==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 20-MAY-05 2CQK . COMPND 2 MOLECULE: C-MPL BINDING PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, . 101 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7874.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 56 55.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 6.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 36.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 4 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 36 A G 0 0 140 0, 0.0 2,-0.4 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0-127.2 13.9 5.6 27.7 2 37 A S - 0 0 96 1,-0.2 0, 0.0 2,-0.1 0, 0.0 -0.992 360.0-130.3-133.8 128.6 15.0 6.2 24.1 3 38 A S S S- 0 0 146 -2,-0.4 -1,-0.2 2,-0.1 2,-0.1 0.885 87.8 -28.3 -36.4 -59.6 16.4 9.3 22.5 4 39 A G S S- 0 0 50 2,-0.1 -2,-0.1 -3,-0.1 3,-0.1 0.028 73.8 -93.8-128.6-123.7 13.9 9.0 19.6 5 40 A S S S+ 0 0 125 1,-0.4 2,-0.2 2,-0.1 -1,-0.1 0.550 92.6 45.4-132.5 -59.2 12.2 6.1 17.9 6 41 A S - 0 0 107 1,-0.1 -1,-0.4 3,-0.0 -2,-0.1 -0.518 63.3-159.9 -92.2 161.5 14.2 4.9 14.8 7 42 A G - 0 0 62 1,-0.3 -1,-0.1 -2,-0.2 -2,-0.1 0.153 51.1 -0.3-110.9-132.8 17.9 4.2 14.6 8 43 A A S S- 0 0 88 1,-0.1 2,-0.5 -2,-0.0 -1,-0.3 0.141 71.0-114.5 -49.7 174.6 20.3 4.0 11.7 9 44 A V + 0 0 123 -3,-0.1 2,-0.2 4,-0.0 -1,-0.1 -0.913 49.7 144.8-124.2 105.1 19.2 4.4 8.1 10 45 A S >> - 0 0 67 -2,-0.5 4,-2.0 1,-0.0 3,-0.6 -0.787 64.2 -93.7-130.9 174.0 19.4 1.3 5.9 11 46 A T H 3> S+ 0 0 92 -2,-0.2 4,-2.5 1,-0.2 5,-0.2 0.803 122.9 60.4 -58.2 -29.6 17.5 -0.3 3.0 12 47 A E H 3> S+ 0 0 130 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.900 106.5 44.1 -65.6 -42.0 15.8 -2.5 5.6 13 48 A D H <> S+ 0 0 76 -3,-0.6 4,-2.1 2,-0.2 -2,-0.2 0.860 113.7 51.1 -70.9 -36.6 14.3 0.6 7.3 14 49 A L H X S+ 0 0 77 -4,-2.0 4,-1.9 2,-0.2 -2,-0.2 0.918 112.0 45.8 -67.0 -44.7 13.3 2.2 4.0 15 50 A K H X S+ 0 0 98 -4,-2.5 4,-2.0 2,-0.2 -2,-0.2 0.909 112.0 51.6 -65.0 -43.2 11.5 -0.9 2.8 16 51 A E H X S+ 0 0 97 -4,-2.0 4,-1.9 1,-0.2 -2,-0.2 0.915 109.0 50.4 -60.2 -45.0 9.7 -1.4 6.1 17 52 A C H X S+ 0 0 54 -4,-2.1 4,-2.0 1,-0.2 -1,-0.2 0.908 108.5 52.3 -60.4 -43.7 8.5 2.2 6.1 18 53 A L H X S+ 0 0 2 -4,-1.9 4,-2.2 1,-0.2 -1,-0.2 0.892 107.7 52.0 -60.2 -41.1 7.2 1.8 2.5 19 54 A K H X S+ 0 0 69 -4,-2.0 4,-2.4 1,-0.2 -1,-0.2 0.889 109.2 49.7 -63.0 -40.3 5.2 -1.3 3.5 20 55 A K H X S+ 0 0 126 -4,-1.9 4,-3.0 2,-0.2 5,-0.3 0.860 108.9 53.4 -67.0 -36.3 3.6 0.6 6.5 21 56 A Q H X S+ 0 0 31 -4,-2.0 4,-2.9 2,-0.2 -2,-0.2 0.944 113.2 41.2 -64.1 -49.8 2.6 3.4 4.2 22 57 A L H X S+ 0 0 2 -4,-2.2 4,-1.6 2,-0.2 -2,-0.2 0.916 119.0 46.1 -64.9 -44.3 0.8 1.2 1.7 23 58 A E H < S+ 0 0 29 -4,-2.4 -2,-0.2 -5,-0.2 4,-0.2 0.923 117.8 42.6 -64.6 -45.8 -0.7 -0.9 4.4 24 59 A F H >< S+ 0 0 132 -4,-3.0 3,-1.1 1,-0.2 6,-0.3 0.900 112.5 53.2 -67.7 -42.0 -1.8 2.1 6.4 25 60 A C H 3< S+ 0 0 9 -4,-2.9 -1,-0.2 -5,-0.3 -2,-0.2 0.823 114.4 42.6 -62.7 -31.8 -3.0 4.0 3.3 26 61 A F T 3< S+ 0 0 8 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.2 0.405 92.0 123.0 -93.9 0.5 -5.1 1.0 2.4 27 62 A S S <> S- 0 0 35 -3,-1.1 4,-2.9 -4,-0.2 5,-0.2 -0.159 74.8-116.2 -60.2 157.1 -6.2 0.6 6.0 28 63 A R H > S+ 0 0 228 2,-0.2 4,-1.9 1,-0.2 5,-0.1 0.920 117.0 41.9 -61.5 -45.6 -9.9 0.6 6.9 29 64 A E H > S+ 0 0 155 2,-0.2 4,-1.2 1,-0.2 -1,-0.2 0.912 117.2 47.2 -68.5 -43.7 -9.6 3.8 9.0 30 65 A N H > S+ 0 0 17 -6,-0.3 4,-2.5 2,-0.2 -2,-0.2 0.880 111.1 52.4 -65.4 -39.0 -7.2 5.4 6.5 31 66 A L H < S+ 0 0 23 -4,-2.9 7,-0.3 1,-0.2 -1,-0.2 0.918 114.4 40.9 -63.4 -44.8 -9.5 4.5 3.6 32 67 A S H < S+ 0 0 82 -4,-1.9 -1,-0.2 -5,-0.2 -2,-0.2 0.662 117.9 50.2 -77.4 -16.7 -12.5 6.1 5.2 33 68 A K H < S+ 0 0 142 -4,-1.2 2,-1.3 1,-0.2 -2,-0.2 0.766 97.5 70.7 -90.3 -30.1 -10.4 9.0 6.4 34 69 A D X + 0 0 29 -4,-2.5 4,-2.1 1,-0.2 5,-0.2 -0.678 57.6 177.2 -91.7 85.4 -8.8 9.7 3.0 35 70 A L H > S+ 0 0 138 -2,-1.3 4,-1.8 1,-0.2 -1,-0.2 0.828 82.5 54.5 -55.7 -32.8 -11.8 11.1 1.1 36 71 A Y H > S+ 0 0 118 2,-0.2 4,-1.6 1,-0.2 -1,-0.2 0.924 105.0 51.2 -68.0 -45.8 -9.4 11.7 -1.8 37 72 A L H > S+ 0 0 2 1,-0.2 4,-1.5 2,-0.2 -2,-0.2 0.911 111.6 47.7 -58.1 -44.6 -8.3 8.0 -1.9 38 73 A I H < S+ 0 0 71 -4,-2.1 -1,-0.2 -7,-0.3 -2,-0.2 0.876 109.9 52.5 -64.8 -38.6 -11.9 6.9 -2.0 39 74 A S H < S+ 0 0 98 -4,-1.8 -1,-0.2 -5,-0.2 -2,-0.2 0.782 111.1 48.0 -68.1 -27.1 -12.8 9.3 -4.7 40 75 A Q H < S+ 0 0 67 -4,-1.6 -1,-0.2 -3,-0.2 -2,-0.2 0.749 92.2 103.0 -83.9 -26.5 -9.9 8.0 -6.8 41 76 A M S < S- 0 0 28 -4,-1.5 6,-0.2 -5,-0.2 2,-0.1 0.133 72.0-115.1 -47.9 172.3 -10.9 4.4 -6.2 42 77 A D > - 0 0 86 4,-1.2 3,-1.1 1,-0.0 -1,-0.1 -0.390 28.5 -93.8-105.1-175.5 -12.6 2.4 -9.0 43 78 A S T 3 S+ 0 0 111 1,-0.3 -2,-0.1 2,-0.1 -1,-0.0 0.875 126.2 48.7 -67.5 -38.3 -16.1 0.9 -9.4 44 79 A D T 3 S- 0 0 119 2,-0.1 -1,-0.3 1,-0.0 -3,-0.0 -0.070 129.3 -95.5 -92.6 33.3 -14.8 -2.5 -8.2 45 80 A Q S < S+ 0 0 119 -3,-1.1 2,-0.4 1,-0.2 -2,-0.1 0.927 80.4 146.2 54.0 49.5 -13.1 -0.9 -5.2 46 81 A F - 0 0 42 42,-0.1 -4,-1.2 -6,-0.1 42,-0.2 -0.954 38.3-148.8-121.4 137.3 -9.8 -0.7 -7.0 47 82 A I E -A 87 0A 0 40,-2.8 40,-2.5 -2,-0.4 2,-0.2 -0.858 23.3-113.8-107.5 138.1 -7.1 1.9 -6.7 48 83 A P E >> -A 86 0A 9 0, 0.0 4,-1.3 0, 0.0 3,-0.6 -0.467 13.2-140.0 -69.8 132.6 -4.8 3.0 -9.5 49 84 A I H 3> S+ 0 0 23 36,-1.1 4,-3.1 1,-0.2 5,-0.2 0.822 102.1 63.6 -60.9 -31.6 -1.1 2.1 -9.0 50 85 A W H 3> S+ 0 0 134 35,-0.3 4,-1.2 1,-0.2 -1,-0.2 0.884 99.1 53.4 -60.4 -39.9 -0.2 5.5 -10.5 51 86 A T H <> S+ 0 0 5 -3,-0.6 4,-0.5 2,-0.2 -1,-0.2 0.914 114.5 40.2 -62.1 -44.5 -2.0 7.3 -7.7 52 87 A V H >< S+ 0 0 1 -4,-1.3 3,-0.7 1,-0.2 -2,-0.2 0.886 115.0 51.3 -72.0 -40.3 0.0 5.4 -5.1 53 88 A A H 3< S+ 0 0 29 -4,-3.1 -1,-0.2 1,-0.2 -2,-0.2 0.687 109.3 53.0 -69.9 -18.1 3.3 5.6 -7.0 54 89 A N H 3< S+ 0 0 92 -4,-1.2 -1,-0.2 -5,-0.2 -2,-0.2 0.604 81.9 119.5 -91.0 -14.7 2.7 9.3 -7.3 55 90 A M S+ 0 0 174 2,-0.2 4,-2.7 1,-0.2 5,-0.3 0.945 107.1 46.0 -58.0 -51.3 4.9 12.1 -2.1 57 92 A E H > S+ 0 0 89 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.897 115.9 46.4 -59.3 -42.2 5.7 9.7 0.8 58 93 A I H > S+ 0 0 1 -6,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.818 112.8 50.8 -70.3 -31.2 5.8 6.8 -1.6 59 94 A K H < S+ 0 0 110 -4,-2.5 -2,-0.2 2,-0.2 -1,-0.2 0.884 112.2 45.1 -73.4 -40.1 8.0 8.8 -4.0 60 95 A K H < S+ 0 0 158 -4,-2.7 -2,-0.2 -5,-0.2 -1,-0.2 0.801 118.9 43.5 -73.1 -29.8 10.5 9.9 -1.3 61 96 A L H < S+ 0 0 24 -4,-1.7 2,-0.3 1,-0.3 -2,-0.2 0.825 133.2 3.0 -83.5 -34.8 10.6 6.3 0.1 62 97 A T < - 0 0 15 -4,-2.2 -1,-0.3 -5,-0.2 -47,-0.0 -0.975 45.3-175.0-155.5 138.6 10.8 4.7 -3.4 63 98 A T + 0 0 131 -2,-0.3 -4,-0.1 -3,-0.1 -3,-0.1 0.139 63.5 95.0-118.1 16.4 11.0 5.9 -7.0 64 99 A D > - 0 0 80 1,-0.1 4,-1.9 2,-0.0 5,-0.1 -0.936 57.1-157.7-115.3 130.7 10.8 2.4 -8.6 65 100 A P H > S+ 0 0 75 0, 0.0 4,-3.0 0, 0.0 5,-0.2 0.883 95.3 53.3 -69.7 -40.5 7.5 0.9 -9.9 66 101 A D H > S+ 0 0 116 2,-0.2 4,-2.0 1,-0.2 5,-0.1 0.908 110.8 46.9 -62.0 -43.4 8.8 -2.7 -9.7 67 102 A L H > S+ 0 0 62 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.929 115.2 45.3 -64.9 -46.6 9.8 -2.3 -6.1 68 103 A I H X S+ 0 0 4 -4,-1.9 4,-2.2 1,-0.2 -2,-0.2 0.925 112.0 51.6 -63.2 -46.2 6.5 -0.7 -5.1 69 104 A L H X S+ 0 0 39 -4,-3.0 4,-2.7 1,-0.2 5,-0.3 0.886 108.9 51.7 -58.3 -40.7 4.5 -3.2 -7.0 70 105 A E H X S+ 0 0 122 -4,-2.0 4,-2.2 -5,-0.2 -1,-0.2 0.896 108.3 51.2 -63.8 -41.3 6.3 -6.0 -5.3 71 106 A V H X S+ 0 0 15 -4,-1.9 4,-1.4 2,-0.2 -2,-0.2 0.912 113.2 44.7 -62.6 -44.2 5.6 -4.5 -1.8 72 107 A L H < S+ 0 0 0 -4,-2.2 6,-0.4 2,-0.2 3,-0.3 0.941 119.6 40.2 -66.0 -48.9 1.9 -4.2 -2.6 73 108 A R H < S+ 0 0 130 -4,-2.7 -2,-0.2 1,-0.2 -1,-0.2 0.753 113.3 57.2 -71.5 -24.6 1.6 -7.7 -4.1 74 109 A S H < S+ 0 0 88 -4,-2.2 -1,-0.2 -5,-0.3 -2,-0.2 0.776 99.7 70.1 -76.4 -27.4 4.0 -9.0 -1.4 75 110 A S S < S- 0 0 8 -4,-1.4 3,-0.4 -3,-0.3 0, 0.0 -0.725 71.8-147.5 -95.7 141.4 1.7 -7.8 1.4 76 111 A P S S+ 0 0 79 0, 0.0 14,-0.6 0, 0.0 -1,-0.1 0.944 92.1 71.6 -69.7 -50.5 -1.7 -9.4 2.1 77 112 A M S S+ 0 0 77 12,-0.1 13,-1.4 14,-0.1 2,-0.3 0.779 112.3 31.8 -36.2 -33.1 -3.5 -6.2 3.2 78 113 A V E S-B 89 0A 3 -3,-0.4 2,-0.4 -6,-0.4 -55,-0.0 -0.872 70.4-157.4-128.0 161.2 -3.3 -5.3 -0.5 79 114 A Q E -B 88 0A 115 9,-1.4 9,-1.9 -2,-0.3 2,-0.5 -0.972 6.5-151.7-144.0 125.3 -3.3 -7.2 -3.8 80 115 A V E -B 87 0A 5 -2,-0.4 7,-0.2 7,-0.2 -2,-0.0 -0.842 35.1-102.2-100.1 127.7 -2.0 -6.2 -7.2 81 116 A D - 0 0 67 5,-2.6 3,-0.2 -2,-0.5 -1,-0.1 -0.110 35.6-110.4 -45.0 134.9 -3.6 -7.6 -10.3 82 117 A E S S+ 0 0 179 1,-0.3 -1,-0.1 2,-0.1 -2,-0.1 0.834 123.3 44.9 -35.7 -44.9 -1.5 -10.4 -11.8 83 118 A K S S- 0 0 166 3,-0.1 -1,-0.3 0, 0.0 -2,-0.1 0.930 114.4-121.4 -68.8 -46.9 -0.7 -7.9 -14.6 84 119 A G S S+ 0 0 19 -3,-0.2 -2,-0.1 2,-0.2 3,-0.1 0.855 75.3 111.0 102.6 61.6 -0.1 -5.0 -12.4 85 120 A E S S+ 0 0 125 1,-0.4 -36,-1.1 -36,-0.0 2,-0.3 0.557 77.5 25.7-130.2 -32.3 -2.5 -2.2 -13.2 86 121 A K E -A 48 0A 59 -38,-0.2 -5,-2.6 -37,-0.1 -1,-0.4 -0.991 60.5-160.2-139.8 146.7 -4.9 -2.0 -10.2 87 122 A V E -AB 47 80A 0 -40,-2.5 -40,-2.8 -2,-0.3 -7,-0.2 -0.982 5.8-170.5-130.3 139.8 -4.6 -2.8 -6.5 88 123 A R E - B 0 79A 66 -9,-1.9 -9,-1.4 -2,-0.4 2,-0.5 -0.972 32.2-104.9-131.2 144.6 -7.3 -3.5 -4.0 89 124 A P E - B 0 78A 24 0, 0.0 2,-0.4 0, 0.0 -11,-0.3 -0.529 45.0-107.0 -69.8 115.3 -7.2 -3.9 -0.2 90 125 A S - 0 0 43 -13,-1.4 2,-0.5 -14,-0.6 4,-0.1 -0.173 35.5-169.5 -45.0 96.7 -7.7 -7.5 0.7 91 126 A H + 0 0 133 -2,-0.4 2,-0.3 2,-0.1 -1,-0.2 -0.118 61.7 78.0 -85.4 38.5 -11.2 -7.3 2.1 92 127 A K S S- 0 0 148 -2,-0.5 2,-0.6 -15,-0.1 -2,-0.0 -0.947 79.0-127.2-151.6 126.4 -11.0 -10.9 3.4 93 128 A R + 0 0 243 -2,-0.3 -2,-0.1 1,-0.2 3,-0.0 -0.616 29.2 170.5 -76.3 117.8 -9.3 -12.3 6.5 94 129 A C + 0 0 109 -2,-0.6 2,-0.2 -4,-0.1 -1,-0.2 0.817 62.8 52.3 -94.3 -39.2 -6.9 -15.1 5.5 95 130 A I - 0 0 84 1,-0.1 5,-0.1 2,-0.1 0, 0.0 -0.625 67.4-146.2 -98.7 158.7 -5.2 -15.6 8.8 96 131 A S - 0 0 129 -2,-0.2 -1,-0.1 3,-0.1 4,-0.1 0.908 58.5 -82.0 -87.4 -50.9 -6.7 -16.1 12.3 97 132 A G S S+ 0 0 43 2,-0.2 -2,-0.1 0, 0.0 0, 0.0 -0.225 115.3 37.4-175.4 -85.1 -4.2 -14.3 14.4 98 133 A P S S+ 0 0 136 0, 0.0 2,-0.6 0, 0.0 -3,-0.0 0.509 101.5 90.6 -69.7 -3.4 -0.9 -15.9 15.6 99 134 A S + 0 0 80 0, 0.0 2,-0.2 0, 0.0 -2,-0.2 -0.858 46.3 140.5-100.8 121.8 -0.7 -17.6 12.2 100 135 A S 0 0 91 -2,-0.6 -5,-0.0 1,-0.1 0, 0.0 -0.772 360.0 360.0-163.3 111.9 1.2 -15.7 9.5 101 136 A G 0 0 134 -2,-0.2 -1,-0.1 0, 0.0 0, 0.0 0.995 360.0 360.0 70.7 360.0 3.5 -17.0 6.8