==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT(HEME PROTEIN) 04-OCT-94 1CSX . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR T.P.LO,G.D.BRAYER . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6509.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 68 63.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 15 13.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 34 31.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A T 0 0 125 0, 0.0 3,-0.1 0, 0.0 65,-0.0 0.000 360.0 360.0 360.0-128.5 4.7 11.5 -7.8 2 -4 A E + 0 0 165 1,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.171 360.0 77.2-145.2 23.5 1.1 11.6 -6.3 3 -3 A F - 0 0 14 94,-0.0 2,-0.4 93,-0.0 64,-0.1 -0.985 64.3-164.1-140.0 132.1 1.7 15.2 -5.6 4 -2 A K - 0 0 161 -2,-0.3 97,-0.1 62,-0.1 0, 0.0 -0.984 31.5 -98.4-131.2 136.9 1.6 18.1 -8.0 5 -1 A A + 0 0 84 -2,-0.4 2,-0.2 1,-0.1 93,-0.2 -0.085 46.9 175.1 -45.9 145.1 2.9 21.6 -7.6 6 1 A G - 0 0 31 91,-0.5 2,-0.6 92,-0.2 92,-0.1 -0.300 43.3 -36.1-132.0-149.6 0.3 24.1 -6.6 7 2 A S > - 0 0 41 1,-0.2 4,-2.8 -2,-0.2 95,-0.3 -0.742 36.8-166.8 -89.0 120.4 0.3 27.8 -5.7 8 3 A A H > S+ 0 0 31 -2,-0.6 4,-2.3 2,-0.2 -1,-0.2 0.888 97.4 45.4 -70.5 -36.1 3.3 29.0 -3.7 9 4 A K H > S+ 0 0 180 2,-0.2 4,-1.6 1,-0.2 5,-0.2 0.955 112.9 50.6 -67.5 -45.4 1.4 32.3 -3.0 10 5 A K H >> S+ 0 0 121 1,-0.2 4,-1.6 2,-0.2 3,-0.5 0.941 111.8 49.1 -55.2 -48.0 -1.8 30.2 -2.1 11 6 A G H 3X S+ 0 0 0 -4,-2.8 4,-3.3 87,-0.4 -1,-0.2 0.825 102.0 60.5 -59.0 -44.0 0.3 28.0 0.2 12 7 A A H 3X S+ 0 0 14 -4,-2.3 4,-1.9 1,-0.2 -1,-0.2 0.870 110.9 42.1 -51.1 -43.4 2.0 30.9 2.0 13 8 A T H S+ 0 0 3 -4,-3.3 4,-3.0 2,-0.2 5,-1.9 0.887 108.3 51.4 -58.2 -46.3 0.4 28.6 6.2 16 11 A K H <5S+ 0 0 127 -4,-1.9 4,-0.3 1,-0.2 5,-0.3 0.956 120.5 34.8 -59.3 -49.5 -0.2 32.0 7.8 17 12 A T H <5S+ 0 0 113 -4,-2.3 -1,-0.2 1,-0.1 -2,-0.2 0.686 133.2 25.8 -79.5 -23.1 -3.8 31.1 8.8 18 13 A R H <5S+ 0 0 117 -4,-2.8 -3,-0.2 -5,-0.2 -2,-0.2 0.645 130.2 23.2-120.8 -10.5 -3.2 27.3 9.5 19 14 A C T >X5S+ 0 0 29 -4,-3.0 3,-1.3 -5,-0.4 4,-1.0 0.736 98.4 75.2-126.3 -25.0 0.4 26.7 10.6 20 15 A L T 34 S- 0 0 88 1,-0.1 3,-1.9 12,-0.1 12,-0.4 -0.254 80.3 -99.2 -80.7 152.9 13.0 30.3 8.2 27 22 A K T 3 S+ 0 0 170 1,-0.3 -1,-0.1 10,-0.1 -2,-0.1 -0.555 115.3 16.8 -64.1 128.4 16.6 29.3 8.9 28 23 A G T 3 S+ 0 0 81 1,-0.3 -1,-0.3 -2,-0.2 -2,-0.1 0.606 94.7 134.6 83.3 10.6 17.3 30.5 12.4 29 24 A G < - 0 0 16 -3,-1.9 -1,-0.3 1,-0.1 7,-0.2 -0.612 56.0-100.1 -90.1 160.9 13.7 31.0 13.3 30 25 A P - 0 0 86 0, 0.0 -6,-0.3 0, 0.0 2,-0.2 -0.358 18.8-113.3 -88.4 160.1 12.5 29.7 16.6 31 26 A H + 0 0 59 -2,-0.1 2,-0.1 5,-0.1 -8,-0.1 -0.626 41.9 169.2 -76.5 142.8 10.8 26.6 17.9 32 27 A K - 0 0 90 2,-3.6 -10,-0.1 -10,-0.6 -9,-0.1 0.061 69.2 -34.8-126.3-123.1 7.3 27.6 19.2 33 28 A V S S+ 0 0 103 -12,-0.3 -10,-0.1 -2,-0.1 -11,-0.1 0.893 142.4 30.1 -63.2 -46.0 4.5 25.0 20.2 34 29 A G S S- 0 0 5 -12,-2.1 -2,-3.6 1,-0.1 -10,-0.1 -0.605 106.5 -83.4-104.6 171.1 5.9 23.1 17.2 35 30 A P - 0 0 15 0, 0.0 2,-0.3 0, 0.0 -11,-0.2 -0.366 45.9 -98.6 -70.2 156.4 9.4 22.9 15.8 36 31 A N - 0 0 15 -7,-0.2 -11,-0.2 -13,-0.2 -5,-0.1 -0.637 35.1-145.6 -72.0 133.9 10.9 25.4 13.4 37 32 A L > + 0 0 30 -13,-2.8 3,-2.2 -2,-0.3 -12,-0.2 0.293 44.8 140.9 -89.4 7.8 10.5 23.7 10.0 38 33 A H T 3 S+ 0 0 32 -12,-0.4 70,-0.1 1,-0.3 69,-0.1 -0.304 78.9 1.9 -56.1 140.2 13.6 24.9 8.1 39 34 A G T 3 S+ 0 0 28 68,-2.5 -1,-0.3 -14,-0.2 4,-0.3 0.468 82.2 144.5 57.1 20.2 15.2 22.2 6.0 40 35 A I X + 0 0 13 -3,-2.2 3,-0.9 2,-0.1 24,-0.4 0.682 40.2 97.2 -56.3 -22.2 12.5 19.6 6.9 41 36 A F T 3 S+ 0 0 40 1,-0.2 24,-0.2 62,-0.1 3,-0.1 -0.489 98.4 8.2 -75.5 137.6 12.6 17.9 3.3 42 37 A G T 3 S+ 0 0 51 22,-3.0 -1,-0.2 1,-0.3 23,-0.1 0.226 109.1 115.0 81.2 -19.0 14.8 14.8 3.1 43 38 A R < - 0 0 62 -3,-0.9 21,-2.9 21,-0.3 -1,-0.3 -0.428 68.8-123.5 -78.4 155.5 15.1 15.2 6.9 44 39 A H B > -A 63 0A 78 19,-0.2 3,-0.7 -3,-0.1 19,-0.3 -0.688 36.9 -90.1 -96.2 159.7 13.6 12.4 9.1 45 40 A S T 3 S+ 0 0 1 17,-2.3 16,-0.2 -2,-0.3 -1,-0.1 -0.390 105.1 27.9 -71.1 143.7 11.0 13.3 11.8 46 41 A G T 3 S+ 0 0 11 -2,-0.1 -1,-0.2 14,-0.1 7,-0.2 0.639 87.6 107.4 79.9 26.9 12.1 14.2 15.3 47 42 A Q < + 0 0 120 -3,-0.7 2,-0.2 2,-0.1 -2,-0.1 0.387 33.6 109.3-115.7 3.3 15.6 15.6 14.5 48 43 A A S > S- 0 0 17 1,-0.1 3,-0.7 3,-0.0 2,-0.3 -0.652 70.9-124.7 -72.0 139.6 15.5 19.4 14.9 49 44 A E T 3 S+ 0 0 188 -2,-0.2 3,-0.1 1,-0.2 -2,-0.1 -0.610 86.7 34.0 -93.2 156.9 17.6 20.1 18.1 50 45 A G T 3 S+ 0 0 83 -2,-0.3 2,-0.5 1,-0.2 -1,-0.2 0.455 95.9 108.7 89.5 0.9 16.4 21.9 21.1 51 46 A Y < - 0 0 42 -3,-0.7 2,-1.3 -5,-0.1 -1,-0.2 -0.953 64.0-139.7-118.5 129.9 12.8 20.6 20.6 52 47 A S - 0 0 92 -2,-0.5 -3,-0.1 -3,-0.1 2,-0.0 -0.571 27.5-177.7 -82.9 85.8 11.0 18.0 22.7 53 48 A Y - 0 0 32 -2,-1.3 30,-0.0 -7,-0.2 2,-0.0 -0.337 31.9 -98.1 -79.1 172.4 9.0 15.8 20.3 54 49 A T > - 0 0 29 1,-0.1 4,-1.4 -2,-0.0 -1,-0.1 -0.313 32.7-106.6 -82.0 172.1 6.8 12.9 21.5 55 50 A D H > S+ 0 0 131 1,-0.2 4,-1.9 2,-0.2 5,-0.1 0.864 119.8 52.0 -63.5 -38.7 7.9 9.3 21.7 56 51 A A H > S+ 0 0 26 26,-0.3 4,-1.2 2,-0.2 -1,-0.2 0.873 105.4 48.4 -64.5 -50.4 5.6 8.6 18.6 57 52 A N H >> S+ 0 0 17 1,-0.2 3,-1.4 25,-0.2 4,-0.7 0.989 116.5 47.3 -55.7 -54.9 6.8 11.3 16.2 58 53 A I H >< S+ 0 0 69 -4,-1.4 3,-0.5 1,-0.3 -2,-0.2 0.780 112.3 47.1 -48.9 -49.4 10.4 10.2 17.0 59 54 A K H 3< S+ 0 0 170 -4,-1.9 -1,-0.3 1,-0.2 -2,-0.2 0.548 97.4 70.4 -76.1 -13.1 9.8 6.5 16.5 60 55 A K H << S- 0 0 87 -3,-1.4 -1,-0.2 -4,-1.2 -2,-0.2 0.749 82.5-160.8 -78.3 -18.5 7.9 6.9 13.3 61 56 A N << - 0 0 78 -4,-0.7 -3,-0.1 -3,-0.5 -2,-0.1 0.709 16.3-173.9 38.5 40.4 11.2 7.8 11.7 62 57 A V - 0 0 8 -5,-0.4 -17,-2.3 -18,-0.1 2,-0.7 -0.293 23.9-141.9 -62.8 130.0 9.5 9.5 8.7 63 58 A L B -A 44 0A 65 -19,-0.3 2,-0.9 -2,-0.1 -19,-0.2 -0.909 29.1-130.3 -96.8 116.0 11.6 10.7 5.8 64 59 A W + 0 0 8 -21,-2.9 -22,-3.0 -2,-0.7 -21,-0.3 -0.694 41.9 154.2 -81.2 105.1 9.8 13.9 4.9 65 60 A D > - 0 0 57 -2,-0.9 4,-3.3 -24,-0.2 3,-0.4 -0.855 60.6 -98.2-124.8 161.0 9.1 14.3 1.2 66 61 A E T 4 S+ 0 0 38 -2,-0.3 4,-0.4 1,-0.2 34,-0.1 0.730 126.9 44.8 -45.5 -30.3 6.4 16.3 -0.6 67 62 A N T > S+ 0 0 44 2,-0.2 4,-1.5 3,-0.1 -1,-0.2 0.866 113.5 44.7 -79.5 -51.2 4.4 13.0 -0.8 68 63 A N H > S+ 0 0 41 -3,-0.4 4,-2.9 1,-0.2 3,-0.3 0.952 112.9 54.5 -57.2 -55.4 4.9 11.7 2.8 69 64 A M H X S+ 0 0 19 -4,-3.3 4,-2.8 1,-0.2 -1,-0.2 0.782 104.2 57.1 -52.3 -33.5 4.1 15.3 3.9 70 65 A S H > S+ 0 0 10 -4,-0.4 4,-1.3 -5,-0.4 -1,-0.2 0.942 106.5 45.6 -65.5 -52.5 0.9 15.0 1.9 71 66 A E H >X S+ 0 0 104 -4,-1.5 4,-1.0 -3,-0.3 3,-0.7 0.922 113.8 52.0 -53.4 -50.1 -0.4 12.0 3.7 72 67 A Y H >< S+ 0 0 19 -4,-2.9 3,-0.7 1,-0.2 7,-0.3 0.911 104.4 54.0 -58.8 -46.8 0.6 13.6 7.0 73 68 A L H 3< S+ 0 0 13 -4,-2.8 17,-1.7 1,-0.2 -1,-0.2 0.774 99.8 64.8 -61.5 -23.4 -1.3 16.8 6.3 74 69 A T H << S- 0 0 48 -4,-1.3 -1,-0.2 -3,-0.7 -2,-0.2 0.917 131.5 -14.0 -58.8 -51.7 -4.4 14.9 5.7 75 70 A N S+ 0 0 0 0, 0.0 4,-3.8 0, 0.0 7,-0.1 0.830 91.2 45.3 -52.1 -53.5 -1.6 13.9 11.4 77 72 A X H 4 S+ 0 0 148 10,-0.4 5,-0.1 2,-0.2 6,-0.1 0.748 111.8 56.3 -62.7 -28.7 -2.8 11.8 14.3 78 73 A K H 4 S+ 0 0 162 -6,-0.2 -1,-0.2 1,-0.2 -6,-0.1 0.951 116.4 33.6 -66.8 -53.4 -4.0 9.4 11.6 79 74 A Y H < S+ 0 0 53 -4,-2.3 -2,-0.2 -7,-0.3 -1,-0.2 0.765 131.9 33.2 -69.3 -39.3 -0.4 9.1 10.2 80 75 A I S >< S- 0 0 2 -4,-3.8 3,-2.3 -5,-0.2 -1,-0.2 -0.652 81.9-150.1-130.8 81.0 1.3 9.5 13.6 81 76 A P T 3 S+ 0 0 98 0, 0.0 -3,-0.1 0, 0.0 -4,-0.1 -0.186 84.1 15.5 -54.7 114.4 -0.7 8.0 16.4 82 77 A G T 3 S+ 0 0 56 1,-0.3 -26,-0.3 -5,-0.1 -25,-0.2 0.522 84.1 147.5 94.9 11.7 0.0 9.9 19.6 83 78 A T < - 0 0 5 -3,-2.3 -1,-0.3 -27,-0.1 -3,-0.1 -0.502 48.9-136.9 -68.9 144.1 1.7 13.1 18.0 84 79 A K + 0 0 104 -2,-0.1 2,-1.0 2,-0.1 -1,-0.1 0.264 67.5 120.5 -87.9 14.4 1.0 16.3 20.1 85 80 A M - 0 0 43 1,-0.1 2,-1.7 2,-0.1 -8,-0.2 -0.670 52.6-159.0 -82.1 106.7 0.3 18.2 16.8 86 81 A A + 0 0 88 -2,-1.0 2,-0.5 -10,-0.1 -1,-0.1 -0.501 43.0 130.6 -86.2 65.9 -3.3 19.3 17.5 87 82 A F - 0 0 32 -2,-1.7 -10,-0.4 1,-0.2 3,-0.1 -0.978 52.1-146.6-127.3 124.7 -4.2 20.0 13.8 88 83 A G - 0 0 53 -2,-0.5 2,-0.2 1,-0.2 -11,-0.2 0.919 48.2-108.8 -47.7 -59.9 -7.3 18.6 12.3 89 84 A G - 0 0 9 -14,-0.1 2,-0.6 -13,-0.1 -15,-0.3 -0.666 14.7 -98.2 138.2 164.5 -6.0 18.0 8.8 90 85 A L - 0 0 10 -17,-1.7 6,-0.1 -2,-0.2 -15,-0.0 -0.969 34.6-176.9-115.3 95.0 -6.3 19.5 5.3 91 86 A K + 0 0 126 -2,-0.6 2,-0.6 4,-0.1 -1,-0.1 0.817 59.2 86.4 -68.7 -30.7 -8.8 17.2 3.5 92 87 A K >> - 0 0 124 1,-0.2 4,-2.0 -18,-0.0 3,-0.6 -0.655 66.1-154.9 -79.1 114.5 -8.6 19.0 0.2 93 88 A E H 3> S+ 0 0 114 -2,-0.6 4,-3.2 1,-0.3 5,-0.2 0.896 97.6 58.8 -53.4 -43.3 -5.7 17.7 -1.9 94 89 A K H 3> S+ 0 0 139 1,-0.2 4,-2.4 2,-0.2 -1,-0.3 0.889 106.0 50.0 -55.9 -39.2 -5.6 21.1 -3.7 95 90 A D H <> S+ 0 0 45 -3,-0.6 4,-3.4 1,-0.2 -1,-0.2 0.856 111.9 46.8 -64.5 -45.7 -5.0 22.7 -0.2 96 91 A R H X S+ 0 0 35 -4,-2.0 4,-2.9 2,-0.2 -1,-0.2 0.867 110.6 52.5 -63.1 -43.5 -2.2 20.2 0.5 97 92 A N H X S+ 0 0 18 -4,-3.2 4,-1.4 2,-0.2 -91,-0.5 0.926 113.8 44.2 -61.2 -47.7 -0.7 20.8 -2.9 98 93 A D H >X S+ 0 0 22 -4,-2.4 4,-1.8 -5,-0.2 3,-0.5 0.971 116.1 45.5 -58.8 -58.4 -0.7 24.5 -2.3 99 94 A S H 3X S+ 0 0 2 -4,-3.4 4,-2.2 1,-0.3 3,-0.4 0.912 115.2 45.5 -52.2 -53.5 0.6 24.3 1.2 100 95 A I H 3X S+ 0 0 0 -4,-2.9 4,-2.3 1,-0.2 -1,-0.3 0.762 106.2 63.7 -61.4 -25.5 3.4 21.8 0.4 101 96 A T H < S+ 0 0 115 -4,-1.3 3,-1.2 -5,-0.2 -2,-0.2 0.991 120.9 39.0 -65.9 -64.8 9.8 26.7 -1.4 106 101 A A H 3< S+ 0 0 24 -4,-4.3 -3,-0.2 1,-0.3 -2,-0.2 0.734 108.7 59.4 -64.4 -31.3 10.2 28.3 2.1 107 102 A T T 3< 0 0 0 -4,-2.8 -68,-2.5 -5,-0.3 -1,-0.3 0.518 360.0 360.0 -83.6 -1.2 12.0 25.6 3.9 108 103 A E < 0 0 181 -3,-1.2 -1,-0.2 -4,-0.3 -2,-0.2 0.909 360.0 360.0 -83.4 360.0 15.1 25.4 1.6