==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 19-MAY-05 2CPQ . COMPND 2 MOLECULE: FRAGILE X MENTAL RETARDATION SYNDROME RELATED . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.NAGATA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7056.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 59.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 16.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 11.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 19 20.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 205 A G 0 0 112 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 45.2 7.9 -1.1 13.0 2 206 A S - 0 0 126 1,-0.1 2,-0.3 2,-0.1 0, 0.0 0.006 360.0-116.2 -45.1 153.1 11.3 -0.5 14.5 3 207 A S + 0 0 119 1,-0.1 -1,-0.1 2,-0.0 0, 0.0 -0.661 61.4 117.5 -97.0 152.9 14.0 0.5 12.0 4 208 A G + 0 0 74 -2,-0.3 -1,-0.1 0, 0.0 2,-0.1 0.365 30.4 163.4 154.8 47.2 17.1 -1.5 11.2 5 209 A S - 0 0 115 1,-0.1 -2,-0.0 39,-0.0 0, 0.0 -0.350 17.4-175.8 -81.2 164.5 17.3 -2.7 7.5 6 210 A S - 0 0 131 1,-0.4 2,-0.3 -2,-0.1 -1,-0.1 0.625 47.5 -87.0-126.4 -45.8 20.4 -3.9 5.8 7 211 A G - 0 0 52 0, 0.0 2,-0.5 0, 0.0 -1,-0.4 -0.990 49.0 -54.0 163.5-159.5 19.6 -4.5 2.2 8 212 A T - 0 0 84 -2,-0.3 3,-0.1 1,-0.1 5,-0.0 -0.966 24.6-157.0-120.7 125.4 18.2 -7.1 -0.3 9 213 A K S S+ 0 0 149 -2,-0.5 2,-0.4 1,-0.1 -1,-0.1 0.917 87.0 34.6 -62.3 -45.0 19.6 -10.6 -0.7 10 214 A Q S S- 0 0 125 2,-0.2 -1,-0.1 1,-0.1 4,-0.1 -0.928 77.9-132.8-116.8 138.0 18.2 -10.9 -4.3 11 215 A L S S+ 0 0 169 -2,-0.4 -1,-0.1 2,-0.1 -2,-0.0 0.943 93.7 44.0 -48.2 -58.7 17.9 -8.1 -6.8 12 216 A A S S- 0 0 71 -3,-0.1 2,-0.5 1,-0.1 -2,-0.2 -0.188 97.1 -99.8 -81.2 177.7 14.3 -9.0 -7.7 13 217 A A - 0 0 19 1,-0.1 50,-0.2 -5,-0.0 49,-0.1 -0.900 14.7-152.3-106.8 122.9 11.5 -9.9 -5.3 14 218 A A S S+ 0 0 70 -2,-0.5 2,-0.4 49,-0.1 49,-0.2 0.861 88.0 44.1 -57.2 -37.3 10.7 -13.6 -4.8 15 219 A F E -A 62 0A 101 47,-2.1 47,-2.4 -3,-0.1 2,-0.4 -0.908 69.4-178.2-114.6 139.6 7.1 -12.6 -3.9 16 220 A H E -A 61 0A 124 -2,-0.4 2,-0.5 45,-0.2 45,-0.2 -1.000 13.0-152.5-139.0 137.3 5.0 -10.1 -5.8 17 221 A E E +A 60 0A 41 43,-1.9 43,-2.9 -2,-0.4 2,-0.4 -0.935 15.1 175.3-113.4 127.4 1.4 -8.8 -5.2 18 222 A E E +A 59 0A 111 -2,-0.5 2,-0.3 41,-0.2 41,-0.2 -0.938 13.5 148.8-135.2 112.0 -0.8 -7.5 -8.1 19 223 A F E -A 58 0A 19 39,-1.6 39,-1.8 -2,-0.4 2,-0.5 -0.954 40.2-119.4-139.9 158.2 -4.4 -6.5 -7.5 20 224 A V E -A 57 0A 91 -2,-0.3 2,-0.4 37,-0.3 37,-0.2 -0.866 24.3-160.5-103.5 128.5 -6.9 -4.0 -9.0 21 225 A V - 0 0 3 35,-2.6 5,-0.1 -2,-0.5 55,-0.0 -0.883 29.8-101.6-110.2 138.5 -8.4 -1.3 -6.8 22 226 A R >> - 0 0 157 -2,-0.4 4,-2.9 1,-0.2 3,-1.2 -0.313 24.3-132.2 -56.8 128.5 -11.6 0.6 -7.5 23 227 A E H 3> S+ 0 0 179 1,-0.3 4,-0.6 2,-0.2 -1,-0.2 0.700 110.3 55.1 -55.6 -18.1 -10.7 4.1 -8.9 24 228 A D H 34 S+ 0 0 122 2,-0.1 4,-0.4 1,-0.1 -1,-0.3 0.795 113.4 37.6 -85.0 -31.8 -13.3 5.3 -6.4 25 229 A L H <> S+ 0 0 16 -3,-1.2 4,-3.1 2,-0.1 53,-0.4 0.701 98.2 81.5 -90.8 -23.3 -11.6 3.6 -3.4 26 230 A M H X S+ 0 0 23 -4,-2.9 4,-2.9 1,-0.2 5,-0.4 0.930 86.1 57.7 -46.0 -57.1 -8.1 4.3 -4.6 27 231 A G H X S+ 0 0 48 -4,-0.6 4,-2.3 1,-0.2 3,-0.3 0.905 113.9 36.5 -39.8 -61.8 -8.3 7.9 -3.2 28 232 A L H 4 S+ 0 0 65 -4,-0.4 -1,-0.2 1,-0.2 -2,-0.2 0.909 112.6 60.1 -60.9 -43.7 -9.0 6.7 0.3 29 233 A A H < S+ 0 0 0 -4,-3.1 -1,-0.2 1,-0.2 -2,-0.2 0.873 112.2 39.6 -52.0 -40.6 -6.7 3.7 -0.1 30 234 A I H <>S- 0 0 37 -4,-2.9 6,-2.3 -3,-0.3 7,-0.6 0.849 100.7-162.0 -78.6 -36.4 -3.8 6.1 -0.8 31 235 A G T ><5 - 0 0 32 -4,-2.3 3,-0.5 -5,-0.4 2,-0.3 -0.557 40.1 -16.8 89.9-155.2 -4.9 8.6 1.8 32 236 A T T 3 5S- 0 0 112 1,-0.2 3,-0.2 -2,-0.2 4,-0.0 -0.683 127.2 -12.3 -91.9 142.9 -3.7 12.2 2.1 33 237 A H T 3 5S- 0 0 186 -2,-0.3 -1,-0.2 1,-0.2 -2,-0.1 0.844 132.4 -52.6 35.2 48.3 -0.7 13.5 0.2 34 238 A G T <>5S+ 0 0 18 -3,-0.5 4,-0.9 3,-0.1 -1,-0.2 0.967 92.3 152.9 55.7 59.2 0.2 9.9 -0.5 35 239 A S H >< + 0 0 54 -5,-0.6 4,-2.2 -3,-0.2 -4,-0.2 0.967 67.1 42.9 -80.8 -63.5 0.0 8.7 3.1 36 240 A N H > S+ 0 0 30 -6,-2.3 4,-2.8 1,-0.2 3,-0.4 0.944 115.8 49.5 -46.8 -61.0 -0.9 5.0 2.8 37 241 A I H > S+ 0 0 39 -7,-0.6 4,-2.3 1,-0.3 5,-0.3 0.932 108.1 52.5 -44.1 -61.5 1.6 4.4 -0.0 38 242 A Q H X S+ 0 0 93 -4,-0.9 4,-0.8 1,-0.2 -1,-0.3 0.870 112.3 47.6 -43.8 -44.6 4.4 6.1 1.8 39 243 A Q H >< S+ 0 0 74 -4,-2.2 3,-1.7 -3,-0.4 -1,-0.2 0.956 106.6 54.7 -63.9 -52.4 3.7 3.8 4.8 40 244 A A H >< S+ 0 0 0 -4,-2.8 3,-1.2 1,-0.3 -1,-0.2 0.855 108.0 51.3 -49.6 -38.8 3.5 0.7 2.7 41 245 A R H 3< S+ 0 0 171 -4,-2.3 -1,-0.3 1,-0.3 -2,-0.2 0.727 98.7 65.9 -72.2 -22.0 7.0 1.5 1.3 42 246 A K T << S+ 0 0 158 -3,-1.7 -1,-0.3 -4,-0.8 -2,-0.2 0.346 82.7 106.5 -81.2 7.4 8.2 1.9 4.9 43 247 A V S X S- 0 0 13 -3,-1.2 3,-1.0 -4,-0.2 24,-0.1 -0.704 74.5-116.2 -91.9 138.9 7.5 -1.8 5.4 44 248 A P T 3 S+ 0 0 91 0, 0.0 27,-0.1 0, 0.0 26,-0.1 -0.297 95.6 31.0 -69.7 154.2 10.4 -4.3 5.6 45 249 A G T 3 S+ 0 0 35 1,-0.2 18,-2.2 22,-0.1 2,-0.8 0.300 88.4 122.2 81.4 -11.7 10.9 -7.0 3.0 46 250 A V E < -B 62 0A 23 -3,-1.0 16,-0.3 16,-0.3 -1,-0.2 -0.768 39.8-176.0 -90.0 109.8 9.4 -4.7 0.4 47 251 A T E - 0 0 49 14,-1.5 2,-0.3 -2,-0.8 15,-0.2 0.951 65.7 -25.6 -67.9 -51.0 11.8 -4.1 -2.5 48 252 A A E -B 61 0A 45 13,-1.4 13,-2.7 2,-0.0 2,-0.3 -0.958 51.1-137.6-156.6 171.0 9.6 -1.6 -4.3 49 253 A I E +B 60 0A 28 -2,-0.3 2,-0.3 11,-0.2 11,-0.2 -0.899 20.8 179.6-143.9 110.8 6.0 -0.5 -4.9 50 254 A E E -B 59 0A 118 9,-3.0 9,-2.9 -2,-0.3 2,-0.4 -0.810 10.1-156.4-111.2 152.0 4.6 0.5 -8.3 51 255 A L E -B 58 0A 46 -2,-0.3 2,-0.7 7,-0.2 7,-0.2 -0.991 7.1-147.9-131.0 135.0 1.1 1.6 -9.2 52 256 A D E >> +B 57 0A 45 5,-2.0 4,-1.9 -2,-0.4 5,-1.3 -0.884 16.3 175.4-105.3 110.4 -0.7 1.4 -12.5 53 257 A E T 45S+ 0 0 170 -2,-0.7 -1,-0.2 3,-0.2 5,-0.1 0.853 73.2 74.2 -78.8 -37.1 -3.2 4.3 -13.1 54 258 A D T 45S+ 0 0 157 1,-0.2 -1,-0.2 3,-0.1 -2,-0.0 0.849 128.7 0.7 -43.1 -41.0 -4.1 3.2 -16.6 55 259 A T T 45S- 0 0 101 -3,-0.2 -1,-0.2 2,-0.1 -2,-0.2 0.556 103.2-113.7-122.8 -22.7 -6.1 0.4 -15.0 56 260 A G T <5 + 0 0 3 -4,-1.9 -35,-2.6 1,-0.2 2,-0.6 0.893 57.8 153.8 87.0 45.4 -5.6 1.1 -11.3 57 261 A T E < -AB 20 52A 10 -5,-1.3 -5,-2.0 -37,-0.2 2,-0.5 -0.932 36.6-142.3-112.7 119.1 -3.6 -2.0 -10.3 58 262 A F E -AB 19 51A 0 -39,-1.8 -39,-1.6 -2,-0.6 2,-0.6 -0.675 15.0-163.8 -81.8 120.9 -1.2 -1.8 -7.3 59 263 A R E -AB 18 50A 109 -9,-2.9 -9,-3.0 -2,-0.5 2,-0.3 -0.911 7.3-173.1-110.5 111.8 2.0 -3.8 -7.9 60 264 A I E -AB 17 49A 1 -43,-2.9 -43,-1.9 -2,-0.6 2,-0.5 -0.805 8.2-157.4-105.2 145.1 4.0 -4.6 -4.8 61 265 A Y E +AB 16 48A 81 -13,-2.7 -14,-1.5 -2,-0.3 -13,-1.4 -0.973 22.2 156.2-125.7 120.3 7.5 -6.2 -4.7 62 266 A G E -AB 15 46A 0 -47,-2.4 -47,-2.1 -2,-0.5 -16,-0.3 -1.000 47.6-130.4-145.3 144.1 8.8 -8.0 -1.7 63 267 A E S S+ 0 0 28 -18,-2.2 2,-0.4 -2,-0.3 -49,-0.1 0.810 102.5 31.4 -59.1 -30.2 11.4 -10.7 -1.0 64 268 A S S >> S- 0 0 59 -19,-0.5 3,-2.0 -50,-0.1 4,-1.3 -0.995 77.8-129.9-134.4 136.4 8.8 -12.5 1.0 65 269 A A H 3> S+ 0 0 15 -2,-0.4 4,-2.3 1,-0.3 5,-0.2 0.822 108.5 67.5 -49.3 -33.9 5.0 -12.6 0.6 66 270 A D H 3> S+ 0 0 129 2,-0.2 4,-1.9 3,-0.2 -1,-0.3 0.866 104.0 43.8 -55.8 -38.2 4.9 -11.7 4.3 67 271 A A H <> S+ 0 0 5 -3,-2.0 4,-2.4 2,-0.2 5,-0.3 0.994 114.4 43.8 -70.8 -67.5 6.3 -8.3 3.5 68 272 A V H X S+ 0 0 0 -4,-1.3 4,-2.2 -23,-0.3 -2,-0.2 0.796 115.0 55.5 -48.5 -30.3 4.3 -7.4 0.4 69 273 A K H X S+ 0 0 125 -4,-2.3 4,-1.7 -5,-0.3 -1,-0.2 0.958 106.0 46.7 -69.0 -52.7 1.3 -8.7 2.3 70 274 A K H < S+ 0 0 122 -4,-1.9 4,-0.3 -3,-0.2 -2,-0.2 0.881 118.5 43.4 -57.1 -40.0 1.7 -6.4 5.3 71 275 A A H >X S+ 0 0 0 -4,-2.4 3,-1.8 1,-0.2 4,-1.1 0.861 103.7 65.2 -74.1 -37.2 2.2 -3.4 3.0 72 276 A R H >X S+ 0 0 81 -4,-2.2 4,-2.8 -5,-0.3 3,-0.6 0.885 90.3 65.9 -52.5 -42.1 -0.6 -4.5 0.7 73 277 A G H 3< S+ 0 0 48 -4,-1.7 -1,-0.3 1,-0.3 -2,-0.2 0.802 100.0 52.1 -51.2 -30.9 -3.1 -3.9 3.6 74 278 A F H <4 S+ 0 0 70 -3,-1.8 -1,-0.3 -4,-0.3 -2,-0.2 0.874 113.5 41.3 -74.2 -38.9 -2.1 -0.2 3.4 75 279 A L H << S+ 0 0 0 -4,-1.1 -2,-0.2 -3,-0.6 -1,-0.2 0.731 92.7 111.6 -79.8 -23.5 -2.8 0.0 -0.4 76 280 A E S < S- 0 0 56 -4,-2.8 -55,-0.1 -5,-0.2 2,-0.0 -0.092 81.0 -95.0 -50.0 148.8 -6.0 -2.1 -0.0 77 281 A F - 0 0 68 1,-0.0 2,-0.4 -47,-0.0 -1,-0.1 -0.333 38.1-151.1 -68.2 149.5 -9.2 -0.3 -0.6 78 282 A V - 0 0 53 -53,-0.4 -50,-0.1 -3,-0.1 -49,-0.1 -0.986 16.4-115.1-128.5 134.5 -11.1 1.1 2.3 79 283 A E - 0 0 139 -2,-0.4 2,-0.3 1,-0.2 -54,-0.0 -0.280 50.8 -81.6 -63.6 148.6 -14.9 1.7 2.7 80 284 A D - 0 0 117 1,-0.0 2,-0.4 2,-0.0 -1,-0.2 -0.333 56.9-168.4 -55.0 111.6 -16.1 5.3 3.1 81 285 A F - 0 0 123 -2,-0.3 2,-0.5 -3,-0.1 -1,-0.0 -0.859 14.2-159.0-109.4 141.8 -15.5 6.1 6.7 82 286 A I + 0 0 154 -2,-0.4 2,-0.6 2,-0.0 -2,-0.0 -0.879 14.8 173.5-123.4 99.5 -16.9 9.2 8.5 83 287 A Q - 0 0 175 -2,-0.5 -2,-0.0 2,-0.0 0, 0.0 -0.911 15.9-155.6-110.1 112.3 -15.1 10.1 11.7 84 288 A V - 0 0 104 -2,-0.6 -2,-0.0 1,-0.1 0, 0.0 -0.611 20.4-132.1 -87.1 144.3 -16.1 13.4 13.3 85 289 A P - 0 0 97 0, 0.0 -1,-0.1 0, 0.0 4,-0.1 0.540 30.5-143.4 -69.8 -6.0 -13.8 15.4 15.6 86 290 A S S S+ 0 0 111 2,-0.1 -2,-0.0 1,-0.0 -3,-0.0 0.887 84.3 31.6 40.7 51.6 -16.7 15.6 18.1 87 291 A G S S- 0 0 47 2,-0.0 2,-1.1 0, 0.0 -1,-0.0 0.431 78.7-142.8 133.0 81.0 -15.5 19.1 19.0 88 292 A P - 0 0 119 0, 0.0 2,-0.5 0, 0.0 -2,-0.1 -0.524 20.4-151.4 -69.8 97.8 -13.8 21.4 16.4 89 293 A S - 0 0 123 -2,-1.1 -2,-0.0 1,-0.2 0, 0.0 -0.605 15.1-174.9 -75.7 118.2 -11.2 23.2 18.5 90 294 A S 0 0 129 -2,-0.5 -1,-0.2 1,-0.3 0, 0.0 0.915 360.0 360.0 -78.4 -46.3 -10.5 26.7 17.0 91 295 A G 0 0 114 0, 0.0 -1,-0.3 0, 0.0 0, 0.0 -1.000 360.0 360.0 143.0 360.0 -7.7 27.6 19.3