==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 19-MAY-05 2CQA . COMPND 2 MOLECULE: RUVB-LIKE 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.ABE,H.HIROTA,K.SAITO,S.KOSHIBA,T.KIGAWA,S.YOKOYAMA,RIKEN . 95 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7877.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 55.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 29 30.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 128 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-177.4 -22.2 16.1 -25.7 2 2 A S + 0 0 123 3,-0.0 0, 0.0 0, 0.0 0, 0.0 0.905 360.0 98.8 -79.3 -45.0 -20.6 13.4 -27.8 3 3 A S + 0 0 125 2,-0.0 2,-0.1 0, 0.0 0, 0.0 -0.162 64.6 66.2 -46.5 127.3 -17.2 13.4 -26.1 4 4 A G - 0 0 68 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.107 50.8-174.3 126.4 135.6 -17.2 10.6 -23.5 5 5 A S - 0 0 119 -2,-0.1 2,-1.5 0, 0.0 3,-0.0 -0.942 42.7 -80.8-150.3 169.3 -17.3 6.8 -23.5 6 6 A S S S+ 0 0 125 -2,-0.3 2,-0.0 1,-0.1 -2,-0.0 -0.593 90.5 89.6 -78.5 90.2 -17.5 3.7 -21.2 7 7 A G + 0 0 56 -2,-1.5 -1,-0.1 1,-0.0 3,-0.0 -0.004 18.0 145.7-142.0-110.5 -13.9 3.4 -20.1 8 8 A K + 0 0 189 1,-0.2 2,-0.1 -2,-0.0 -1,-0.0 0.918 24.4 161.5 59.1 45.8 -11.9 4.9 -17.2 9 9 A E + 0 0 171 1,-0.1 2,-0.4 2,-0.0 -1,-0.2 -0.081 49.1 84.4 -87.6 35.4 -9.8 1.8 -16.9 10 10 A E - 0 0 111 -2,-0.1 2,-0.4 -3,-0.0 -1,-0.1 -0.924 54.0-179.8-143.3 114.3 -7.2 3.7 -14.9 11 11 A T - 0 0 94 -2,-0.4 -2,-0.0 2,-0.1 62,-0.0 -0.930 25.9-147.4-117.3 138.3 -7.3 4.4 -11.2 12 12 A E S S+ 0 0 80 -2,-0.4 61,-1.9 60,-0.0 62,-0.9 -0.096 76.2 85.8 -91.6 35.5 -4.8 6.3 -9.1 13 13 A I E -A 72 0A 74 59,-0.2 2,-0.4 60,-0.1 59,-0.2 -1.000 52.3-173.7-139.7 138.7 -5.4 4.1 -6.1 14 14 A I E -A 71 0A 38 57,-1.5 57,-1.2 -2,-0.4 2,-0.5 -0.990 2.1-170.4-136.3 127.3 -4.0 0.8 -5.0 15 15 A E E +A 70 0A 85 -2,-0.4 2,-0.3 55,-0.2 55,-0.2 -0.966 20.7 147.4-120.5 127.0 -5.0 -1.4 -2.1 16 16 A G E -A 69 0A 6 53,-1.7 53,-1.3 -2,-0.5 2,-0.9 -0.880 52.7 -80.9-146.2 177.6 -3.1 -4.5 -0.9 17 17 A E E -AB 68 40A 77 23,-0.7 23,-1.0 -2,-0.3 51,-0.2 -0.758 50.7-115.9 -89.8 105.7 -2.1 -6.6 2.1 18 18 A V E + B 0 39A 0 49,-1.8 48,-2.6 -2,-0.9 21,-0.2 -0.123 45.1 169.6 -41.4 98.2 0.8 -4.8 3.9 19 19 A V E - 0 0 38 19,-3.1 2,-0.3 1,-0.3 20,-0.2 0.953 60.6 -9.7 -80.7 -56.6 3.4 -7.5 3.4 20 20 A E E - B 0 38A 126 18,-1.0 18,-2.6 45,-0.1 2,-0.4 -0.994 52.1-156.7-146.3 150.1 6.5 -5.7 4.5 21 21 A I E - B 0 37A 36 -2,-0.3 2,-0.4 16,-0.2 16,-0.2 -0.857 14.0-172.0-132.9 98.8 7.5 -2.1 5.5 22 22 A Q E - B 0 36A 89 14,-3.2 14,-2.5 -2,-0.4 2,-0.5 -0.722 3.1-165.1 -92.4 138.1 11.1 -1.1 5.2 23 23 A I E - B 0 35A 87 -2,-0.4 2,-0.4 12,-0.2 12,-0.2 -0.972 8.2-148.8-127.9 119.4 12.4 2.2 6.5 24 24 A D E - B 0 34A 86 10,-2.2 10,-0.6 -2,-0.5 5,-0.0 -0.705 16.6-136.6 -88.1 132.9 15.7 3.7 5.6 25 25 A R > - 0 0 205 -2,-0.4 3,-0.9 8,-0.1 6,-0.1 -0.511 18.1-120.0 -87.1 155.7 17.4 5.9 8.2 26 26 A P T 3 S+ 0 0 101 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 0.553 85.5 109.8 -69.7 -7.0 19.2 9.2 7.5 27 27 A A T 3 S- 0 0 88 1,-0.2 2,-0.3 4,-0.0 -3,-0.0 0.829 95.4 -6.0 -35.8 -43.9 22.4 7.7 8.8 28 28 A T S < S+ 0 0 121 -3,-0.9 2,-0.4 3,-0.0 -1,-0.2 -0.972 107.0 53.0-158.5 141.5 23.6 7.7 5.3 29 29 A G S S- 0 0 67 -2,-0.3 3,-0.0 1,-0.2 -2,-0.0 -0.889 103.0 -38.3 142.8-110.2 22.2 8.5 1.8 30 30 A T S S- 0 0 136 -2,-0.4 -1,-0.2 2,-0.2 3,-0.1 0.675 70.0-117.5-121.4 -48.3 20.5 11.7 0.9 31 31 A G S S+ 0 0 42 1,-0.4 3,-0.1 -3,-0.1 -3,-0.0 -0.404 73.6 111.1 140.4 -62.3 18.4 12.8 3.8 32 32 A S S S- 0 0 88 1,-0.1 -1,-0.4 -6,-0.0 -2,-0.2 -0.221 83.7 -98.8 -49.6 123.4 14.7 12.9 2.8 33 33 A K - 0 0 132 -3,-0.1 2,-0.4 19,-0.1 -1,-0.1 -0.212 52.2-178.4 -48.5 122.8 13.0 10.1 4.7 34 34 A V E +B 24 0A 53 -10,-0.6 -10,-2.2 -3,-0.1 2,-0.3 -0.987 7.3 165.5-132.1 139.8 12.7 7.1 2.3 35 35 A G E -BC 23 50A 2 15,-1.8 15,-2.6 -2,-0.4 2,-0.4 -0.911 28.4-126.6-145.0 171.7 11.1 3.7 2.7 36 36 A K E -BC 22 49A 100 -14,-2.5 -14,-3.2 -2,-0.3 2,-0.4 -0.981 20.4-169.9-128.9 122.5 9.9 0.6 0.8 37 37 A L E -BC 21 48A 0 11,-2.4 11,-2.9 -2,-0.4 2,-0.4 -0.893 4.7-159.1-113.1 140.8 6.4 -0.9 1.1 38 38 A T E +BC 20 47A 26 -18,-2.6 -19,-3.1 -2,-0.4 -18,-1.0 -0.970 10.6 179.1-122.3 130.6 5.3 -4.2 -0.2 39 39 A L E -BC 18 46A 0 7,-1.5 7,-2.3 -2,-0.4 2,-1.0 -0.992 27.2-131.6-132.6 137.7 1.7 -5.2 -0.9 40 40 A K E +BC 17 45A 93 -23,-1.0 -23,-0.7 -2,-0.4 2,-0.4 -0.746 42.1 158.2 -90.2 99.8 0.2 -8.5 -2.3 41 41 A T + 0 0 20 3,-2.7 3,-0.4 -2,-1.0 -25,-0.1 -0.980 58.6 6.7-127.0 135.5 -2.2 -7.5 -5.0 42 42 A T S S- 0 0 112 -2,-0.4 -1,-0.2 1,-0.2 3,-0.1 0.965 129.4 -57.6 62.8 54.8 -3.5 -9.5 -7.9 43 43 A E S S+ 0 0 123 -3,-0.2 2,-0.3 1,-0.1 -1,-0.2 0.757 128.9 86.4 48.2 25.0 -1.9 -12.8 -6.8 44 44 A M S S- 0 0 107 -3,-0.4 -3,-2.7 2,-0.0 2,-0.4 -0.991 73.7-129.9-153.9 145.0 1.3 -10.7 -7.0 45 45 A E E -C 40 0A 106 -2,-0.3 2,-0.4 -5,-0.3 -5,-0.2 -0.782 21.1-167.7 -99.5 140.1 3.3 -8.4 -4.7 46 46 A T E -C 39 0A 44 -7,-2.3 -7,-1.5 -2,-0.4 2,-0.3 -0.990 16.7-130.6-130.5 134.7 4.5 -5.0 -5.8 47 47 A I E -C 38 0A 109 -2,-0.4 2,-0.4 -9,-0.2 -9,-0.2 -0.590 20.4-159.9 -83.4 142.2 7.0 -2.7 -4.2 48 48 A Y E -C 37 0A 35 -11,-2.9 -11,-2.4 -2,-0.3 2,-0.5 -0.983 16.5-127.3-127.0 132.7 6.1 1.0 -3.6 49 49 A D E -C 36 0A 124 -2,-0.4 2,-0.5 -13,-0.2 -13,-0.2 -0.652 23.6-153.3 -80.0 121.8 8.5 3.9 -3.0 50 50 A L E -C 35 0A 0 -15,-2.6 -15,-1.8 -2,-0.5 -1,-0.0 -0.839 11.1-171.4 -99.7 127.9 7.6 5.9 0.1 51 51 A G - 0 0 29 -2,-0.5 -1,-0.1 -17,-0.2 4,-0.1 0.557 49.0 -71.7 -84.7-126.0 8.5 9.5 0.3 52 52 A T S > S+ 0 0 61 2,-0.1 4,-0.8 3,-0.1 -18,-0.1 0.588 129.4 45.5-110.8 -19.7 8.2 11.7 3.4 53 53 A K H > S+ 0 0 154 2,-0.2 4,-0.8 1,-0.1 25,-0.3 0.735 106.5 58.4 -94.2 -28.3 4.5 12.1 3.5 54 54 A M H > S+ 0 0 26 1,-0.2 4,-1.0 2,-0.2 3,-0.1 0.838 105.7 50.9 -70.0 -33.7 3.7 8.4 2.9 55 55 A I H >> S+ 0 0 13 1,-0.2 4,-1.7 2,-0.2 3,-0.9 0.942 99.2 62.0 -69.2 -49.3 5.6 7.4 6.0 56 56 A E H 3X S+ 0 0 124 -4,-0.8 4,-2.7 1,-0.3 -1,-0.2 0.816 104.1 52.7 -46.1 -33.6 3.9 9.9 8.3 57 57 A S H 3X S+ 0 0 24 -4,-0.8 4,-1.2 1,-0.2 6,-0.3 0.885 106.7 49.9 -71.5 -40.0 0.7 7.9 7.5 58 58 A L H <<>S+ 0 0 11 -4,-1.0 5,-1.1 -3,-0.9 -2,-0.2 0.689 116.1 45.4 -71.7 -18.2 2.3 4.6 8.4 59 59 A T H ><5S+ 0 0 78 -4,-1.7 3,-1.4 3,-0.2 -2,-0.2 0.911 104.6 55.8 -89.0 -53.3 3.4 6.1 11.7 60 60 A K H 3<5S+ 0 0 146 -4,-2.7 -2,-0.2 1,-0.3 -3,-0.1 0.827 127.1 25.6 -48.8 -34.4 0.2 8.0 12.8 61 61 A D T 3<5S- 0 0 59 -4,-1.2 -1,-0.3 -5,-0.2 -2,-0.2 0.287 102.7-132.0-112.2 5.9 -1.5 4.6 12.5 62 62 A K T < 5 - 0 0 158 -3,-1.4 -3,-0.2 1,-0.2 -4,-0.1 0.870 30.8-157.2 42.6 45.6 1.6 2.5 13.1 63 63 A V < - 0 0 8 -5,-1.1 2,-0.2 -6,-0.3 -1,-0.2 -0.301 17.0-179.7 -55.4 126.4 0.6 0.5 10.0 64 64 A Q > - 0 0 133 -3,-0.2 3,-1.2 1,-0.1 -46,-0.1 -0.716 33.7 -69.7-123.9 174.9 2.2 -3.0 10.2 65 65 A A T 3 S+ 0 0 52 -2,-0.2 -46,-0.2 1,-0.2 -1,-0.1 -0.237 111.7 39.3 -63.3 152.8 2.3 -6.2 8.2 66 66 A G T 3 S+ 0 0 53 -48,-2.6 -1,-0.2 1,-0.4 -47,-0.1 -0.029 96.0 98.1 97.4 -31.3 -0.9 -8.3 8.0 67 67 A D S < S- 0 0 53 -3,-1.2 -49,-1.8 -49,-0.2 2,-0.5 -0.301 74.8-116.1 -84.5 172.1 -3.2 -5.2 7.7 68 68 A V E +AD 17 82A 9 14,-1.9 13,-1.9 -51,-0.2 14,-1.7 -0.950 36.4 170.1-116.7 120.2 -4.7 -3.7 4.6 69 69 A I E -AD 16 80A 0 -53,-1.3 -53,-1.7 -2,-0.5 11,-0.2 -0.899 20.9-136.9-127.0 156.3 -3.8 -0.2 3.5 70 70 A T E -AD 15 79A 18 9,-3.1 9,-0.5 -2,-0.3 2,-0.4 -0.603 7.4-144.6-107.1 169.4 -4.4 1.9 0.4 71 71 A I E -AD 14 78A 3 -57,-1.2 -57,-1.5 -2,-0.2 2,-0.9 -0.944 2.1-155.7-140.8 116.4 -2.1 4.2 -1.6 72 72 A D E >> +AD 13 77A 49 5,-3.3 4,-2.3 -2,-0.4 5,-0.6 -0.799 11.0 179.8 -94.6 105.3 -3.2 7.4 -3.4 73 73 A K T 45S+ 0 0 123 -61,-1.9 -1,-0.2 -2,-0.9 -60,-0.1 0.717 78.9 65.8 -74.6 -21.2 -0.9 8.2 -6.2 74 74 A A T 45S+ 0 0 75 -62,-0.9 -1,-0.2 1,-0.1 -61,-0.1 0.945 126.0 8.0 -65.4 -50.1 -2.9 11.3 -7.0 75 75 A T T 45S- 0 0 82 2,-0.2 -2,-0.2 -3,-0.0 -1,-0.1 0.595 100.4-121.4-105.9 -18.3 -2.1 13.1 -3.8 76 76 A G T <5 + 0 0 20 -4,-2.3 2,-0.3 1,-0.3 -3,-0.2 0.770 66.4 133.9 81.8 26.9 0.5 10.6 -2.5 77 77 A K E < -D 72 0A 124 -5,-0.6 -5,-3.3 -20,-0.0 2,-0.4 -0.771 45.0-142.0-109.9 155.5 -1.3 9.9 0.7 78 78 A I E -D 71 0A 13 -2,-0.3 2,-0.3 -25,-0.3 -7,-0.2 -0.930 13.7-168.7-119.5 141.8 -2.1 6.5 2.4 79 79 A S E -D 70 0A 79 -9,-0.5 -9,-3.1 -2,-0.4 2,-0.4 -0.925 17.7-127.1-128.3 152.9 -5.2 5.4 4.2 80 80 A K E +D 69 0A 90 -2,-0.3 -11,-0.2 -11,-0.2 -22,-0.0 -0.814 27.4 165.8-101.8 138.6 -6.1 2.5 6.4 81 81 A L E - 0 0 85 -13,-1.9 2,-0.6 -2,-0.4 -12,-0.2 0.679 36.4-137.0-116.7 -37.7 -9.1 0.2 5.8 82 82 A G E +D 68 0A 10 -14,-1.7 -14,-1.9 2,-0.0 2,-0.2 -0.885 60.0 4.1 119.8-102.5 -8.5 -2.8 7.9 83 83 A R - 0 0 203 -2,-0.6 2,-0.3 -16,-0.2 -16,-0.1 -0.628 58.6-160.9-115.9 175.6 -9.2 -6.2 6.4 84 84 A S - 0 0 66 -2,-0.2 2,-0.8 2,-0.0 -68,-0.0 -0.960 25.4-110.4-151.8 166.3 -10.3 -7.4 3.0 85 85 A F - 0 0 208 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.846 35.5-174.2-107.6 98.4 -11.8 -10.4 1.2 86 86 A T - 0 0 100 -2,-0.8 2,-0.7 1,-0.0 -2,-0.0 -0.767 20.1-134.4 -95.1 134.8 -9.2 -12.2 -1.0 87 87 A R + 0 0 219 -2,-0.4 2,-0.3 2,-0.0 -2,-0.0 -0.785 30.3 177.4 -91.6 115.2 -10.3 -15.0 -3.3 88 88 A A - 0 0 83 -2,-0.7 2,-0.4 -45,-0.0 -2,-0.0 -0.864 29.9-115.0-118.2 152.2 -7.8 -18.0 -3.1 89 89 A R + 0 0 198 -2,-0.3 -2,-0.0 1,-0.2 0, 0.0 -0.719 42.9 151.8 -88.4 129.9 -7.9 -21.4 -4.8 90 90 A S - 0 0 114 -2,-0.4 -1,-0.2 1,-0.1 3,-0.0 0.692 32.5-150.3-119.7 -55.7 -8.3 -24.4 -2.5 91 91 A G + 0 0 68 0, 0.0 2,-0.6 0, 0.0 -1,-0.1 -0.830 68.7 67.4 121.3 -94.8 -10.0 -27.2 -4.4 92 92 A P S S- 0 0 117 0, 0.0 2,-0.4 0, 0.0 0, 0.0 -0.535 71.6-150.9 -69.7 110.8 -12.1 -29.5 -2.2 93 93 A S + 0 0 118 -2,-0.6 0, 0.0 1,-0.2 0, 0.0 -0.680 30.3 157.4 -87.1 134.9 -15.0 -27.5 -0.9 94 94 A S 0 0 127 -2,-0.4 -1,-0.2 0, 0.0 0, 0.0 0.671 360.0 360.0-121.1 -45.9 -16.5 -28.6 2.5 95 95 A G 0 0 129 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 0.559 360.0 360.0 61.9 360.0 -18.3 -25.5 3.8