==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT(HEME PROTEIN) 04-OCT-94 1CSW . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR T.P.LO,G.D.BRAYER . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6529.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 64 59.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A T 0 0 146 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -23.5 3.9 10.8 -8.0 2 -4 A E + 0 0 141 1,-0.0 2,-0.5 2,-0.0 0, 0.0 0.018 360.0 85.9-127.1 25.3 0.7 12.0 -6.3 3 -3 A F - 0 0 18 97,-0.0 2,-0.4 94,-0.0 64,-0.1 -0.981 56.4-171.8-126.8 118.6 1.9 15.5 -5.4 4 -2 A K - 0 0 138 -2,-0.5 97,-0.1 1,-0.0 -2,-0.0 -0.918 30.7-103.8-116.0 140.8 1.4 18.2 -8.1 5 -1 A A + 0 0 84 -2,-0.4 93,-0.2 1,-0.1 2,-0.1 -0.206 45.7 169.6 -61.4 142.6 2.8 21.7 -7.8 6 1 A G - 0 0 35 91,-0.6 2,-0.7 92,-0.2 -1,-0.1 -0.229 43.5 -37.1-126.4-145.0 0.4 24.4 -6.9 7 2 A S > - 0 0 51 1,-0.2 4,-2.8 -2,-0.1 95,-0.3 -0.852 34.2-164.9 -96.5 113.3 0.5 28.1 -5.9 8 3 A A H > S+ 0 0 40 -2,-0.7 4,-2.3 1,-0.2 -1,-0.2 0.828 95.6 52.1 -59.7 -36.7 3.3 29.1 -3.6 9 4 A K H > S+ 0 0 178 2,-0.2 4,-1.4 1,-0.2 -1,-0.2 0.921 111.3 44.8 -65.1 -45.8 1.4 32.4 -2.9 10 5 A K H > S+ 0 0 93 1,-0.2 4,-1.8 2,-0.2 3,-0.3 0.927 114.1 50.9 -61.3 -45.7 -1.8 30.4 -2.0 11 6 A G H X S+ 0 0 0 -4,-2.8 4,-2.1 87,-0.3 -2,-0.2 0.853 102.9 59.8 -61.1 -37.9 0.4 28.1 0.1 12 7 A A H X S+ 0 0 34 -4,-2.3 4,-1.5 1,-0.2 -1,-0.2 0.906 110.0 42.2 -57.7 -46.1 2.0 31.0 1.9 13 8 A T H X S+ 0 0 79 -4,-1.4 4,-2.1 -3,-0.3 -1,-0.2 0.682 108.0 58.4 -75.7 -28.2 -1.4 32.1 3.2 14 9 A L H X S+ 0 0 19 -4,-1.8 4,-2.2 2,-0.2 5,-0.4 0.943 108.3 48.1 -63.1 -46.1 -2.5 28.7 4.0 15 10 A F H X>S+ 0 0 7 -4,-2.1 4,-3.1 2,-0.2 5,-2.1 0.911 109.2 51.8 -56.4 -50.4 0.5 28.5 6.3 16 11 A K H <5S+ 0 0 123 -4,-1.5 4,-0.4 1,-0.2 5,-0.3 0.960 118.7 37.6 -54.8 -52.6 -0.2 31.9 8.0 17 12 A T H <5S+ 0 0 88 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.664 132.5 22.7 -74.7 -24.3 -3.8 30.8 8.7 18 13 A R H <5S+ 0 0 112 -4,-2.2 -3,-0.2 -5,-0.1 -2,-0.2 0.630 132.5 23.0-122.0 -20.2 -3.2 27.1 9.6 19 14 A C T >X5S+ 0 0 22 -4,-3.1 3,-1.3 -5,-0.4 4,-1.2 0.623 97.3 80.6-119.2 -21.3 0.4 26.6 10.7 20 15 A L T 34 S- 0 0 94 1,-0.1 3,-2.2 12,-0.1 12,-0.3 -0.326 79.7-105.2 -74.2 148.2 12.7 30.6 8.4 27 22 A K T 3 S+ 0 0 167 1,-0.3 -1,-0.1 79,-0.2 -2,-0.1 -0.542 114.4 20.2 -63.1 121.8 16.3 29.6 8.8 28 23 A G T 3 S+ 0 0 80 1,-0.3 -1,-0.3 -2,-0.3 -2,-0.1 0.626 93.9 134.1 88.0 9.9 17.1 30.8 12.4 29 24 A G < - 0 0 13 -3,-2.2 -1,-0.3 1,-0.1 7,-0.2 -0.635 55.2-110.7 -90.6 151.4 13.4 31.0 13.4 30 25 A P - 0 0 85 0, 0.0 -6,-0.2 0, 0.0 2,-0.1 -0.495 19.1-105.5 -85.8 165.0 12.6 29.5 16.8 31 26 A H + 0 0 63 -2,-0.2 2,-0.2 5,-0.1 -8,-0.1 -0.447 43.1 171.8 -75.8 150.3 10.7 26.5 17.9 32 27 A K - 0 0 89 2,-3.6 -10,-0.1 -10,-0.5 -1,-0.1 -0.164 69.9 -37.0-129.6-125.4 7.3 27.5 19.3 33 28 A V S S+ 0 0 105 -12,-0.3 -10,-0.1 -2,-0.2 -11,-0.1 0.873 142.6 34.8 -64.7 -36.7 4.6 25.0 20.3 34 29 A G S S- 0 0 6 -12,-2.3 -2,-3.6 1,-0.1 -10,-0.1 -0.745 105.5 -88.0-114.2 162.1 5.9 23.1 17.2 35 30 A P - 0 0 16 0, 0.0 -11,-0.2 0, 0.0 2,-0.2 -0.321 44.3 -99.6 -68.5 152.3 9.4 22.9 15.9 36 31 A N - 0 0 16 -13,-0.2 -11,-0.2 -7,-0.2 -5,-0.1 -0.574 35.7-148.8 -66.0 141.9 10.9 25.4 13.4 37 32 A L > + 0 0 26 -13,-2.6 3,-2.1 -2,-0.2 4,-0.2 0.307 43.7 138.5-101.4 4.7 10.5 23.6 10.0 38 33 A H T 3 S+ 0 0 38 -12,-0.3 70,-0.1 1,-0.3 69,-0.1 -0.295 80.6 7.3 -52.9 137.2 13.5 24.9 8.1 39 34 A G T 3 S+ 0 0 26 68,-3.2 -1,-0.3 -14,-0.2 4,-0.3 0.673 83.5 141.1 60.2 25.5 15.1 22.2 6.1 40 35 A I X + 0 0 11 -3,-2.1 3,-1.6 2,-0.1 24,-0.4 0.828 44.3 91.2 -62.1 -34.8 12.4 19.6 6.9 41 36 A F T 3 S+ 0 0 42 1,-0.3 24,-0.2 -4,-0.2 3,-0.1 -0.538 97.5 14.9 -70.0 126.4 12.4 18.1 3.5 42 37 A G T 3 S+ 0 0 54 22,-3.0 -1,-0.3 1,-0.4 2,-0.2 0.063 106.5 103.5 95.3 -16.1 14.9 15.2 3.3 43 38 A R S < S- 0 0 65 -3,-1.6 21,-2.9 -4,-0.3 -1,-0.4 -0.506 71.0-117.8 -95.9 160.6 15.2 14.9 7.1 44 39 A H B > -A 63 0A 76 19,-0.2 3,-0.7 -2,-0.2 19,-0.2 -0.527 41.2 -86.3 -90.4 165.2 13.6 12.3 9.3 45 40 A S T 3 S+ 0 0 2 17,-1.4 -1,-0.1 1,-0.2 16,-0.1 -0.271 104.6 26.1 -69.8 152.5 11.0 13.1 12.0 46 41 A G T 3 S+ 0 0 14 -2,-0.1 -1,-0.2 1,-0.1 7,-0.2 0.679 86.0 111.4 65.6 26.8 12.0 14.1 15.5 47 42 A Q < + 0 0 122 -3,-0.7 2,-0.5 2,-0.1 -2,-0.1 0.289 32.9 113.8-111.2 10.6 15.5 15.5 14.7 48 43 A A > - 0 0 12 1,-0.0 3,-1.3 3,-0.0 2,-0.2 -0.718 68.6-124.9 -77.0 129.8 15.3 19.3 15.3 49 44 A E T 3 S+ 0 0 189 -2,-0.5 3,-0.1 1,-0.2 -2,-0.1 -0.470 88.3 27.3 -87.0 147.1 17.6 20.0 18.2 50 45 A G T 3 S+ 0 0 81 1,-0.3 2,-0.5 -2,-0.2 -1,-0.2 0.501 97.6 114.9 89.7 7.0 16.3 21.7 21.3 51 46 A Y < - 0 0 43 -3,-1.3 2,-1.3 -5,-0.1 -1,-0.3 -0.929 62.1-141.5-116.5 133.8 12.8 20.4 20.7 52 47 A S - 0 0 94 -2,-0.5 2,-0.1 -3,-0.1 -3,-0.1 -0.641 28.2-176.6 -89.4 86.6 11.0 18.0 22.8 53 48 A Y - 0 0 31 -2,-1.3 2,-0.1 -5,-0.2 30,-0.0 -0.399 29.8-101.4 -76.7 165.6 9.1 15.6 20.4 54 49 A T > - 0 0 31 1,-0.1 4,-1.4 -2,-0.1 -1,-0.1 -0.301 31.7-110.1 -79.1 163.3 6.7 12.9 21.6 55 50 A D H > S+ 0 0 125 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.871 117.9 58.8 -59.1 -40.6 7.9 9.2 21.6 56 51 A A H > S+ 0 0 23 26,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.921 102.3 47.0 -53.9 -58.6 5.5 8.7 18.6 57 52 A N H > S+ 0 0 16 1,-0.2 4,-1.1 2,-0.2 5,-0.4 0.964 115.1 49.4 -53.0 -50.3 6.9 11.3 16.2 58 53 A I H < S+ 0 0 80 -4,-1.4 3,-0.3 1,-0.2 -2,-0.2 0.857 112.7 43.5 -53.2 -51.0 10.4 9.9 16.9 59 54 A K H < S+ 0 0 163 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.661 103.0 65.8 -75.6 -19.0 9.7 6.2 16.5 60 55 A K H < S- 0 0 85 -4,-1.7 -1,-0.2 -3,-0.4 -2,-0.2 0.871 83.7-168.1 -69.7 -34.4 7.6 6.8 13.4 61 56 A N < - 0 0 82 -4,-1.1 2,-0.1 -3,-0.3 -3,-0.1 0.787 10.3-170.9 43.5 49.3 10.9 8.0 11.9 62 57 A V - 0 0 7 -5,-0.4 -17,-1.4 -18,-0.1 2,-0.8 -0.347 21.9-138.7 -68.5 136.8 9.3 9.5 8.8 63 58 A L B -A 44 0A 66 -19,-0.2 2,-0.6 -2,-0.1 -19,-0.2 -0.879 30.0-128.9 -96.3 114.0 11.5 10.7 6.0 64 59 A W + 0 0 12 -21,-2.9 -22,-3.0 -2,-0.8 2,-0.3 -0.575 44.4 148.3 -77.2 121.1 9.9 14.0 5.0 65 60 A D >> - 0 0 58 -2,-0.6 4,-2.4 -24,-0.2 3,-0.9 -0.935 63.3 -95.8-143.4 157.5 9.1 14.4 1.3 66 61 A E H 3> S+ 0 0 63 -2,-0.3 4,-0.8 1,-0.2 34,-0.1 0.772 124.3 49.5 -41.1 -32.9 6.3 16.3 -0.6 67 62 A N H 3> S+ 0 0 46 2,-0.2 4,-0.9 3,-0.1 -1,-0.2 0.830 111.6 40.4 -78.6 -47.1 4.5 12.9 -0.8 68 63 A N H <> S+ 0 0 41 -3,-0.9 4,-4.1 -5,-0.2 5,-0.2 0.808 113.1 58.6 -63.3 -49.3 4.6 11.7 2.9 69 64 A M H X S+ 0 0 14 -4,-2.4 4,-3.0 1,-0.2 -2,-0.2 0.885 101.4 54.6 -55.7 -38.8 3.9 15.2 4.0 70 65 A S H X S+ 0 0 8 -4,-0.8 4,-0.9 -5,-0.3 -1,-0.2 0.920 110.8 44.3 -65.1 -43.9 0.7 15.2 1.9 71 66 A E H >X S+ 0 0 113 -4,-0.9 4,-1.0 2,-0.2 3,-0.9 0.943 113.0 53.4 -66.9 -45.7 -0.6 12.1 3.7 72 67 A Y H >< S+ 0 0 18 -4,-4.1 3,-1.2 1,-0.3 7,-0.3 0.938 107.6 49.8 -56.0 -51.5 0.6 13.6 7.0 73 68 A L H 3< S+ 0 0 13 -4,-3.0 17,-2.6 1,-0.3 -1,-0.3 0.672 99.4 66.9 -62.2 -17.9 -1.4 16.8 6.5 74 69 A T H << S- 0 0 44 -4,-0.9 -1,-0.3 -3,-0.9 -2,-0.2 0.881 133.2 -17.0 -68.5 -39.3 -4.5 14.9 5.6 75 70 A N S+ 0 0 0 0, 0.0 4,-3.3 0, 0.0 7,-0.1 0.831 87.2 52.3 -54.1 -44.1 -1.6 13.8 11.4 77 72 A X H 4 S+ 0 0 142 10,-0.4 6,-0.2 2,-0.2 5,-0.1 0.747 109.9 48.7 -65.7 -32.3 -3.0 11.7 14.2 78 73 A K H 4 S+ 0 0 173 -3,-0.5 -1,-0.2 -6,-0.2 -6,-0.1 0.896 117.3 43.0 -75.5 -37.8 -3.9 8.9 11.9 79 74 A Y H < S+ 0 0 50 -4,-2.4 -2,-0.2 -7,-0.3 -1,-0.2 0.896 131.3 22.2 -72.6 -44.4 -0.4 9.0 10.3 80 75 A I S >< S- 0 0 2 -4,-3.3 3,-2.4 -5,-0.2 -1,-0.3 -0.706 82.9-155.4-127.2 80.7 1.5 9.4 13.7 81 76 A P T 3 S+ 0 0 95 0, 0.0 -3,-0.1 0, 0.0 3,-0.1 -0.303 82.2 27.1 -58.4 127.4 -0.7 8.1 16.5 82 77 A G T 3 S+ 0 0 57 1,-0.3 -26,-0.2 -5,-0.1 -25,-0.2 0.328 84.7 143.3 101.4 -9.8 0.3 9.7 19.8 83 78 A T < - 0 0 6 -3,-2.4 -1,-0.3 -6,-0.2 -3,-0.0 -0.399 48.1-146.6 -62.5 142.4 1.6 12.9 18.1 84 79 A K + 0 0 107 -3,-0.1 2,-0.8 2,-0.1 -1,-0.1 0.347 61.8 122.9 -93.1 8.7 0.8 16.0 20.2 85 80 A M - 0 0 42 1,-0.1 2,-1.3 2,-0.1 -8,-0.1 -0.656 53.2-157.1 -70.6 107.6 0.4 18.0 16.9 86 81 A A + 0 0 87 -2,-0.8 2,-0.5 -10,-0.1 -1,-0.1 -0.480 44.5 126.4 -87.0 60.2 -3.2 19.3 17.5 87 82 A F - 0 0 35 -2,-1.3 -10,-0.4 1,-0.2 3,-0.1 -0.978 51.8-148.4-121.7 133.9 -4.2 19.9 13.9 88 83 A G - 0 0 61 -2,-0.5 2,-0.2 1,-0.2 -11,-0.2 0.941 50.4-105.2 -62.5 -52.6 -7.3 18.4 12.5 89 84 A G - 0 0 11 -14,-0.1 2,-0.6 -13,-0.1 -15,-0.2 -0.664 14.2 -97.4 139.2 165.1 -6.1 18.0 8.9 90 85 A M - 0 0 5 -17,-2.6 6,-0.1 -2,-0.2 -15,-0.0 -0.935 31.9-176.6-118.8 100.5 -6.3 19.5 5.4 91 86 A K + 0 0 139 -2,-0.6 2,-0.4 4,-0.0 -1,-0.1 0.807 57.0 83.1 -76.9 -28.6 -8.8 17.4 3.3 92 87 A K > - 0 0 127 1,-0.2 4,-2.1 2,-0.0 5,-0.1 -0.702 64.3-152.8 -82.0 125.2 -8.5 19.0 -0.1 93 88 A E H > S+ 0 0 94 -2,-0.4 4,-3.3 1,-0.2 5,-0.2 0.869 98.6 56.5 -65.8 -33.8 -5.6 17.8 -2.1 94 89 A K H > S+ 0 0 150 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.886 106.9 48.8 -63.6 -40.7 -5.5 21.2 -3.9 95 90 A D H > S+ 0 0 39 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.913 115.4 45.5 -61.7 -45.9 -5.1 23.0 -0.5 96 91 A R H X S+ 0 0 28 -4,-2.1 4,-2.6 2,-0.2 5,-0.3 0.870 109.6 53.0 -66.0 -40.6 -2.3 20.5 0.4 97 92 A N H X S+ 0 0 15 -4,-3.3 4,-1.6 1,-0.2 -91,-0.6 0.923 111.1 49.2 -59.4 -44.4 -0.6 20.8 -3.1 98 93 A D H X S+ 0 0 23 -4,-2.3 4,-1.6 2,-0.2 -87,-0.3 0.907 113.3 45.0 -60.3 -47.2 -0.6 24.6 -2.5 99 94 A L H X S+ 0 0 2 -4,-2.2 4,-3.3 2,-0.2 3,-0.4 0.938 113.1 47.7 -67.5 -46.2 0.9 24.4 1.0 100 95 A I H X S+ 0 0 0 -4,-2.6 4,-3.5 1,-0.3 -1,-0.2 0.825 108.8 57.5 -63.3 -29.5 3.6 21.8 0.3 101 96 A T H X S+ 0 0 9 -4,-1.6 4,-0.7 -5,-0.3 -1,-0.3 0.887 111.8 40.7 -66.9 -40.2 4.5 24.0 -2.7 102 97 A Y H X S+ 0 0 49 -4,-1.6 4,-3.0 -3,-0.4 3,-0.3 0.884 117.5 48.0 -69.2 -50.1 5.0 26.9 -0.4 103 98 A L H X S+ 0 0 7 -4,-3.3 4,-2.8 1,-0.3 -2,-0.2 0.936 105.2 58.4 -58.4 -51.4 6.8 24.8 2.2 104 99 A K H < S+ 0 0 62 -4,-3.5 -1,-0.3 1,-0.2 -2,-0.2 0.821 115.8 37.4 -50.5 -30.0 9.0 23.2 -0.4 105 100 A K H >< S+ 0 0 154 -4,-0.7 3,-0.6 -3,-0.3 -2,-0.2 0.902 118.4 43.9 -90.5 -39.6 10.2 26.8 -1.2 106 101 A A H 3< S+ 0 0 31 -4,-3.0 -79,-0.2 1,-0.2 -2,-0.2 0.737 109.7 52.7 -84.8 -23.4 10.4 28.5 2.2 107 102 A T T 3< 0 0 1 -4,-2.8 -68,-3.2 -5,-0.2 -1,-0.2 0.278 360.0 360.0 -93.2 9.3 12.0 25.7 4.3 108 103 A E < 0 0 177 -3,-0.6 -1,-0.2 -5,-0.2 -2,-0.2 0.930 360.0 360.0 -86.5 360.0 14.9 25.4 1.8