==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 20-MAY-05 2CQR . COMPND 2 MOLECULE: DNAJ HOMOLOG SUBFAMILY C MEMBER 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR Y.DOI-KATAYAMA,H.HIROTA,F.HAYASHI,S.YOKOYAMA,RIKEN . 73 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6348.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 40 54.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 13.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 37.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 137 0, 0.0 2,-0.2 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0-141.5 21.9 22.0 8.4 2 2 A S - 0 0 118 1,-0.1 2,-0.9 0, 0.0 0, 0.0 -0.502 360.0 -87.4 -80.9 149.0 25.5 22.5 7.2 3 3 A S S S+ 0 0 132 -2,-0.2 2,-0.3 2,-0.0 -1,-0.1 -0.365 74.8 144.0 -57.8 98.2 26.3 22.9 3.5 4 4 A G - 0 0 67 -2,-0.9 3,-0.1 1,-0.1 0, 0.0 -0.964 41.7-166.2-140.7 157.4 26.5 19.3 2.4 5 5 A S S S+ 0 0 140 -2,-0.3 2,-0.2 1,-0.2 -1,-0.1 0.824 75.2 55.6-105.1 -59.8 25.7 17.0 -0.5 6 6 A S S S+ 0 0 120 1,-0.0 2,-0.3 0, 0.0 -1,-0.2 -0.557 78.1 81.4 -80.1 140.8 26.0 13.4 0.6 7 7 A G S S- 0 0 70 -2,-0.2 2,-0.1 -3,-0.1 -1,-0.0 -0.895 75.9 -10.0 168.8-136.3 23.9 12.3 3.6 8 8 A S - 0 0 129 -2,-0.3 2,-0.3 1,-0.1 -1,-0.1 -0.285 65.8-103.0 -88.1 176.6 20.4 11.2 4.4 9 9 A L - 0 0 140 -2,-0.1 2,-0.4 0, 0.0 -1,-0.1 -0.811 26.1-142.2-104.9 144.0 17.3 11.3 2.2 10 10 A R - 0 0 214 -2,-0.3 0, 0.0 1,-0.1 0, 0.0 -0.827 25.2-105.4-106.5 143.4 14.5 13.9 2.5 11 11 A K + 0 0 176 -2,-0.4 2,-0.2 4,-0.0 3,-0.1 -0.241 44.1 164.7 -62.2 151.2 10.8 13.2 2.0 12 12 A E >> - 0 0 114 1,-0.1 4,-1.2 2,-0.0 3,-1.0 -0.692 40.1-140.5-173.7 115.1 9.2 14.3 -1.3 13 13 A R T 34 S+ 0 0 223 1,-0.3 3,-0.5 2,-0.2 -1,-0.1 0.872 104.4 63.7 -43.7 -45.0 5.8 13.3 -2.9 14 14 A A T 34 S+ 0 0 62 1,-0.3 -1,-0.3 2,-0.1 -3,-0.0 0.914 97.5 54.6 -46.7 -52.0 7.6 13.4 -6.2 15 15 A R T <4 S- 0 0 114 -3,-1.0 -1,-0.3 1,-0.1 -2,-0.2 0.894 86.8-162.1 -50.4 -44.8 9.8 10.5 -5.1 16 16 A S < + 0 0 54 -4,-1.2 3,-0.4 -3,-0.5 -3,-0.1 0.892 33.1 149.8 60.1 41.0 6.7 8.4 -4.3 17 17 A A S S+ 0 0 73 -5,-0.3 2,-0.7 1,-0.3 -4,-0.1 0.961 70.9 30.5 -68.0 -53.5 8.8 6.1 -2.1 18 18 A E S S- 0 0 179 -5,-0.0 -1,-0.3 40,-0.0 -2,-0.1 -0.736 84.4-167.4-110.9 82.5 6.0 5.2 0.3 19 19 A E - 0 0 112 -2,-0.7 -6,-0.0 -3,-0.4 -2,-0.0 -0.264 24.5-104.0 -67.0 154.1 2.8 5.4 -1.6 20 20 A P - 0 0 103 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 -0.035 32.2-105.4 -69.8 177.7 -0.6 5.4 0.2 21 21 A W - 0 0 38 4,-0.1 2,-0.1 3,-0.0 0, 0.0 -0.943 28.0-143.4-114.9 119.1 -3.0 2.4 0.5 22 22 A T > - 0 0 64 -2,-0.5 4,-2.5 1,-0.1 5,-0.5 -0.419 35.8 -98.6 -77.4 153.4 -6.2 2.5 -1.5 23 23 A Q H > S+ 0 0 165 1,-0.2 4,-0.7 2,-0.2 -1,-0.1 0.787 127.4 50.2 -38.6 -33.1 -9.4 1.0 -0.2 24 24 A N H >> S+ 0 0 77 2,-0.2 4,-3.0 3,-0.2 3,-1.2 0.991 111.0 42.2 -71.6 -65.7 -8.5 -2.0 -2.2 25 25 A Q H 3> S+ 0 0 24 1,-0.3 4,-2.5 2,-0.2 5,-0.3 0.920 113.5 53.6 -46.7 -53.6 -4.9 -2.6 -1.1 26 26 A Q H 3X S+ 0 0 44 -4,-2.5 4,-1.5 1,-0.2 -1,-0.3 0.805 116.5 41.6 -53.3 -30.4 -5.8 -1.9 2.5 27 27 A K H X S+ 0 0 0 -4,-2.5 4,-3.1 -5,-0.3 3,-0.6 0.989 109.3 48.5 -69.5 -62.9 -4.0 -7.0 2.8 30 30 A E H 3X S+ 0 0 86 -4,-1.5 4,-0.9 1,-0.3 -2,-0.2 0.916 113.0 48.7 -42.1 -58.2 -6.2 -7.2 5.9 31 31 A L H 3X S+ 0 0 79 -4,-2.4 4,-1.2 1,-0.2 3,-0.5 0.865 114.0 48.7 -52.5 -38.7 -8.1 -10.2 4.5 32 32 A A H XX S+ 0 0 0 -4,-1.2 4,-3.0 -3,-0.6 3,-0.7 0.963 96.8 65.8 -67.0 -53.9 -4.7 -11.8 3.7 33 33 A L H 3< S+ 0 0 30 -4,-3.1 -1,-0.2 1,-0.3 -2,-0.2 0.741 105.7 49.9 -40.5 -24.9 -3.2 -11.2 7.2 34 34 A Q H 3< S+ 0 0 155 -4,-0.9 -1,-0.3 -3,-0.5 -2,-0.2 0.900 114.7 39.2 -82.7 -45.6 -5.9 -13.6 8.3 35 35 A Q H << S+ 0 0 129 -4,-1.2 -2,-0.2 -3,-0.7 -3,-0.1 0.924 124.8 38.7 -70.3 -46.2 -5.2 -16.3 5.7 36 36 A Y S < S- 0 0 53 -4,-3.0 -1,-0.3 -5,-0.1 11,-0.1 -0.728 84.0-179.1-109.8 82.3 -1.4 -16.0 5.9 37 37 A P - 0 0 76 0, 0.0 -3,-0.1 0, 0.0 10,-0.1 -0.012 41.1 -57.1 -69.8 179.4 -0.6 -15.4 9.6 38 38 A R S S+ 0 0 170 -5,-0.1 2,-0.3 1,-0.1 3,-0.0 0.027 85.4 94.5 -52.8 166.7 2.9 -14.8 11.1 39 39 A G S S+ 0 0 64 -3,-0.1 2,-0.2 3,-0.0 -1,-0.1 -0.920 71.1 13.4 153.1-123.4 5.6 -17.4 10.6 40 40 A S S >> S- 0 0 74 -2,-0.3 3,-2.2 1,-0.1 4,-0.7 -0.498 78.4-100.2 -88.8 159.5 8.3 -17.7 8.0 41 41 A S H 3> S+ 0 0 82 1,-0.3 4,-1.5 2,-0.2 3,-0.2 0.739 125.8 61.1 -48.3 -22.9 9.5 -15.0 5.6 42 42 A D H 3> S+ 0 0 92 2,-0.2 4,-1.4 1,-0.2 -1,-0.3 0.841 86.2 72.7 -74.2 -34.8 7.3 -16.9 3.1 43 43 A C H <> S+ 0 0 29 -3,-2.2 4,-0.7 1,-0.2 3,-0.4 0.897 107.5 35.0 -45.5 -48.8 4.2 -16.3 5.1 44 44 A W H >X S+ 0 0 10 -4,-0.7 4,-1.8 1,-0.2 3,-1.2 0.914 102.8 72.4 -74.0 -44.8 4.2 -12.7 4.1 45 45 A D H 3< S+ 0 0 83 -4,-1.5 4,-0.4 1,-0.3 -1,-0.2 0.772 101.6 48.9 -40.7 -29.4 5.6 -13.3 0.6 46 46 A K H >X S+ 0 0 90 -4,-1.4 4,-0.9 -3,-0.4 3,-0.9 0.853 102.5 59.3 -80.9 -37.8 2.1 -14.7 -0.0 47 47 A I H X< S+ 0 0 0 -3,-1.2 3,-0.6 -4,-0.7 4,-0.3 0.885 100.0 57.3 -58.1 -40.5 0.3 -11.7 1.5 48 48 A A G >< S+ 0 0 14 -4,-1.8 3,-1.3 1,-0.2 -1,-0.3 0.782 94.8 68.8 -61.7 -26.9 1.9 -9.4 -1.1 49 49 A R G <4 S+ 0 0 198 -3,-0.9 -1,-0.2 -4,-0.4 -2,-0.2 0.925 95.3 51.7 -58.1 -47.4 0.4 -11.6 -3.8 50 50 A C G << S+ 0 0 43 -4,-0.9 -1,-0.3 -3,-0.6 -2,-0.2 0.553 105.0 68.1 -67.5 -5.9 -3.1 -10.4 -3.0 51 51 A V < + 0 0 3 -3,-1.3 -1,-0.2 -4,-0.3 8,-0.1 -0.809 57.1 177.5-120.2 90.3 -1.7 -6.9 -3.3 52 52 A P S S+ 0 0 117 0, 0.0 -1,-0.1 0, 0.0 -3,-0.1 0.424 86.4 47.5 -69.8 3.1 -0.7 -6.1 -6.9 53 53 A S S S+ 0 0 53 1,-0.2 2,-0.2 -5,-0.1 -2,-0.1 0.766 110.9 44.1-109.5 -47.0 0.2 -2.6 -5.7 54 54 A K S S- 0 0 10 -6,-0.1 2,-0.2 2,-0.0 -3,-0.2 -0.648 75.2-132.5-101.2 159.3 2.3 -3.3 -2.5 55 55 A S > - 0 0 76 -2,-0.2 4,-2.6 -3,-0.1 3,-0.4 -0.627 32.5 -96.2-107.1 167.1 5.1 -5.8 -2.0 56 56 A K H > S+ 0 0 48 1,-0.3 4,-1.9 2,-0.2 5,-0.2 0.915 125.9 51.6 -44.3 -54.8 5.8 -8.3 0.8 57 57 A E H > S+ 0 0 152 1,-0.3 4,-1.9 2,-0.2 -1,-0.3 0.896 111.2 48.0 -51.1 -44.7 8.2 -5.9 2.4 58 58 A D H > S+ 0 0 72 -3,-0.4 4,-1.3 1,-0.2 -1,-0.3 0.870 104.8 60.1 -65.3 -37.5 5.5 -3.2 2.3 59 59 A C H X S+ 0 0 0 -4,-2.6 4,-1.6 1,-0.2 -1,-0.2 0.896 108.5 43.7 -57.5 -42.4 2.9 -5.6 3.7 60 60 A I H X S+ 0 0 34 -4,-1.9 4,-1.5 1,-0.2 -1,-0.2 0.895 109.6 55.1 -70.6 -41.3 5.0 -6.0 6.8 61 61 A A H < S+ 0 0 41 -4,-1.9 4,-0.4 1,-0.2 -1,-0.2 0.718 111.6 47.0 -64.4 -20.3 5.8 -2.3 7.1 62 62 A R H >X S+ 0 0 66 -4,-1.3 4,-2.0 -3,-0.2 3,-0.5 0.792 100.8 64.3 -90.0 -33.3 2.0 -1.7 7.1 63 63 A Y H 3X S+ 0 0 77 -4,-1.6 4,-2.9 1,-0.2 5,-0.4 0.919 92.4 63.6 -56.2 -46.8 1.2 -4.4 9.6 64 64 A K H 3X S+ 0 0 130 -4,-1.5 4,-1.4 1,-0.3 -1,-0.2 0.879 108.7 41.4 -44.9 -45.4 3.0 -2.5 12.3 65 65 A L H <4 S+ 0 0 98 -3,-0.5 -1,-0.3 -4,-0.4 -2,-0.2 0.891 110.4 57.0 -71.7 -40.9 0.5 0.3 11.9 66 66 A L H < S+ 0 0 57 -4,-2.0 3,-0.4 1,-0.2 -2,-0.2 0.883 118.7 32.8 -57.6 -40.1 -2.4 -2.0 11.6 67 67 A V H < S+ 0 0 81 -4,-2.9 -1,-0.2 1,-0.2 -2,-0.2 0.667 112.8 64.2 -89.6 -20.0 -1.6 -3.5 15.0 68 68 A S S < S+ 0 0 100 -4,-1.4 -1,-0.2 -5,-0.4 -2,-0.1 -0.200 91.3 87.0 -96.8 41.5 -0.2 -0.3 16.4 69 69 A G S S- 0 0 36 -3,-0.4 2,-0.1 -2,-0.1 -4,-0.0 -1.000 77.8-110.7-144.5 143.3 -3.6 1.5 16.2 70 70 A P - 0 0 131 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 -0.356 31.5-176.4 -69.7 148.1 -6.7 1.8 18.5 71 71 A S - 0 0 111 -2,-0.1 2,-0.3 0, 0.0 -2,-0.0 -0.898 22.3-132.3-152.3 117.4 -9.9 0.1 17.5 72 72 A S 0 0 126 -2,-0.3 0, 0.0 1,-0.2 0, 0.0 -0.504 360.0 360.0 -71.1 130.0 -13.3 0.3 19.3 73 73 A G 0 0 128 -2,-0.3 -1,-0.2 0, 0.0 0, 0.0 0.915 360.0 360.0 48.2 360.0 -14.9 -3.1 19.8