==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT(HEME PROTEIN) 04-OCT-94 1CSV . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR T.P.LO,G.D.BRAYER . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6451.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 64 59.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 12.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 34 31.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A T 0 0 133 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -75.2 4.1 10.6 -8.1 2 -4 A E + 0 0 150 2,-0.0 2,-0.5 0, 0.0 0, 0.0 0.082 360.0 101.2-119.6 9.7 0.8 11.6 -6.6 3 -3 A F - 0 0 31 97,-0.0 2,-0.4 94,-0.0 64,-0.1 -0.931 49.0-176.8-107.9 130.8 2.2 15.1 -5.7 4 -2 A K - 0 0 131 -2,-0.5 2,-0.2 -3,-0.0 97,-0.2 -0.963 25.1-120.9-128.9 134.4 1.3 18.1 -7.9 5 -1 A A + 0 0 81 -2,-0.4 2,-0.2 95,-0.1 93,-0.1 -0.516 37.9 161.5 -78.6 142.9 2.5 21.6 -7.6 6 1 A G - 0 0 40 91,-0.4 2,-0.5 -2,-0.2 -1,-0.1 -0.158 50.5 -26.3-125.3-142.1 -0.1 24.3 -7.1 7 2 A S > - 0 0 50 -2,-0.2 4,-3.0 1,-0.1 95,-0.3 -0.777 32.8-167.2-102.4 120.7 0.4 27.8 -5.8 8 3 A A H > S+ 0 0 36 -2,-0.5 4,-1.2 1,-0.2 -1,-0.1 0.715 96.3 52.0 -65.7 -30.2 3.1 29.0 -3.4 9 4 A K H > S+ 0 0 177 2,-0.2 4,-1.3 1,-0.1 -1,-0.2 0.867 111.8 46.7 -79.4 -33.8 1.2 32.2 -2.8 10 5 A K H >> S+ 0 0 94 1,-0.2 4,-1.3 2,-0.2 3,-0.5 0.929 115.0 47.1 -65.9 -48.6 -1.9 30.3 -2.0 11 6 A G H 3X S+ 0 0 0 -4,-3.0 4,-1.8 87,-0.4 -1,-0.2 0.759 103.2 62.4 -63.2 -30.8 0.2 28.0 0.3 12 7 A A H 3X S+ 0 0 17 -4,-1.2 4,-1.6 1,-0.2 -1,-0.3 0.914 109.7 42.2 -62.6 -42.7 1.9 30.9 1.9 13 8 A T H S+ 0 0 5 -4,-1.8 4,-3.9 2,-0.2 5,-2.5 0.943 110.8 47.0 -63.3 -50.6 0.3 28.4 6.3 16 11 A K H <5S+ 0 0 117 -4,-1.6 5,-0.2 1,-0.2 -2,-0.2 0.943 119.4 39.2 -58.9 -47.1 -0.3 31.8 7.9 17 12 A T H <5S+ 0 0 111 -4,-2.0 -1,-0.2 1,-0.1 -2,-0.2 0.684 134.5 19.6 -79.2 -18.7 -4.0 31.0 8.6 18 13 A R H <5S+ 0 0 121 -4,-1.7 -3,-0.2 -5,-0.1 -2,-0.2 0.566 133.1 24.4-127.2 -17.0 -3.4 27.4 9.7 19 14 A C T >X5S+ 0 0 21 -4,-3.9 3,-1.6 -5,-0.3 4,-0.6 0.712 98.3 78.2-121.9 -29.0 0.2 26.6 10.7 20 15 A L T 34 S- 0 0 99 1,-0.1 3,-1.9 12,-0.1 12,-0.4 -0.284 77.2-109.1 -67.8 145.9 12.6 30.5 8.6 27 22 A K T 3 S+ 0 0 165 1,-0.3 -1,-0.1 10,-0.1 -2,-0.1 -0.654 115.7 23.2 -69.7 120.9 16.2 29.4 9.1 28 23 A G T 3 S+ 0 0 78 1,-0.4 -1,-0.3 -2,-0.4 -2,-0.1 0.386 96.6 135.1 92.3 -6.7 17.0 30.9 12.5 29 24 A G < - 0 0 9 -3,-1.9 -1,-0.4 1,-0.1 7,-0.2 -0.494 53.4-118.1 -77.9 145.7 13.3 30.9 13.3 30 25 A P - 0 0 76 0, 0.0 -6,-0.3 0, 0.0 2,-0.2 -0.337 15.9-104.7 -86.7 166.4 12.4 29.5 16.7 31 26 A H + 0 0 62 5,-0.1 2,-0.2 4,-0.1 -8,-0.1 -0.561 41.9 164.6 -84.5 148.7 10.4 26.6 18.1 32 27 A K S S- 0 0 86 2,-4.0 -10,-0.1 -10,-0.4 -9,-0.1 -0.234 73.2 -35.0-136.6-135.4 7.0 27.5 19.5 33 28 A V S S+ 0 0 104 -12,-0.3 -10,-0.1 -2,-0.2 -11,-0.1 0.960 143.0 39.1 -51.2 -48.6 4.2 24.9 20.2 34 29 A G S S- 0 0 5 -12,-2.3 -2,-4.0 1,-0.1 -10,-0.1 -0.496 102.7 -97.6 -96.3 160.0 5.6 23.3 17.2 35 30 A P - 0 0 16 0, 0.0 -11,-0.2 0, 0.0 -4,-0.1 -0.436 46.6 -91.8 -81.2 154.8 9.2 23.0 16.1 36 31 A N - 0 0 15 -7,-0.2 -11,-0.2 -13,-0.2 -5,-0.1 -0.426 36.6-146.5 -62.1 145.0 10.8 25.4 13.6 37 32 A L > + 0 0 24 -13,-3.2 3,-1.6 -2,-0.1 4,-0.2 0.325 47.9 134.4-100.3 10.2 10.2 23.8 10.1 38 33 A H T 3 S+ 0 0 36 -12,-0.4 70,-0.2 1,-0.3 -12,-0.1 -0.387 79.8 4.0 -64.2 132.3 13.4 24.9 8.3 39 34 A G T 3 S+ 0 0 27 68,-2.9 4,-0.3 -14,-0.2 -1,-0.3 0.572 84.7 140.4 69.6 20.0 15.1 22.1 6.4 40 35 A I < + 0 0 13 -3,-1.6 3,-0.4 2,-0.1 24,-0.4 0.689 44.4 84.5 -60.9 -32.3 12.3 19.5 7.2 41 36 A F S S+ 0 0 14 1,-0.2 24,-0.3 -4,-0.2 3,-0.1 -0.542 99.9 22.2 -74.3 148.0 12.2 17.8 3.8 42 37 A G S S+ 0 0 56 22,-4.9 -1,-0.2 1,-0.3 -2,-0.1 -0.054 110.0 110.8 83.9 -31.6 14.9 15.2 3.5 43 38 A R - 0 0 59 -3,-0.4 21,-4.2 -4,-0.3 -1,-0.3 -0.317 67.0-131.6 -75.0 148.8 14.7 15.2 7.3 44 39 A H B -A 63 0A 77 19,-0.3 3,-0.5 -3,-0.1 19,-0.3 -0.761 38.9 -88.7 -97.7 151.3 13.3 12.5 9.5 45 40 A S S S+ 0 0 2 17,-2.3 -1,-0.1 -2,-0.3 16,-0.1 -0.078 104.1 25.7 -57.5 151.1 10.8 13.3 12.3 46 41 A G S S+ 0 0 14 1,-0.1 -1,-0.2 14,-0.0 7,-0.1 0.838 86.0 109.7 66.9 36.0 12.0 14.2 15.8 47 42 A Q + 0 0 134 -3,-0.5 2,-0.3 2,-0.1 -2,-0.1 0.436 36.6 115.5-124.8 9.6 15.4 15.6 14.9 48 43 A A > - 0 0 15 1,-0.1 3,-1.1 2,-0.0 2,-0.2 -0.589 68.2-117.3 -80.1 136.3 15.1 19.3 15.5 49 44 A E T 3 S+ 0 0 178 -2,-0.3 3,-0.1 1,-0.2 -1,-0.1 -0.547 91.4 18.9 -79.6 139.0 17.4 20.5 18.2 50 45 A G T 3 S+ 0 0 83 1,-0.2 2,-0.5 -2,-0.2 -1,-0.2 0.473 99.6 120.2 79.9 11.5 16.1 22.0 21.4 51 46 A Y < - 0 0 41 -3,-1.1 2,-0.9 -15,-0.0 -1,-0.2 -0.932 56.0-148.1-117.8 132.9 12.7 20.5 20.7 52 47 A S - 0 0 92 -2,-0.5 2,-0.3 -3,-0.1 -3,-0.1 -0.812 23.8-177.7-101.7 100.8 10.8 18.0 22.8 53 48 A Y - 0 0 31 -2,-0.9 30,-0.0 1,-0.2 -19,-0.0 -0.696 30.7-100.4 -94.8 148.2 8.8 15.8 20.6 54 49 A T > - 0 0 35 -2,-0.3 4,-1.4 1,-0.1 -1,-0.2 0.158 33.8-107.4 -53.8 173.3 6.4 13.0 21.8 55 50 A D H > S+ 0 0 133 27,-0.2 4,-2.0 2,-0.2 5,-0.2 0.848 120.1 62.7 -75.4 -33.3 7.5 9.4 21.8 56 51 A A H > S+ 0 0 23 26,-0.3 4,-0.6 2,-0.2 -1,-0.2 0.859 104.2 41.9 -57.1 -54.8 5.1 9.1 18.8 57 52 A N H >> S+ 0 0 16 1,-0.2 3,-1.1 2,-0.2 4,-1.0 0.938 114.1 54.0 -60.5 -52.4 6.9 11.5 16.5 58 53 A I H >< S+ 0 0 74 -4,-1.4 3,-0.6 1,-0.3 -2,-0.2 0.827 110.4 41.1 -43.7 -60.7 10.3 10.1 17.4 59 54 A K H 3< S+ 0 0 172 -4,-2.0 -1,-0.3 1,-0.2 -2,-0.2 0.461 99.4 73.0 -75.3 -9.2 9.8 6.5 16.7 60 55 A K H << S- 0 0 95 -3,-1.1 -1,-0.2 -4,-0.6 -2,-0.2 0.886 76.3-169.4 -74.6 -31.2 7.8 7.1 13.5 61 56 A N << - 0 0 82 -4,-1.0 2,-0.2 -3,-0.6 -3,-0.1 0.852 14.4-177.7 41.6 45.5 11.2 8.0 12.0 62 57 A V - 0 0 10 -5,-0.4 -17,-2.3 1,-0.1 2,-0.6 -0.512 25.7-132.6 -72.4 137.0 9.3 9.3 9.0 63 58 A L B -A 44 0A 61 -19,-0.3 2,-0.7 -2,-0.2 -19,-0.3 -0.838 24.3-130.3 -94.8 115.3 11.5 10.7 6.2 64 59 A W + 0 0 10 -21,-4.2 -22,-4.9 -2,-0.6 2,-0.3 -0.640 47.5 144.2 -82.7 117.0 10.0 14.0 5.2 65 60 A D >> - 0 0 58 -2,-0.7 4,-1.8 -24,-0.3 3,-0.8 -0.866 64.2 -97.4-139.9 154.5 9.5 14.2 1.4 66 61 A E T 34 S+ 0 0 61 -2,-0.3 4,-0.3 1,-0.2 34,-0.1 0.701 120.9 53.5 -53.3 -34.2 6.5 15.9 -0.3 67 62 A N T 3> S+ 0 0 63 1,-0.2 4,-0.9 2,-0.2 -1,-0.2 0.769 110.9 46.9 -68.2 -38.0 4.5 12.7 -0.8 68 63 A N H <> S+ 0 0 34 -3,-0.8 4,-2.1 2,-0.2 3,-0.2 0.860 104.8 58.2 -70.4 -47.5 4.7 11.8 2.9 69 64 A M H X S+ 0 0 13 -4,-1.8 4,-1.7 1,-0.2 -1,-0.2 0.637 102.5 58.8 -62.4 -18.5 3.8 15.3 4.1 70 65 A S H > S+ 0 0 15 -4,-0.3 4,-0.8 -5,-0.2 -1,-0.2 0.866 104.1 46.9 -81.2 -41.5 0.6 14.9 2.1 71 66 A E H >X S+ 0 0 123 -4,-0.9 4,-1.3 -3,-0.2 3,-1.1 0.964 116.0 47.3 -63.5 -49.9 -0.6 11.8 4.0 72 67 A Y H >< S+ 0 0 21 -4,-2.1 3,-0.5 1,-0.3 7,-0.2 0.910 106.0 57.4 -54.8 -48.3 0.3 13.5 7.3 73 68 A L H 3< S+ 0 0 12 -4,-1.7 17,-3.5 1,-0.3 -1,-0.3 0.673 102.6 56.1 -63.0 -17.7 -1.5 16.8 6.3 74 69 A T H << S- 0 0 35 -3,-1.1 -1,-0.3 -4,-0.8 -2,-0.2 0.894 135.4 -9.5 -78.2 -44.9 -4.7 14.9 5.8 75 70 A N S+ 0 0 0 0, 0.0 4,-3.0 0, 0.0 7,-0.2 0.852 87.2 49.5 -57.6 -42.2 -1.7 13.8 11.5 77 72 A X H 4 S+ 0 0 158 10,-0.3 6,-0.2 2,-0.2 5,-0.1 0.841 114.6 44.2 -68.4 -33.1 -3.1 11.8 14.4 78 73 A K H 4 S+ 0 0 162 1,-0.2 -1,-0.2 -6,-0.2 -6,-0.1 0.900 117.9 46.7 -74.5 -40.3 -4.2 9.0 12.2 79 74 A Y H < S+ 0 0 23 -4,-3.2 -2,-0.2 1,-0.3 -1,-0.2 0.857 131.2 18.5 -71.4 -36.3 -0.8 9.2 10.5 80 75 A I S >< S- 0 0 2 -4,-3.0 3,-1.8 -5,-0.2 -1,-0.3 -0.822 82.5-153.0-140.1 85.2 1.1 9.4 13.8 81 76 A P T 3 S+ 0 0 94 0, 0.0 -3,-0.1 0, 0.0 3,-0.1 -0.385 82.4 29.4 -62.9 131.0 -1.0 8.1 16.6 82 77 A G T 3 S+ 0 0 60 1,-0.3 -26,-0.3 -2,-0.1 -27,-0.2 0.269 85.0 138.0 101.5 -12.9 0.1 9.7 19.9 83 78 A T < - 0 0 7 -3,-1.8 -1,-0.3 -6,-0.2 -3,-0.1 -0.439 50.4-145.6 -64.8 140.6 1.3 13.0 18.3 84 79 A K + 0 0 106 -3,-0.1 2,-0.4 -2,-0.1 -1,-0.1 0.337 57.5 128.3 -90.6 3.4 0.5 16.2 20.2 85 80 A M - 0 0 40 1,-0.1 2,-0.9 -9,-0.1 -8,-0.1 -0.549 50.7-153.2 -61.9 120.9 0.1 18.1 16.9 86 81 A A + 0 0 93 -2,-0.4 2,-0.5 -10,-0.1 -1,-0.1 -0.494 50.3 119.3 -97.5 61.4 -3.3 19.7 17.3 87 82 A F - 0 0 22 -2,-0.9 -10,-0.3 1,-0.1 3,-0.1 -0.989 52.4-153.1-132.2 126.1 -4.3 20.1 13.6 88 83 A G - 0 0 52 -2,-0.5 -1,-0.1 1,-0.2 -2,-0.0 0.503 48.7-121.4 -74.2 -11.1 -7.4 18.4 12.2 89 84 A G - 0 0 7 -14,-0.1 2,-0.6 1,-0.1 -15,-0.3 -0.003 12.5 -80.1 94.4 165.8 -6.0 18.2 8.7 90 85 A F + 0 0 10 -17,-3.5 6,-0.1 -20,-0.1 -1,-0.1 -0.912 33.0 177.7-107.5 102.8 -6.5 19.1 5.1 91 86 A K + 0 0 137 -2,-0.6 2,-0.6 4,-0.0 -1,-0.1 0.747 62.3 83.0 -83.5 -21.5 -9.0 16.8 3.3 92 87 A K S >> S- 0 0 125 1,-0.1 4,-1.8 -18,-0.0 3,-1.1 -0.756 71.2-149.2 -91.7 119.5 -8.8 18.7 0.0 93 88 A E H 3> S+ 0 0 104 -2,-0.6 4,-2.8 1,-0.3 -1,-0.1 0.752 96.0 59.2 -57.5 -30.6 -5.8 17.6 -2.1 94 89 A K H 3> S+ 0 0 133 2,-0.2 4,-2.8 1,-0.2 -1,-0.3 0.832 104.3 51.4 -68.7 -32.7 -5.5 21.1 -3.6 95 90 A D H <> S+ 0 0 15 -3,-1.1 4,-3.2 2,-0.2 -2,-0.2 0.945 113.6 43.7 -65.4 -51.0 -5.0 22.6 -0.2 96 91 A R H X S+ 0 0 33 -4,-1.8 4,-3.2 2,-0.2 5,-0.3 0.864 113.5 51.4 -62.3 -43.1 -2.3 20.1 0.6 97 92 A N H X S+ 0 0 14 -4,-2.8 4,-2.1 1,-0.2 -91,-0.4 0.974 112.7 46.5 -56.5 -55.6 -0.7 20.6 -2.9 98 93 A D H X S+ 0 0 21 -4,-2.8 4,-1.9 1,-0.2 -87,-0.4 0.876 114.1 46.2 -57.5 -49.9 -0.7 24.3 -2.4 99 94 A L H X S+ 0 0 2 -4,-3.2 4,-3.2 1,-0.2 5,-0.2 0.920 111.9 50.5 -66.9 -35.3 0.8 24.2 1.2 100 95 A I H X S+ 0 0 0 -4,-3.2 4,-3.1 1,-0.2 5,-0.2 0.898 107.7 55.6 -66.0 -29.4 3.5 21.6 0.2 101 96 A T H X S+ 0 0 11 -4,-2.1 4,-1.6 -5,-0.3 -1,-0.2 0.962 111.6 43.2 -64.0 -46.8 4.4 23.9 -2.6 102 97 A Y H X S+ 0 0 45 -4,-1.9 4,-3.5 -95,-0.3 -2,-0.2 0.908 114.3 48.4 -62.3 -50.5 4.8 26.7 -0.2 103 98 A L H X S+ 0 0 8 -4,-3.2 4,-3.2 1,-0.2 -2,-0.2 0.937 107.8 56.1 -57.9 -46.8 6.7 24.6 2.4 104 99 A K H < S+ 0 0 75 -4,-3.1 -1,-0.2 -5,-0.2 -2,-0.2 0.876 116.6 36.3 -55.9 -38.1 9.0 23.2 -0.3 105 100 A K H >< S+ 0 0 157 -4,-1.6 3,-0.7 -5,-0.2 -2,-0.2 0.910 121.4 44.3 -83.0 -43.1 10.0 26.8 -1.3 106 101 A A H 3< S+ 0 0 27 -4,-3.5 -2,-0.2 1,-0.2 -3,-0.2 0.823 110.8 50.9 -71.9 -35.8 10.0 28.4 2.2 107 102 A T T 3< 0 0 0 -4,-3.2 -68,-2.9 -5,-0.2 -1,-0.2 0.291 360.0 360.0 -86.6 5.1 11.8 25.7 4.2 108 103 A E < 0 0 155 -3,-0.7 -1,-0.2 -5,-0.2 -2,-0.2 0.882 360.0 360.0 -94.5 360.0 14.8 25.3 1.9