==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION REGULATION 12-MAY-93 1CSQ . COMPND 2 MOLECULE: COLD SHOCK PROTEIN B(CSPB); . SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; . AUTHOR H.SCHINDELIN,U.HEINEMANN . 67 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4550.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 58.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 32.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 10.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 139 0, 0.0 2,-0.3 0, 0.0 49,-0.2 0.000 360.0 360.0 360.0-173.8 36.4 45.0 8.3 2 2 A L - 0 0 63 47,-0.3 47,-1.3 48,-0.1 2,-0.3 -0.969 360.0-120.4-149.7 158.4 35.2 41.8 10.3 3 3 A E E +A 48 0A 83 -2,-0.3 2,-0.3 45,-0.2 18,-0.3 -0.744 43.6 142.3-102.5 149.9 35.4 40.8 14.1 4 4 A G E -A 47 0A 13 43,-1.3 43,-1.0 -2,-0.3 2,-0.4 -0.984 40.9-133.0-169.9 166.1 37.2 37.7 15.3 5 5 A K E -AB 46 19A 136 14,-1.3 14,-1.5 -2,-0.3 2,-0.6 -0.948 41.2-104.0-123.7 155.0 39.3 36.2 17.9 6 6 A V E - B 0 18A 3 39,-2.3 38,-3.3 -2,-0.4 12,-0.3 -0.712 22.6-156.3 -88.9 119.3 42.4 34.3 17.0 7 7 A K E - 0 0 96 10,-1.4 2,-0.3 -2,-0.6 11,-0.2 0.937 70.0 -38.9 -54.4 -56.8 41.8 30.5 17.4 8 8 A W E - B 0 17A 96 9,-1.4 9,-3.3 35,-0.1 2,-0.3 -0.924 56.4-155.4-163.8 164.1 45.6 29.7 17.7 9 9 A F E - B 0 16A 23 7,-0.3 2,-1.1 -2,-0.3 7,-0.3 -0.990 19.7-134.1-145.5 142.8 48.8 31.0 16.2 10 10 A N E >> - B 0 15A 51 5,-3.0 4,-2.4 -2,-0.3 5,-0.5 -0.747 24.4-172.3 -99.7 89.7 52.2 29.2 15.8 11 11 A S T 45S+ 0 0 59 -2,-1.1 -1,-0.2 1,-0.2 19,-0.0 0.867 83.8 53.6 -50.9 -36.1 54.4 32.2 17.0 12 12 A E T 45S+ 0 0 152 1,-0.2 -1,-0.2 -3,-0.2 -2,-0.1 0.970 121.4 25.6 -60.9 -68.3 57.3 30.3 16.0 13 13 A K T 45S- 0 0 160 2,-0.1 -1,-0.2 1,-0.0 -2,-0.2 0.509 104.8-129.3 -84.5 -1.6 56.3 29.6 12.3 14 14 A G T <5 + 0 0 4 -4,-2.4 16,-2.6 1,-0.1 2,-0.3 0.842 69.1 95.3 60.8 42.1 54.0 32.7 12.1 15 15 A F E < +BC 10 29A 66 -5,-0.5 -5,-3.0 14,-0.3 2,-0.3 -0.949 36.6 142.1-146.3 165.1 50.6 31.4 10.8 16 16 A G E -BC 9 28A 0 12,-1.8 12,-1.0 -2,-0.3 2,-0.3 -0.832 42.9 -83.5-177.2-154.8 47.5 30.4 12.8 17 17 A F E -BC 8 27A 61 -9,-3.3 -10,-1.4 -2,-0.3 -9,-1.4 -0.998 15.1-154.2-148.0 141.1 43.7 30.7 12.6 18 18 A I E -BC 6 26A 0 8,-2.4 8,-2.5 -2,-0.3 2,-0.3 -0.967 21.2-148.7-109.0 118.4 41.0 33.3 13.4 19 19 A E E -B 5 0A 93 -14,-1.5 -14,-1.3 -2,-0.5 2,-0.4 -0.678 11.2-156.6 -92.7 147.8 37.6 31.7 14.0 20 20 A V - 0 0 21 -2,-0.3 2,-0.7 3,-0.3 -16,-0.1 -0.952 24.9-103.9-125.4 144.5 34.7 33.8 13.1 21 21 A E S S- 0 0 107 -2,-0.4 3,-0.1 -18,-0.3 -18,-0.1 -0.593 102.5 -3.7 -70.1 100.7 31.1 33.5 14.5 22 22 A G S S+ 0 0 84 -2,-0.7 -1,-0.2 1,-0.4 2,-0.1 -0.162 122.4 68.7 114.5 -41.2 29.0 31.8 11.9 23 23 A Q S S- 0 0 131 1,-0.1 -1,-0.4 3,-0.0 -3,-0.3 -0.260 92.0 -86.6 -93.8-173.6 31.5 31.4 9.1 24 24 A D - 0 0 143 1,-0.1 -1,-0.1 -3,-0.1 -6,-0.1 -0.694 55.5 -74.0 -96.8 161.7 34.6 29.0 9.1 25 25 A D - 0 0 70 -2,-0.3 2,-0.4 -6,-0.1 -6,-0.2 -0.053 43.3-143.1 -46.8 140.0 38.0 29.7 10.4 26 26 A V E -C 18 0A 9 -8,-2.5 -8,-2.4 -3,-0.1 2,-0.5 -0.922 14.9-124.6-111.1 140.6 40.3 32.1 8.3 27 27 A F E -C 17 0A 72 31,-0.5 33,-1.9 -2,-0.4 2,-0.4 -0.681 25.8-166.3 -83.1 122.5 44.0 31.5 8.0 28 28 A V E -C 16 0A 0 -12,-1.0 -12,-1.8 -2,-0.5 2,-0.3 -0.853 4.1-160.4-103.2 158.5 46.2 34.5 9.0 29 29 A H E > -C 15 0A 54 31,-0.4 3,-2.7 -2,-0.4 4,-0.4 -0.937 35.5-107.9-125.9 149.7 49.9 34.7 8.2 30 30 A F G > S+ 0 0 90 -16,-2.6 3,-3.2 -2,-0.3 -1,-0.1 0.902 115.8 65.4 -49.5 -36.6 52.2 37.0 10.2 31 31 A S G 3 S+ 0 0 67 1,-0.3 -1,-0.3 -17,-0.2 -16,-0.1 0.487 91.1 61.2 -69.2 2.1 52.4 39.3 7.1 32 32 A A G < S+ 0 0 12 -3,-2.7 31,-1.3 29,-0.1 2,-0.5 0.558 80.7 109.2 -97.2 -6.1 48.7 40.2 7.3 33 33 A I E < -d 63 0A 6 -3,-3.2 2,-0.3 -4,-0.4 31,-0.2 -0.518 54.0-163.4 -81.3 117.2 49.3 41.7 10.7 34 34 A Q E +d 64 0A 75 29,-3.1 31,-0.9 -2,-0.5 2,-0.4 -0.681 46.0 70.1 -90.6 148.5 49.1 45.5 10.6 35 35 A G S S- 0 0 45 -2,-0.3 2,-0.3 32,-0.3 4,-0.1 -0.967 82.4 -81.9 148.8-154.7 50.5 47.5 13.4 36 36 A E S S+ 0 0 100 -2,-0.4 2,-0.2 2,-0.1 -2,-0.1 -0.952 85.1 58.2-144.9 138.0 53.9 48.2 14.5 37 37 A G S S- 0 0 65 -2,-0.3 2,-0.1 2,-0.0 0, 0.0 -0.548 102.1 -32.5 121.2 169.7 55.9 45.9 16.7 38 38 A F - 0 0 180 -2,-0.2 2,-1.0 1,-0.1 -2,-0.1 -0.454 69.4-114.7 -67.0 138.2 56.9 42.2 16.1 39 39 A K + 0 0 91 -2,-0.1 2,-0.3 -4,-0.1 -1,-0.1 -0.664 67.6 113.6 -84.7 89.9 54.3 40.4 14.1 40 40 A T - 0 0 25 -2,-1.0 2,-0.4 -10,-0.1 -29,-0.0 -0.970 49.6-140.4-151.5 151.3 52.7 37.7 16.2 41 41 A L - 0 0 5 -2,-0.3 2,-0.3 4,-0.0 -30,-0.1 -0.928 14.7-134.3-119.0 137.2 49.2 37.1 17.7 42 42 A E > - 0 0 120 -2,-0.4 3,-1.4 1,-0.1 -36,-0.2 -0.687 40.1-102.3 -78.1 147.0 48.6 35.7 21.1 43 43 A E T 3 S+ 0 0 145 -2,-0.3 -36,-0.2 1,-0.2 -35,-0.1 -0.428 109.6 35.1 -64.2 150.3 45.8 33.0 20.8 44 44 A G T 3 S+ 0 0 43 -38,-3.3 -1,-0.2 1,-0.3 -37,-0.1 0.268 84.8 138.6 89.9 -19.0 42.5 34.6 22.1 45 45 A Q < - 0 0 46 -3,-1.4 -39,-2.3 -39,-0.1 2,-1.0 -0.339 54.6-122.2 -68.5 152.7 43.1 38.2 20.7 46 46 A A E +A 5 0A 63 -41,-0.3 -41,-0.3 19,-0.1 2,-0.3 -0.735 37.4 176.8-103.2 95.7 40.4 40.1 19.1 47 47 A V E -A 4 0A 3 -2,-1.0 -43,-1.3 -43,-1.0 2,-0.4 -0.640 24.5-150.3 -98.0 152.1 41.2 41.1 15.7 48 48 A S E +AE 3 64A 46 16,-1.1 16,-2.1 -2,-0.3 2,-0.2 -0.965 37.4 153.2-109.1 142.5 39.3 42.9 13.1 49 49 A F E - 0 0 0 -47,-1.3 -47,-0.3 -2,-0.4 2,-0.3 -0.781 38.5-118.0-146.6-165.0 40.4 41.9 9.6 50 50 A E E - E 0 61A 84 11,-2.9 11,-3.4 -2,-0.2 2,-0.5 -0.924 25.3-127.1-138.7 156.1 39.5 41.5 5.9 51 51 A I E - E 0 60A 69 -2,-0.3 2,-0.4 9,-0.3 9,-0.2 -0.965 23.6-173.9-117.2 138.3 39.5 38.4 3.9 52 52 A V E - E 0 59A 73 7,-2.9 7,-2.8 -2,-0.5 2,-0.4 -0.929 5.1-179.8-125.9 136.1 41.3 38.2 0.7 53 53 A E + 0 0 137 -2,-0.4 2,-0.2 5,-0.3 -2,-0.0 -0.993 17.4 142.6-148.6 150.3 41.2 35.4 -1.8 54 54 A G S > S- 0 0 50 3,-0.5 3,-1.8 -2,-0.4 -2,-0.0 -0.497 77.9 -38.7-145.5-151.2 42.7 34.4 -5.1 55 55 A N T 3 S+ 0 0 171 1,-0.3 -2,-0.0 -2,-0.2 0, 0.0 0.856 134.0 57.4 -61.8 -34.8 43.8 31.0 -6.3 56 56 A R T 3 S- 0 0 231 1,-0.2 -1,-0.3 3,-0.0 -3,-0.0 0.599 115.3-113.8 -71.5 0.5 45.3 29.9 -2.9 57 57 A G < - 0 0 19 -3,-1.8 -3,-0.5 2,-0.1 -1,-0.2 -0.337 51.4 -29.0 99.2 169.6 41.9 30.5 -1.2 58 58 A P + 0 0 69 0, 0.0 -31,-0.5 0, 0.0 2,-0.3 -0.517 63.5 167.5 -64.9 140.4 40.5 33.0 1.3 59 59 A Q E - E 0 52A 78 -7,-2.8 -7,-2.9 -2,-0.2 -31,-0.2 -0.967 36.3 -97.3-155.0 143.8 43.1 34.2 3.8 60 60 A A E + E 0 51A 3 -33,-1.9 -31,-0.4 -2,-0.3 2,-0.3 -0.341 39.0 177.6 -73.8 148.7 43.0 37.1 6.3 61 61 A A E + E 0 50A 15 -11,-3.4 -11,-2.9 1,-0.1 3,-0.2 -0.890 57.0 31.2-140.4 165.1 44.4 40.5 5.7 62 62 A N E - 0 0 58 -2,-0.3 2,-0.6 1,-0.2 -29,-0.2 0.721 69.3-178.7 54.3 34.6 44.5 43.8 7.5 63 63 A V E -d 33 0A 0 -31,-1.3 -29,-3.1 -3,-0.1 2,-0.8 -0.470 8.4-166.3 -66.9 105.5 44.6 42.0 10.8 64 64 A T E -dE 34 48A 36 -16,-2.1 -16,-1.1 -2,-0.6 -29,-0.1 -0.895 12.7-168.1 -97.9 106.6 44.8 44.9 13.2 65 65 A K S S- 0 0 54 -31,-0.9 -1,-0.2 -2,-0.8 -19,-0.1 0.943 76.6 -70.2 -53.5 -46.8 45.7 43.3 16.5 66 66 A E 0 0 93 -32,-0.3 -1,-0.1 -3,-0.1 -31,-0.1 0.193 360.0 360.0 147.6 77.3 44.7 46.7 17.6 67 67 A A 0 0 94 -33,-0.1 -32,-0.3 -32,-0.0 -3,-0.1 -0.336 360.0 360.0-173.0 360.0 47.2 49.1 16.4