 -1.4 87 144 A C S S+ 0 0 45 -70,-0.9 2,-0.6 -72,-0.3 -1,-0.1 0.933 117.1 58.9 -74.3 -48.5 -6.8 7.7 1.4 88 145 A H - 0 0 60 -73,-0.3 2,-0.6 -71,-0.3 -1,-0.1 -0.755 63.8-179.0 -88.5 117.4 -4.6 10.7 2.1 89 146 A S - 0 0 85 -2,-0.6 3,-0.1 -5,-0.1 -3,-0.1 -0.768 69.7 -61.4-119.2 85.2 -4.2 12.9 -1.0 90 147 A A S S+ 0 0 97 -2,-0.6 2,-1.0 1,-0.2 -2,-0.0 0.848 87.3 153.3 43.5 40.9 -1.9 15.8 -0.2 91 148 A S + 0 0 82 2,-0.1 2,-0.6 1,-0.0 -1,-0.2 -0.699 4.0 149.2-102.4 81.0 -4.5 16.9 2.4 92 149 A L - 0 0 148 -2,-1.0 2,-1.3 -3,-0.1 -4,-0.0 -0.858 21.7-175.8-117.8 96.6 -2.5 18.8 5.0 93 150 A T + 0 0 148 -2,-0.6 2,-0.3 2,-0.0 -2,-0.1 -0.682 50.9 76.2 -93.5 84.5 -4.6 21.5 6.7 94 151 A S - 0 0 113 -2,-1.3 -2,-0.1 2,-0.0 0, 0.0 -0.970 60.8-138.7-170.9 177.9 -2.0 23.2 9.0 95 152 A G - 0 0 67 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.420 17.5-169.5-156.5 73.0 0.9 25.5 9.1 96 153 A P - 0 0 117 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 -0.523 18.2-141.6 -69.8 118.5 3.8 24.5 11.4 97 154 A S + 0 0 126 -2,-0.4 2,-0.3 2,-0.0 -2,-0.0 -0.626 36.9 141.3 -84.1 137.9 6.3 27.3 11.9 98 155 A S 0 0 126 -2,-0.3 0, 0.0 1,-0.1 0, 0.0 -0.971 360.0 360.0-163.4 171.7 10.0 26.5 12.0 99 156 A G 0 0 124 -2,-0.3 -1,-0.1 0, 0.0 -2,-0.0 0.185 360.0 360.0 155.1 360.0 13.4 27.6 11.0