==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 19-MAY-05 2CPM . COMPND 2 MOLECULE: SPERM-ASSOCIATED ANTIGEN 7; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.NAGATA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, . 94 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7530.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 57.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 10.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 34.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 37 A G 0 0 139 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 90.6 19.2 19.8 15.9 2 38 A S - 0 0 125 2,-0.1 2,-0.7 0, 0.0 0, 0.0 -0.811 360.0-103.9-127.6 168.3 22.0 17.3 16.0 3 39 A S S S+ 0 0 126 -2,-0.3 2,-0.0 1,-0.0 0, 0.0 -0.837 82.7 66.7 -98.2 112.2 24.0 15.2 13.5 4 40 A G + 0 0 74 -2,-0.7 2,-0.3 1,-0.0 -2,-0.1 0.126 46.0 160.6 140.3 101.8 23.0 11.6 13.4 5 41 A S + 0 0 96 3,-0.0 2,-0.3 -2,-0.0 3,-0.1 -0.995 5.3 159.1-145.9 136.1 19.7 10.0 12.3 6 42 A S + 0 0 100 -2,-0.3 -2,-0.0 1,-0.2 0, 0.0 -0.934 55.6 24.5-148.2 169.2 18.7 6.5 11.2 7 43 A G S S+ 0 0 82 -2,-0.3 2,-0.2 1,-0.1 -1,-0.2 0.883 83.2 149.9 35.1 66.7 15.7 4.2 10.9 8 44 A Q > - 0 0 93 -3,-0.1 4,-0.5 1,-0.1 -1,-0.1 -0.647 55.7-126.9-119.0 176.6 13.3 7.1 10.5 9 45 A K H > S+ 0 0 110 -2,-0.2 4,-3.0 2,-0.1 5,-0.2 0.855 98.0 69.0 -90.8 -42.9 10.0 7.7 8.7 10 46 A V H > S+ 0 0 92 1,-0.3 4,-2.0 2,-0.2 5,-0.2 0.913 103.1 43.9 -39.1 -65.8 10.9 10.8 6.8 11 47 A E H > S+ 0 0 104 1,-0.2 4,-2.1 2,-0.2 -1,-0.3 0.899 113.2 53.5 -48.9 -46.4 13.3 9.0 4.5 12 48 A F H X S+ 0 0 14 -4,-0.5 4,-2.1 1,-0.2 -1,-0.2 0.935 106.0 52.6 -55.5 -50.2 10.7 6.2 4.1 13 49 A R H X S+ 0 0 126 -4,-3.0 4,-2.4 1,-0.2 3,-0.4 0.950 107.3 51.1 -51.1 -57.4 8.0 8.6 3.1 14 50 A K H X S+ 0 0 126 -4,-2.0 4,-2.0 1,-0.3 -1,-0.2 0.915 108.8 51.7 -47.0 -51.5 10.1 10.1 0.3 15 51 A R H X S+ 0 0 157 -4,-2.1 4,-2.3 1,-0.2 -1,-0.3 0.888 109.4 50.7 -54.4 -42.0 10.9 6.7 -1.1 16 52 A M H X S+ 0 0 6 -4,-2.1 4,-3.3 -3,-0.4 5,-0.3 0.906 105.3 56.2 -63.6 -42.8 7.2 5.9 -1.1 17 53 A E H X S+ 0 0 96 -4,-2.4 4,-2.0 1,-0.2 5,-0.2 0.916 110.6 44.3 -55.7 -46.3 6.4 9.1 -3.0 18 54 A K H X S+ 0 0 145 -4,-2.0 4,-2.4 -5,-0.2 -1,-0.2 0.925 116.5 46.4 -65.3 -46.1 8.8 8.2 -5.8 19 55 A E H X S+ 0 0 74 -4,-2.3 4,-2.3 -5,-0.2 5,-0.2 0.977 113.2 47.6 -60.5 -58.9 7.5 4.6 -5.9 20 56 A V H X S+ 0 0 1 -4,-3.3 4,-2.4 1,-0.2 3,-0.5 0.945 113.9 46.7 -46.8 -61.8 3.8 5.4 -5.9 21 57 A S H X S+ 0 0 57 -4,-2.0 4,-2.3 -5,-0.3 5,-0.3 0.926 109.6 54.2 -47.5 -54.1 4.2 8.1 -8.6 22 58 A D H X S+ 0 0 60 -4,-2.4 4,-1.9 1,-0.3 -1,-0.3 0.880 110.0 48.1 -48.9 -43.0 6.3 5.8 -10.8 23 59 A F H < S+ 0 0 1 -4,-2.3 -1,-0.3 -3,-0.5 -2,-0.2 0.889 108.1 55.3 -66.7 -40.2 3.5 3.2 -10.5 24 60 A I H < S+ 0 0 55 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.957 109.9 44.0 -57.4 -54.8 0.8 5.7 -11.4 25 61 A Q H < S+ 0 0 148 -4,-2.3 2,-0.4 -5,-0.1 -1,-0.2 0.898 96.0 89.6 -58.0 -42.6 2.5 6.8 -14.6 26 62 A D < - 0 0 67 -4,-1.9 0, 0.0 -5,-0.3 0, 0.0 -0.425 57.9-172.3 -61.6 114.6 3.2 3.2 -15.5 27 63 A S S S+ 0 0 95 -2,-0.4 -1,-0.2 1,-0.2 -2,-0.0 0.934 79.9 60.4 -74.8 -48.8 0.1 1.9 -17.4 28 64 A G S S+ 0 0 67 2,-0.1 2,-0.6 1,-0.0 -1,-0.2 0.860 93.1 77.0 -46.5 -41.6 1.1 -1.7 -17.6 29 65 A Q + 0 0 79 -6,-0.2 3,-0.1 1,-0.2 -1,-0.0 -0.636 51.5 169.3 -77.9 117.5 1.1 -1.8 -13.8 30 66 A I + 0 0 55 -2,-0.6 42,-1.3 1,-0.2 2,-0.3 0.636 67.8 4.8 -99.8 -20.1 -2.5 -2.0 -12.5 31 67 A K E -A 71 0A 107 40,-0.2 2,-0.3 45,-0.0 -1,-0.2 -0.964 60.6-144.4-156.0 168.9 -1.6 -2.7 -8.9 32 68 A K E -A 70 0A 53 38,-2.1 38,-2.0 -2,-0.3 2,-0.7 -0.988 7.1-148.5-146.1 133.2 1.3 -3.1 -6.5 33 69 A K E -A 69 0A 133 -2,-0.3 36,-0.2 36,-0.2 2,-0.1 -0.868 20.0-162.3-105.6 105.1 1.9 -5.4 -3.5 34 70 A F - 0 0 20 34,-1.7 34,-0.3 -2,-0.7 -2,-0.0 -0.474 15.4-123.3 -83.6 156.0 4.1 -3.8 -0.9 35 71 A Q - 0 0 144 32,-0.1 2,-1.5 -2,-0.1 3,-0.2 -0.825 23.1-112.7-103.9 138.5 5.8 -5.7 1.9 36 72 A P + 0 0 61 0, 0.0 31,-0.1 0, 0.0 30,-0.1 -0.495 51.3 154.0 -69.8 89.0 5.3 -5.1 5.6 37 73 A M + 0 0 102 -2,-1.5 2,-0.2 1,-0.1 30,-0.0 0.874 65.9 12.9 -84.0 -42.0 8.8 -3.7 6.6 38 74 A N - 0 0 92 -3,-0.2 4,-0.2 1,-0.1 -1,-0.1 -0.731 68.8-121.6-127.8 177.1 7.6 -1.7 9.6 39 75 A K S S+ 0 0 192 -2,-0.2 4,-0.4 2,-0.1 3,-0.1 0.835 113.4 30.7 -88.4 -38.1 4.6 -1.3 11.8 40 76 A I S >> S+ 0 0 92 1,-0.2 4,-2.0 2,-0.2 3,-0.9 0.820 99.9 80.1 -88.5 -36.2 4.0 2.4 11.1 41 77 A E H 3> S+ 0 0 30 1,-0.3 4,-2.6 2,-0.2 5,-0.2 0.777 87.6 64.9 -40.9 -30.0 5.4 2.5 7.6 42 78 A R H 3> S+ 0 0 103 -4,-0.2 4,-2.4 2,-0.2 -1,-0.3 0.974 104.3 39.8 -59.9 -58.3 1.9 1.1 6.7 43 79 A S H <> S+ 0 0 70 -3,-0.9 4,-2.0 -4,-0.4 -2,-0.2 0.898 114.3 56.1 -59.0 -42.5 -0.0 4.1 7.7 44 80 A I H X S+ 0 0 25 -4,-2.0 4,-2.0 1,-0.2 3,-0.2 0.955 109.5 43.9 -54.8 -55.7 2.6 6.4 6.3 45 81 A L H X S+ 0 0 2 -4,-2.6 4,-2.3 1,-0.2 -1,-0.2 0.926 108.1 59.4 -56.4 -47.9 2.4 4.8 2.8 46 82 A H H X S+ 0 0 28 -4,-2.4 4,-2.4 1,-0.2 5,-0.2 0.898 107.0 47.5 -47.7 -47.4 -1.4 4.8 2.9 47 83 A D H X S+ 0 0 76 -4,-2.0 4,-1.9 1,-0.2 -1,-0.2 0.951 108.5 52.9 -60.7 -51.9 -1.3 8.6 3.3 48 84 A V H X S+ 0 0 13 -4,-2.0 4,-1.5 2,-0.2 -1,-0.2 0.841 112.9 47.8 -53.1 -35.3 1.2 9.2 0.5 49 85 A V H >X>S+ 0 0 0 -4,-2.3 4,-2.3 2,-0.2 5,-1.0 0.995 106.0 51.3 -69.7 -67.0 -1.2 7.1 -1.7 50 86 A E H 3<5S+ 0 0 132 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.796 115.0 48.7 -40.7 -33.2 -4.5 8.7 -0.9 51 87 A V H 3<5S+ 0 0 103 -4,-1.9 -1,-0.3 -5,-0.2 -2,-0.2 0.871 106.4 54.1 -77.0 -39.1 -2.7 12.0 -1.7 52 88 A A H <<5S- 0 0 48 -4,-1.5 -2,-0.2 -3,-1.0 -1,-0.2 0.839 121.6-104.8 -64.1 -33.7 -1.2 10.7 -5.0 53 89 A G T <5S+ 0 0 52 -4,-2.3 2,-0.3 1,-0.3 -3,-0.2 0.701 79.2 114.5 112.3 32.3 -4.7 9.7 -6.2 54 90 A L < - 0 0 22 -5,-1.0 2,-0.5 18,-0.1 -1,-0.3 -0.798 68.3 -97.7-127.0 169.5 -4.7 5.9 -5.9 55 91 A T E -B 71 0A 36 16,-2.2 16,-2.6 -2,-0.3 2,-0.3 -0.781 38.3-168.1 -93.0 125.8 -6.5 3.3 -3.8 56 92 A S E +B 70 0A 23 -2,-0.5 2,-0.3 14,-0.2 14,-0.2 -0.830 14.0 154.8-113.6 151.7 -4.8 2.0 -0.7 57 93 A F E -B 69 0A 69 12,-2.2 12,-3.0 -2,-0.3 2,-0.4 -0.982 32.3-125.1-165.8 163.8 -5.6 -0.9 1.5 58 94 A S E +B 68 0A 28 -2,-0.3 2,-0.4 10,-0.3 10,-0.2 -0.977 24.9 173.1-124.6 130.8 -4.1 -3.5 4.0 59 95 A F E +B 67 0A 14 8,-2.1 8,-1.2 -2,-0.4 2,-0.3 -0.985 3.5 170.2-139.9 126.6 -4.3 -7.2 3.7 60 96 A G - 0 0 33 -2,-0.4 6,-0.2 6,-0.2 3,-0.1 -0.982 32.4-145.0-137.8 149.1 -2.6 -9.9 5.8 61 97 A E S S+ 0 0 184 -2,-0.3 2,-0.4 1,-0.2 -1,-0.1 0.925 91.1 32.4 -75.0 -47.3 -2.9 -13.7 6.3 62 98 A D S S- 0 0 94 3,-0.5 3,-0.3 1,-0.1 -1,-0.2 -0.888 83.4-119.2-114.8 144.4 -2.1 -13.7 10.0 63 99 A D S S+ 0 0 129 -2,-0.4 -1,-0.1 1,-0.3 -2,-0.0 0.852 119.6 47.8 -44.6 -40.6 -3.0 -11.0 12.6 64 100 A D S S+ 0 0 142 1,-0.1 2,-0.7 -3,-0.0 -1,-0.3 0.901 108.0 60.4 -69.4 -42.2 0.7 -10.6 13.2 65 101 A C + 0 0 80 -3,-0.3 -3,-0.5 2,-0.0 2,-0.4 -0.801 64.6 162.3 -93.3 115.9 1.5 -10.4 9.5 66 102 A R - 0 0 171 -2,-0.7 -6,-0.2 -6,-0.2 2,-0.2 -0.924 12.0-174.4-138.6 111.2 -0.2 -7.5 7.7 67 103 A Y E - B 0 59A 57 -8,-1.2 -8,-2.1 -2,-0.4 2,-0.4 -0.569 20.3-124.2-100.3 165.6 1.0 -6.2 4.4 68 104 A V E - B 0 58A 7 -34,-0.3 -34,-1.7 -10,-0.2 2,-0.3 -0.922 24.8-173.1-114.5 135.6 -0.2 -3.1 2.4 69 105 A M E -AB 33 57A 28 -12,-3.0 -12,-2.2 -2,-0.4 2,-0.3 -0.834 6.1-157.3-123.4 162.0 -1.5 -3.1 -1.1 70 106 A I E -AB 32 56A 0 -38,-2.0 -38,-2.1 -2,-0.3 2,-0.3 -0.997 6.0-170.7-141.6 145.0 -2.5 -0.5 -3.7 71 107 A F E -AB 31 55A 21 -16,-2.6 -16,-2.2 -2,-0.3 -40,-0.2 -0.853 24.1-107.3-130.7 166.1 -4.7 -0.4 -6.7 72 108 A K - 0 0 32 -42,-1.3 -18,-0.1 -2,-0.3 -42,-0.1 -0.306 33.7-105.7 -86.5 173.8 -5.5 2.0 -9.6 73 109 A K S > S+ 0 0 185 2,-0.2 3,-0.6 -20,-0.2 -1,-0.1 0.957 121.6 29.8 -64.4 -52.4 -8.6 4.1 -10.1 74 110 A E T 3 S+ 0 0 172 1,-0.2 -1,-0.2 -3,-0.0 -44,-0.0 0.866 126.1 46.0 -75.5 -38.1 -10.0 1.9 -12.9 75 111 A F T 3 S+ 0 0 89 -45,-0.1 -1,-0.2 2,-0.0 -3,-0.2 0.166 88.2 133.7 -90.0 18.0 -8.4 -1.2 -11.6 76 112 A A < - 0 0 32 -3,-0.6 -3,-0.1 -5,-0.2 -45,-0.0 -0.400 60.1-108.1 -70.8 144.8 -9.6 -0.4 -8.1 77 113 A P - 0 0 23 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.240 31.4-116.3 -69.8 159.9 -11.3 -3.1 -6.0 78 114 A S > - 0 0 61 1,-0.1 4,-2.9 0, 0.0 5,-0.2 -0.530 21.6-110.8 -95.7 164.4 -15.0 -3.2 -5.3 79 115 A D H > S+ 0 0 140 2,-0.2 4,-2.0 1,-0.2 3,-0.2 0.985 118.1 37.4 -55.3 -67.2 -16.7 -3.0 -1.9 80 116 A E H > S+ 0 0 128 1,-0.2 4,-2.0 2,-0.2 5,-0.2 0.903 118.4 51.9 -52.6 -45.4 -18.0 -6.6 -1.8 81 117 A E H > S+ 0 0 86 1,-0.2 4,-3.1 2,-0.2 -1,-0.2 0.880 105.5 56.1 -60.0 -39.4 -14.8 -7.8 -3.4 82 118 A L H X S+ 0 0 31 -4,-2.9 4,-2.0 -3,-0.2 -1,-0.2 0.932 106.5 49.0 -58.9 -48.3 -12.8 -5.9 -0.8 83 119 A D H X S+ 0 0 75 -4,-2.0 4,-2.0 1,-0.2 -1,-0.2 0.922 115.6 43.4 -58.1 -46.8 -14.5 -7.7 2.1 84 120 A S H X S+ 0 0 35 -4,-2.0 4,-2.3 1,-0.2 -1,-0.2 0.888 107.6 60.7 -66.8 -40.2 -13.9 -11.1 0.5 85 121 A Y H < S+ 0 0 116 -4,-3.1 -2,-0.2 1,-0.2 -1,-0.2 0.923 109.4 41.7 -52.7 -49.3 -10.3 -10.2 -0.4 86 122 A R H < S+ 0 0 170 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.941 113.5 51.5 -64.8 -49.1 -9.4 -9.7 3.2 87 123 A R H < S- 0 0 146 -4,-2.0 2,-0.3 1,-0.2 -1,-0.2 0.799 123.8-101.6 -58.8 -28.9 -11.4 -12.7 4.4 88 124 A G < - 0 0 28 -4,-2.3 -1,-0.2 1,-0.2 -27,-0.0 -0.932 41.2 -57.0 140.2-163.7 -9.5 -14.7 1.8 89 125 A S S S- 0 0 131 -2,-0.3 -1,-0.2 1,-0.1 -2,-0.1 0.937 114.3 -19.7 -82.0 -53.4 -10.0 -16.2 -1.7 90 126 A G > + 0 0 47 -3,-0.1 3,-0.9 4,-0.1 4,-0.2 -0.508 53.1 175.3-162.4 85.7 -13.1 -18.4 -1.1 91 127 A P G > + 0 0 62 0, 0.0 3,-1.1 0, 0.0 -1,-0.0 0.499 53.1 114.3 -69.7 -2.7 -14.0 -19.5 2.5 92 128 A S G 3 S+ 0 0 123 1,-0.3 -2,-0.0 -3,-0.0 0, 0.0 0.840 73.6 54.8 -34.7 -47.8 -17.1 -21.1 1.0 93 129 A S G < 0 0 131 -3,-0.9 -1,-0.3 1,-0.2 0, 0.0 0.929 360.0 360.0 -55.5 -48.9 -15.6 -24.4 2.1 94 130 A G < 0 0 101 -3,-1.1 -1,-0.2 -4,-0.2 -4,-0.1 -0.832 360.0 360.0 145.1 360.0 -15.3 -23.3 5.7