==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 31-MAR-08 3CP5 . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: RHODOTHERMUS MARINUS; . AUTHOR M.STELTER,A.MELO,L.SARAIVA,M.TEIXEIRA,M.ARCHER . 116 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6814.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 60.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 56 48.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 1 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 9 A D > 0 0 148 0, 0.0 4,-2.4 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 100.1 13.3 -1.6 28.9 2 10 A P H > + 0 0 80 0, 0.0 4,-1.9 0, 0.0 5,-0.1 0.819 360.0 50.6 -66.9 -25.0 12.2 1.8 30.3 3 11 A E H > S+ 0 0 49 2,-0.2 4,-2.1 1,-0.2 5,-0.2 0.903 109.5 50.6 -76.5 -37.7 8.6 0.7 30.7 4 12 A A H > S+ 0 0 40 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.932 110.9 50.3 -57.8 -44.2 9.6 -2.4 32.6 5 13 A L H X S+ 0 0 51 -4,-2.4 4,-2.4 1,-0.2 5,-0.2 0.921 108.5 51.7 -62.2 -43.8 11.8 -0.3 34.8 6 14 A A H X S+ 0 0 0 -4,-1.9 4,-2.3 -5,-0.2 -1,-0.2 0.914 108.5 51.3 -59.5 -39.8 8.9 2.1 35.5 7 15 A A H < S+ 0 0 25 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.891 109.7 50.7 -66.4 -36.4 6.7 -0.8 36.5 8 16 A E H < S+ 0 0 149 -4,-2.0 -2,-0.2 1,-0.2 -1,-0.2 0.897 110.2 49.1 -70.5 -35.4 9.3 -2.0 38.9 9 17 A I H < S+ 0 0 20 -4,-2.4 -2,-0.2 -5,-0.1 -1,-0.2 0.919 103.9 137.4 -69.9 -41.0 9.7 1.4 40.5 10 18 A G < + 0 0 7 -4,-2.3 -2,-0.1 2,-0.3 -1,-0.1 -0.148 66.7 177.0 78.0-177.5 5.9 1.8 41.0 11 19 A P S S+ 0 0 82 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.925 98.8 48.9 -77.4 -25.3 3.5 2.5 42.4 12 20 A V + 0 0 17 50,-0.2 -2,-0.3 1,-0.1 3,-0.1 -0.532 53.3 173.9 -77.7 140.2 1.6 1.6 39.3 13 21 A K + 0 0 154 1,-0.4 2,-0.3 -2,-0.2 -1,-0.1 0.622 67.1 6.2-110.8 -31.0 2.3 -1.7 37.6 14 22 A Q - 0 0 167 48,-0.1 -1,-0.4 47,-0.1 2,-0.3 -0.980 59.3-152.3-153.0 156.5 -0.3 -1.9 34.9 15 23 A V - 0 0 44 -2,-0.3 2,-0.5 -3,-0.1 47,-0.1 -0.922 13.0-136.0-131.2 155.7 -3.0 0.3 33.4 16 24 A S - 0 0 101 -2,-0.3 2,-0.3 0, 0.0 -2,-0.0 -0.969 23.0-178.8-110.9 123.0 -6.4 -0.5 31.6 17 25 A L - 0 0 61 -2,-0.5 4,-0.1 4,-0.0 2,-0.0 -0.929 20.1-134.7-117.5 141.5 -7.1 1.5 28.4 18 26 A G - 0 0 49 -2,-0.3 4,-0.1 2,-0.3 3,-0.0 -0.262 36.7 -94.9 -85.1-171.4 -10.4 1.0 26.4 19 27 A E S S+ 0 0 177 1,-0.1 2,-0.4 2,-0.1 -1,-0.1 0.842 109.9 24.0 -71.0 -26.4 -10.4 0.7 22.5 20 28 A Q S S- 0 0 148 0, 0.0 -2,-0.3 0, 0.0 2,-0.1 -0.931 101.3 -82.1-130.3 163.5 -11.0 4.3 22.3 21 29 A I - 0 0 35 -2,-0.4 2,-0.8 1,-0.1 3,-0.1 -0.379 38.0-127.9 -58.3 136.4 -10.5 7.3 24.4 22 30 A D > - 0 0 88 1,-0.2 4,-2.6 -2,-0.1 3,-0.2 -0.771 21.8-157.2 -85.9 105.4 -13.2 7.8 27.1 23 31 A A H > S+ 0 0 71 -2,-0.8 4,-2.1 1,-0.3 -1,-0.2 0.897 88.2 51.2 -64.0 -37.3 -14.1 11.5 26.3 24 32 A A H > S+ 0 0 75 2,-0.2 4,-2.1 1,-0.2 -1,-0.3 0.905 111.1 49.4 -66.6 -35.9 -15.6 12.3 29.7 25 33 A L H > S+ 0 0 29 -3,-0.2 4,-2.5 2,-0.2 83,-0.3 0.948 110.3 51.1 -69.2 -36.8 -12.4 10.9 31.4 26 34 A A H X S+ 0 0 6 -4,-2.6 4,-2.0 2,-0.2 -2,-0.2 0.877 108.0 52.0 -66.0 -37.0 -10.2 13.0 29.0 27 35 A Q H X S+ 0 0 88 -4,-2.1 4,-1.9 2,-0.2 -1,-0.2 0.915 109.1 49.4 -65.8 -43.6 -12.3 16.1 29.9 28 36 A Q H X S+ 0 0 65 -4,-2.1 4,-2.4 1,-0.2 -2,-0.2 0.945 110.8 52.7 -57.3 -46.4 -11.7 15.5 33.6 29 37 A G H X S+ 0 0 0 -4,-2.5 4,-2.6 75,-0.3 -2,-0.2 0.860 104.4 54.6 -56.4 -38.9 -8.0 15.0 32.7 30 38 A E H X S+ 0 0 90 -4,-2.0 4,-2.2 2,-0.2 -1,-0.2 0.923 109.3 47.3 -61.2 -47.2 -7.9 18.4 30.9 31 39 A Q H X S+ 0 0 117 -4,-1.9 4,-1.9 2,-0.2 -2,-0.2 0.922 113.8 47.7 -60.3 -44.7 -9.3 20.2 34.0 32 40 A L H X S+ 0 0 22 -4,-2.4 4,-2.8 2,-0.2 5,-0.4 0.897 108.6 54.2 -70.3 -31.3 -6.8 18.4 36.2 33 41 A F H X>S+ 0 0 7 -4,-2.6 4,-2.7 1,-0.2 5,-1.9 0.922 108.2 49.9 -66.2 -43.6 -3.9 19.2 33.9 34 42 A N H <5S+ 0 0 109 -4,-2.2 -1,-0.2 3,-0.2 -2,-0.2 0.913 115.9 43.6 -56.1 -43.4 -4.8 22.8 34.1 35 43 A T H <5S+ 0 0 102 -4,-1.9 -2,-0.2 -5,-0.2 -1,-0.2 0.903 130.6 18.3 -70.1 -44.4 -4.8 22.6 37.9 36 44 A Y H <5S+ 0 0 73 -4,-2.8 -3,-0.2 -5,-0.1 -2,-0.2 0.690 131.0 28.7-103.4 -25.4 -1.7 20.5 38.5 37 45 A C T >X5S+ 0 0 19 -4,-2.7 4,-2.1 -5,-0.4 3,-2.0 0.731 93.3 77.0-121.5 -30.5 0.5 20.7 35.4 38 46 A T T 34 + 0 0 22 -10,-1.8 3,-2.0 -7,-0.2 4,-0.4 0.524 56.1 99.4-113.5 -9.9 4.0 17.0 26.6 53 61 A R T 3 S+ 0 0 37 -10,-2.5 3,-0.3 1,-0.3 63,-0.1 0.877 98.7 32.9 -53.7 -39.3 1.8 16.7 23.6 54 62 A D T >> S+ 0 0 73 -11,-0.3 3,-1.9 1,-0.2 4,-1.1 0.261 82.9 112.2-103.0 21.0 3.6 13.7 22.3 55 63 A V H X> S+ 0 0 10 -3,-2.0 4,-2.3 1,-0.3 3,-0.5 0.856 77.4 54.6 -62.8 -35.0 4.6 12.1 25.6 56 64 A T H 34 S+ 0 0 40 -4,-0.4 -1,-0.3 -3,-0.3 -2,-0.1 0.627 106.8 53.5 -72.4 -10.1 2.2 9.1 25.0 57 65 A K H <4 S+ 0 0 131 -3,-1.9 -1,-0.2 1,-0.1 -2,-0.2 0.626 118.9 32.0 -92.0 -20.7 4.0 8.5 21.7 58 66 A R H << S+ 0 0 104 -4,-1.1 2,-0.3 -3,-0.5 -2,-0.2 0.688 121.5 42.5-113.8 -11.2 7.5 8.4 23.2 59 67 A R S < S- 0 0 75 -4,-2.3 -1,-0.2 -5,-0.2 -56,-0.0 -0.934 80.2-111.9-129.4 153.2 6.8 6.9 26.6 60 68 A G > - 0 0 22 -2,-0.3 4,-2.0 1,-0.1 5,-0.1 -0.291 30.7-111.7 -78.2 161.8 4.6 4.1 28.0 61 69 A P H > S+ 0 0 41 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.829 113.9 55.9 -66.6 -31.9 1.6 4.7 30.2 62 70 A V H > S+ 0 0 9 2,-0.2 4,-2.5 1,-0.2 5,-0.2 0.929 108.4 49.5 -70.1 -43.1 3.1 3.1 33.3 63 71 A Y H > S+ 0 0 14 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.938 112.0 47.7 -53.3 -50.4 6.1 5.5 33.1 64 72 A I H X S+ 0 0 10 -4,-2.0 4,-1.7 1,-0.2 -2,-0.2 0.928 112.0 49.2 -64.1 -41.9 3.8 8.5 32.7 65 73 A M H X S+ 0 0 0 -4,-2.5 4,-2.3 1,-0.2 -1,-0.2 0.918 112.6 47.7 -59.7 -43.3 1.6 7.5 35.6 66 74 A N H X S+ 0 0 0 -4,-2.5 4,-2.5 2,-0.2 8,-0.3 0.808 105.7 56.8 -76.8 -26.2 4.5 6.9 38.0 67 75 A V H < S+ 0 0 17 -4,-2.0 -1,-0.2 -5,-0.2 -2,-0.2 0.935 114.0 42.4 -61.4 -44.3 6.2 10.3 37.0 68 76 A M H < S+ 0 0 16 -4,-1.7 27,-0.4 -5,-0.2 29,-0.3 0.909 124.7 33.6 -64.9 -44.2 2.9 11.9 38.2 69 77 A L H < S+ 0 0 28 -4,-2.3 -2,-0.2 1,-0.2 -3,-0.2 0.740 136.4 18.7 -86.2 -26.8 2.4 9.8 41.3 70 78 A N X + 0 0 45 -4,-2.5 4,-2.4 -5,-0.2 5,-0.2 -0.473 65.1 154.7-144.5 55.0 6.0 9.2 42.3 71 79 A P H > S+ 0 0 1 0, 0.0 4,-2.8 0, 0.0 5,-0.2 0.902 76.6 54.4 -61.8 -35.0 8.2 11.8 40.7 72 80 A N H > S+ 0 0 64 2,-0.2 4,-2.1 1,-0.2 5,-0.1 0.953 110.6 45.2 -65.3 -42.7 10.9 11.6 43.5 73 81 A G H > S+ 0 0 3 2,-0.2 4,-2.1 1,-0.2 5,-0.3 0.910 113.4 50.4 -67.2 -37.1 11.2 7.8 43.1 74 82 A M H X S+ 0 0 0 -4,-2.4 4,-2.5 -8,-0.3 8,-0.3 0.898 110.7 48.8 -66.6 -39.4 11.3 8.2 39.3 75 83 A I H < S+ 0 0 21 -4,-2.8 -1,-0.2 -5,-0.2 -2,-0.2 0.891 115.2 46.0 -67.5 -35.3 14.0 10.8 39.5 76 84 A Q H < S+ 0 0 135 -4,-2.1 -2,-0.2 -5,-0.2 -1,-0.2 0.834 129.9 17.8 -73.9 -33.4 16.0 8.6 41.9 77 85 A R H < S+ 0 0 130 -4,-2.1 -3,-0.2 -5,-0.1 -2,-0.2 0.562 102.7 80.1-121.9 -11.1 15.7 5.4 40.0 78 86 A H X - 0 0 1 -4,-2.5 4,-2.3 -5,-0.3 3,-0.3 -0.877 60.7-148.8-109.1 121.2 14.7 5.9 36.3 79 87 A P H > S+ 0 0 81 0, 0.0 4,-2.1 0, 0.0 5,-0.2 0.793 95.2 55.3 -59.5 -29.9 17.5 6.9 33.9 80 88 A V H > S+ 0 0 31 2,-0.2 4,-1.9 1,-0.2 5,-0.1 0.934 111.3 43.3 -70.6 -43.4 15.2 8.9 31.6 81 89 A M H > S+ 0 0 16 -3,-0.3 4,-2.2 -7,-0.3 -1,-0.2 0.878 111.5 55.2 -66.4 -37.9 13.9 11.1 34.5 82 90 A K H X S+ 0 0 144 -4,-2.3 4,-1.8 -8,-0.3 -2,-0.2 0.950 108.2 48.5 -62.5 -43.5 17.4 11.5 35.8 83 91 A Q H X S+ 0 0 89 -4,-2.1 4,-2.2 1,-0.2 -1,-0.2 0.898 109.3 53.5 -60.1 -43.1 18.7 12.8 32.4 84 92 A L H X S+ 0 0 26 -4,-1.9 4,-2.9 2,-0.2 5,-0.3 0.864 104.7 53.9 -63.0 -35.9 15.7 15.3 32.3 85 93 A V H X S+ 0 0 36 -4,-2.2 4,-2.5 2,-0.2 -1,-0.2 0.906 107.7 51.1 -62.7 -40.9 16.6 16.7 35.7 86 94 A Q H < S+ 0 0 164 -4,-1.8 -2,-0.2 1,-0.2 -1,-0.2 0.911 116.5 42.1 -59.8 -41.3 20.2 17.3 34.4 87 95 A E H < S+ 0 0 85 -4,-2.2 -2,-0.2 -5,-0.2 -1,-0.2 0.900 124.9 31.2 -70.2 -41.6 18.6 19.1 31.4 88 96 A Y H < S- 0 0 46 -4,-2.9 2,-1.7 2,-0.2 -3,-0.2 0.688 84.5-152.6 -98.7 -24.8 15.9 21.1 33.1 89 97 A G < + 0 0 53 -4,-2.5 -1,-0.1 -5,-0.3 -4,-0.1 -0.295 65.6 82.7 86.9 -56.4 17.5 21.7 36.5 90 98 A T S S- 0 0 87 -2,-1.7 2,-0.4 -42,-0.2 -2,-0.2 -0.415 75.8-123.8 -76.3 165.0 14.4 22.1 38.6 91 99 A M - 0 0 112 -3,-0.1 2,-0.3 -2,-0.1 -19,-0.1 -0.859 5.5-128.3-116.2 143.9 12.5 19.0 39.9 92 100 A M - 0 0 56 -2,-0.4 2,-0.3 -21,-0.1 -17,-0.1 -0.692 39.3-165.1 -73.9 136.4 9.0 17.8 39.6 93 101 A T - 0 0 80 -2,-0.3 -23,-0.0 1,-0.1 0, 0.0 -0.842 28.4 -67.0-131.4 166.8 7.7 17.0 43.2 94 102 A D - 0 0 103 -2,-0.3 -25,-0.1 1,-0.1 -1,-0.1 -0.197 37.1-178.6 -54.4 132.4 4.9 15.2 44.9 95 103 A M - 0 0 55 -27,-0.4 -1,-0.1 -26,-0.1 -26,-0.1 0.227 47.6-112.2-114.4 6.9 1.5 16.8 44.3 96 104 A A + 0 0 82 1,-0.2 2,-0.2 -27,-0.1 -27,-0.1 0.882 58.5 169.1 59.0 40.5 -0.6 14.4 46.5 97 105 A L - 0 0 21 -29,-0.3 2,-0.2 -28,-0.1 -1,-0.2 -0.550 27.6-136.5 -82.1 144.3 -2.2 13.0 43.4 98 106 A S > - 0 0 56 -2,-0.2 4,-2.4 1,-0.1 3,-0.2 -0.660 26.3-109.3 -91.3 158.0 -4.4 9.8 43.5 99 107 A E H > S+ 0 0 111 -2,-0.2 4,-2.8 1,-0.2 5,-0.2 0.850 118.6 53.8 -54.3 -44.0 -4.2 7.1 40.9 100 108 A E H > S+ 0 0 78 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.909 108.7 48.9 -63.3 -37.5 -7.7 8.0 39.5 101 109 A Q H > S+ 0 0 37 -3,-0.2 4,-2.2 2,-0.2 -2,-0.2 0.933 113.2 47.2 -62.1 -46.3 -6.6 11.6 39.0 102 110 A A H X S+ 0 0 0 -4,-2.4 4,-2.6 1,-0.2 -2,-0.2 0.903 109.6 53.4 -64.1 -38.2 -3.4 10.5 37.3 103 111 A R H X S+ 0 0 27 -4,-2.8 4,-2.0 -5,-0.2 -1,-0.2 0.894 108.8 50.1 -66.0 -35.2 -5.4 8.0 35.1 104 112 A A H X S+ 0 0 0 -4,-1.9 4,-2.2 2,-0.2 -75,-0.3 0.932 109.8 50.0 -64.1 -45.5 -7.7 10.9 33.9 105 113 A I H X S+ 0 0 2 -4,-2.2 4,-2.6 2,-0.2 -2,-0.2 0.928 108.1 53.8 -60.0 -40.5 -4.7 13.1 33.1 106 114 A L H X S+ 0 0 1 -4,-2.6 4,-2.3 1,-0.2 -2,-0.2 0.932 106.4 52.5 -61.5 -38.5 -3.2 10.1 31.1 107 115 A E H X S+ 0 0 2 -4,-2.0 4,-2.0 1,-0.2 -1,-0.2 0.898 108.8 49.9 -61.6 -43.2 -6.5 10.0 29.1 108 116 A Y H X S+ 0 0 30 -4,-2.2 4,-2.6 -83,-0.3 -1,-0.2 0.925 108.7 52.5 -59.4 -44.8 -6.2 13.7 28.4 109 117 A L H X S+ 0 0 6 -4,-2.6 4,-1.6 1,-0.2 -53,-0.2 0.899 107.2 51.9 -61.7 -37.2 -2.6 13.2 27.2 110 118 A R H X S+ 0 0 47 -4,-2.3 4,-1.2 -5,-0.2 -1,-0.2 0.922 111.1 50.5 -62.3 -40.1 -3.8 10.4 24.8 111 119 A Q H X S+ 0 0 53 -4,-2.0 4,-1.9 1,-0.2 3,-0.4 0.925 107.3 49.3 -67.0 -45.9 -6.3 12.8 23.5 112 120 A V H X S+ 0 0 2 -4,-2.6 4,-1.3 1,-0.2 -1,-0.2 0.845 105.3 59.3 -67.6 -27.3 -4.0 15.7 22.8 113 121 A A H < S+ 0 0 5 -4,-1.6 -1,-0.2 -5,-0.2 -2,-0.2 0.859 110.3 43.9 -65.8 -32.2 -1.6 13.3 21.0 114 122 A E H < S+ 0 0 129 -4,-1.2 -2,-0.2 -3,-0.4 -1,-0.2 0.835 105.5 61.8 -75.3 -33.8 -4.6 12.6 18.6 115 123 A N H < 0 0 92 -4,-1.9 -2,-0.2 1,-0.2 -1,-0.2 0.818 360.0 360.0 -65.1 -34.8 -5.6 16.3 18.3 116 124 A Q < 0 0 195 -4,-1.3 -1,-0.2 -63,-0.1 -2,-0.1 -0.285 360.0 360.0 57.2 360.0 -2.3 17.2 16.7