==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 20-MAY-05 2CS1 . COMPND 2 MOLECULE: PMS1 PROTEIN HOMOLOG 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.KUROSAKI,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA,RIKEN STRUCTURAL . 92 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7927.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 62.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 15 16.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 38 41.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 96 0, 0.0 3,-0.1 0, 0.0 68,-0.0 0.000 360.0 360.0 360.0-100.3 6.4 -2.3 -14.2 2 2 A S - 0 0 138 1,-0.3 2,-0.3 0, 0.0 0, 0.0 0.919 360.0 -21.6 -75.6 -46.1 5.5 -1.0 -17.7 3 3 A S - 0 0 89 2,-0.0 -1,-0.3 0, 0.0 2,-0.1 -0.902 60.4-156.1-167.8 135.9 1.8 -1.8 -17.6 4 4 A G - 0 0 17 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.104 14.6-129.1 -99.1-160.7 -0.4 -4.2 -15.6 5 5 A S - 0 0 62 3,-0.2 3,-0.2 1,-0.1 5,-0.1 -0.934 41.3 -54.6-148.1 169.2 -3.8 -5.8 -16.3 6 6 A S S S+ 0 0 119 -2,-0.3 2,-0.7 1,-0.2 -1,-0.1 -0.052 110.9 33.0 -45.1 144.7 -7.2 -6.3 -14.7 7 7 A G S S+ 0 0 60 -3,-0.1 2,-0.6 1,-0.0 -1,-0.2 -0.815 90.4 80.5 112.0 -93.7 -7.1 -8.0 -11.3 8 8 A I S S- 0 0 16 -2,-0.7 2,-0.5 -3,-0.2 -3,-0.2 -0.343 81.7-132.0 -55.7 103.0 -4.0 -6.9 -9.4 9 9 A K - 0 0 175 -2,-0.6 -1,-0.1 1,-0.1 -3,-0.1 -0.447 21.7-134.0 -62.9 112.6 -5.0 -3.5 -8.0 10 10 A K - 0 0 132 -2,-0.5 3,-0.1 1,-0.1 -1,-0.1 -0.371 22.7-106.6 -69.6 146.3 -2.1 -1.2 -8.8 11 11 A P - 0 0 33 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.234 40.0 -90.2 -69.7 160.7 -0.9 1.2 -6.1 12 12 A M - 0 0 108 1,-0.1 2,-0.1 52,-0.1 52,-0.1 -0.572 42.0-137.5 -76.2 130.7 -1.5 4.9 -6.1 13 13 A S >> - 0 0 74 -2,-0.3 3,-2.1 1,-0.1 4,-1.8 -0.473 26.9-104.2 -86.3 158.8 1.1 7.0 -7.8 14 14 A A H 3> S+ 0 0 8 1,-0.3 4,-1.6 2,-0.2 5,-0.2 0.758 120.8 66.9 -51.3 -25.1 2.5 10.3 -6.5 15 15 A S H 3> S+ 0 0 66 1,-0.2 4,-0.6 2,-0.2 -1,-0.3 0.855 104.8 41.0 -65.7 -35.6 0.3 11.9 -9.2 16 16 A A H X> S+ 0 0 33 -3,-2.1 4,-2.9 2,-0.2 3,-0.7 0.924 110.2 57.1 -77.9 -48.1 -2.8 10.8 -7.3 17 17 A L H 3X S+ 0 0 22 -4,-1.8 4,-2.6 1,-0.3 5,-0.3 0.955 101.3 54.1 -46.2 -68.3 -1.6 11.5 -3.8 18 18 A F H 3X S+ 0 0 13 -4,-1.6 4,-0.7 1,-0.2 -1,-0.3 0.810 115.0 45.1 -36.7 -38.5 -0.9 15.2 -4.5 19 19 A V H XX S+ 0 0 23 -3,-0.7 4,-2.4 -4,-0.6 3,-1.6 0.974 112.7 45.5 -72.8 -58.2 -4.5 15.3 -5.7 20 20 A Q H 3< S+ 0 0 71 -4,-2.9 -2,-0.2 1,-0.3 -1,-0.2 0.659 109.8 61.1 -60.3 -14.3 -6.1 13.4 -2.9 21 21 A D H 3< S+ 0 0 52 -4,-2.6 -1,-0.3 -5,-0.3 4,-0.3 0.762 119.7 22.9 -83.1 -27.7 -4.0 15.5 -0.6 22 22 A H H > S+ 0 0 47 0, 0.0 4,-2.6 0, 0.0 3,-0.9 0.911 116.7 59.9 -69.8 -44.8 -10.7 17.6 0.3 25 25 A Q H 3> S+ 0 0 95 1,-0.3 4,-1.3 -4,-0.3 5,-0.2 0.814 104.4 53.0 -54.1 -31.3 -8.7 20.6 1.5 26 26 A F H 3X S+ 0 0 53 -4,-1.8 4,-0.9 2,-0.2 -1,-0.3 0.806 113.5 42.8 -74.6 -30.5 -10.0 22.4 -1.6 27 27 A L H << S+ 0 0 43 -3,-0.9 -2,-0.2 -4,-0.8 6,-0.2 0.966 108.8 53.7 -78.9 -59.8 -13.6 21.6 -0.8 28 28 A I H < S+ 0 0 124 -4,-2.6 -2,-0.2 1,-0.3 -3,-0.1 0.894 122.5 31.9 -40.1 -55.0 -13.7 22.3 2.9 29 29 A E H < S+ 0 0 130 -4,-1.3 -1,-0.3 -5,-0.3 -2,-0.2 0.829 135.7 31.3 -74.6 -33.2 -12.3 25.8 2.3 30 30 A N < + 0 0 66 -4,-0.9 3,-0.5 -5,-0.2 -1,-0.3 -0.705 65.9 155.9-129.3 80.8 -14.1 26.0 -1.0 31 31 A P + 0 0 96 0, 0.0 -1,-0.1 0, 0.0 -3,-0.1 0.917 68.2 70.1 -69.8 -45.5 -17.3 24.0 -1.0 32 32 A K S S+ 0 0 162 -5,-0.1 2,-0.4 2,-0.0 -5,-0.1 0.783 82.0 94.3 -43.1 -30.1 -19.0 26.0 -3.8 33 33 A T S S- 0 0 13 -3,-0.5 -3,-0.1 -7,-0.2 -7,-0.0 -0.542 83.5-124.5 -71.4 121.7 -16.5 24.3 -6.0 34 34 A S > - 0 0 82 -2,-0.4 4,-2.8 1,-0.1 5,-0.2 -0.174 25.3-103.9 -62.4 158.3 -17.9 21.1 -7.5 35 35 A L H > S+ 0 0 105 2,-0.2 4,-1.7 1,-0.2 5,-0.1 0.947 120.7 38.5 -46.8 -62.4 -16.2 17.8 -7.0 36 36 A E H >> S+ 0 0 118 1,-0.2 4,-2.8 2,-0.2 3,-1.1 0.979 113.3 53.6 -53.8 -66.3 -14.8 17.7 -10.5 37 37 A D H 3> S+ 0 0 58 1,-0.3 4,-1.5 2,-0.2 -1,-0.2 0.847 107.1 55.2 -36.5 -47.1 -14.0 21.4 -10.8 38 38 A A H 3X S+ 0 0 0 -4,-2.8 4,-1.3 2,-0.2 -1,-0.3 0.926 117.1 34.3 -55.3 -48.7 -12.0 21.0 -7.6 39 39 A T H XX S+ 0 0 32 -4,-1.7 4,-3.0 -3,-1.1 3,-0.6 0.967 107.6 64.5 -72.0 -55.4 -9.9 18.3 -9.1 40 40 A L H 3X S+ 0 0 112 -4,-2.8 4,-1.3 1,-0.3 -1,-0.2 0.790 110.6 43.1 -37.7 -34.1 -9.7 19.5 -12.6 41 41 A Q H 3X S+ 0 0 78 -4,-1.5 4,-1.2 -5,-0.4 -1,-0.3 0.862 111.1 52.3 -82.4 -39.5 -7.8 22.4 -11.1 42 42 A I H << S+ 0 0 1 -4,-1.3 4,-0.5 -3,-0.6 -2,-0.2 0.828 108.9 52.9 -65.6 -32.3 -5.7 20.3 -8.8 43 43 A E H >X S+ 0 0 81 -4,-3.0 3,-1.7 1,-0.2 4,-1.1 0.970 110.2 43.5 -67.5 -55.8 -4.6 18.2 -11.8 44 44 A E H 3X S+ 0 0 117 -4,-1.3 4,-0.7 -5,-0.3 -1,-0.2 0.717 109.6 61.2 -62.9 -20.0 -3.4 21.1 -14.0 45 45 A L H 3< S+ 0 0 78 -4,-1.2 -1,-0.3 1,-0.2 -2,-0.2 0.657 103.4 49.2 -80.5 -16.7 -1.8 22.5 -10.8 46 46 A W H <4 S+ 0 0 24 -3,-1.7 -2,-0.2 -4,-0.5 -1,-0.2 0.678 105.7 55.9 -93.4 -22.1 0.4 19.3 -10.6 47 47 A K H < S+ 0 0 145 -4,-1.1 -2,-0.2 1,-0.2 -1,-0.1 0.700 105.0 53.0 -81.8 -20.9 1.5 19.4 -14.2 48 48 A T S < S+ 0 0 107 -4,-0.7 -1,-0.2 2,-0.0 -2,-0.2 0.552 89.7 105.7 -89.4 -9.8 2.8 23.0 -13.8 49 49 A L S S- 0 0 39 -3,-0.2 2,-0.1 1,-0.1 -3,-0.1 -0.100 73.9-106.7 -64.6 168.3 4.9 22.0 -10.8 50 50 A S > - 0 0 84 1,-0.1 4,-1.2 0, 0.0 -1,-0.1 -0.299 27.9-102.9 -90.7 178.0 8.7 21.6 -11.1 51 51 A E H >> S+ 0 0 136 2,-0.2 4,-2.5 3,-0.1 3,-0.9 0.993 118.1 42.8 -64.7 -64.1 10.8 18.4 -11.1 52 52 A E H 3> S+ 0 0 157 1,-0.3 4,-2.1 2,-0.2 5,-0.2 0.936 109.3 58.0 -47.2 -57.7 12.1 18.5 -7.5 53 53 A E H 34 S+ 0 0 99 1,-0.3 4,-0.5 2,-0.2 -1,-0.3 0.843 111.5 44.2 -42.2 -40.4 8.7 19.5 -6.2 54 54 A K H XX S+ 0 0 51 -4,-1.2 4,-2.7 -3,-0.9 3,-1.8 0.918 104.3 62.2 -73.0 -45.4 7.4 16.3 -7.8 55 55 A L H 3X S+ 0 0 73 -4,-2.5 4,-2.0 1,-0.3 5,-0.3 0.901 93.6 64.1 -46.1 -48.9 10.3 14.1 -6.6 56 56 A K H 3< S+ 0 0 145 -4,-2.1 -1,-0.3 1,-0.3 4,-0.2 0.837 114.1 33.6 -45.3 -37.3 9.3 14.8 -3.0 57 57 A Y H X> S+ 0 0 51 -3,-1.8 3,-1.5 -4,-0.5 4,-0.9 0.812 106.5 68.8 -88.8 -35.2 6.0 13.0 -3.8 58 58 A E H 3X S+ 0 0 84 -4,-2.7 4,-1.9 1,-0.3 3,-0.4 0.809 97.9 55.3 -53.3 -30.8 7.6 10.5 -6.2 59 59 A E H 3X S+ 0 0 124 -4,-2.0 4,-2.1 1,-0.2 -1,-0.3 0.771 99.2 60.2 -73.9 -26.7 9.3 9.0 -3.2 60 60 A K H <4 S+ 0 0 111 -3,-1.5 -1,-0.2 -5,-0.3 -2,-0.2 0.716 110.2 42.4 -73.0 -20.9 6.0 8.5 -1.4 61 61 A A H < S+ 0 0 19 -4,-0.9 3,-0.3 -3,-0.4 4,-0.3 0.846 115.6 45.8 -91.5 -42.0 4.9 6.3 -4.3 62 62 A T H >X S+ 0 0 69 -4,-1.9 3,-1.5 1,-0.2 4,-0.5 0.902 106.2 59.4 -68.2 -42.3 8.1 4.3 -4.7 63 63 A K T 3< S+ 0 0 167 -4,-2.1 3,-0.3 1,-0.3 -1,-0.2 0.781 112.3 41.5 -57.3 -26.8 8.5 3.7 -1.0 64 64 A D T >4 S+ 0 0 63 -3,-0.3 3,-1.7 -4,-0.2 4,-0.4 0.448 89.7 90.6 -98.7 -3.9 5.1 2.0 -1.1 65 65 A L T <> + 0 0 68 -3,-1.5 4,-2.1 1,-0.3 3,-0.4 0.740 61.9 87.6 -63.2 -22.3 5.9 0.2 -4.4 66 66 A E H 3X S+ 0 0 102 -4,-0.5 4,-0.5 -3,-0.3 -1,-0.3 0.699 84.9 58.8 -50.4 -18.3 7.2 -2.7 -2.3 67 67 A R H X> S+ 0 0 146 -3,-1.7 4,-1.5 2,-0.2 3,-1.0 0.951 103.8 44.6 -77.3 -53.7 3.6 -3.8 -2.4 68 68 A Y H 34 S+ 0 0 16 -3,-0.4 4,-0.3 -4,-0.4 -2,-0.2 0.865 108.7 59.4 -58.9 -37.4 3.2 -4.1 -6.1 69 69 A N H 3X S+ 0 0 74 -4,-2.1 4,-0.9 1,-0.2 3,-0.4 0.793 106.5 48.3 -62.3 -28.0 6.5 -5.9 -6.3 70 70 A S H S+ 0 0 39 -3,-0.4 4,-0.9 -4,-0.3 -1,-0.2 0.835 86.0 70.4 -95.7 -43.5 4.1 -9.8 -9.0 73 73 A K H < S+ 0 0 149 -4,-0.9 3,-0.4 1,-0.3 -2,-0.1 0.856 111.0 36.3 -41.2 -43.7 6.0 -12.8 -7.6 74 74 A R H >< S+ 0 0 117 -4,-0.6 3,-1.1 1,-0.2 -1,-0.3 0.852 112.7 57.4 -79.9 -37.1 2.8 -14.7 -7.8 75 75 A A H 3< S+ 0 0 4 -4,-0.5 6,-0.5 1,-0.3 5,-0.4 0.409 77.2 99.9 -74.2 4.3 1.6 -13.0 -11.1 76 76 A I T 3< S+ 0 0 122 -4,-0.9 -1,-0.3 -3,-0.4 2,-0.2 0.615 81.2 56.7 -65.5 -10.8 4.9 -14.3 -12.6 77 77 A E S X> S- 0 0 148 -3,-1.1 2,-2.3 -5,-0.2 3,-1.1 -0.449 115.5 -73.5-110.6-175.0 2.8 -17.0 -14.1 78 78 A Q T 34 S+ 0 0 146 1,-0.2 -2,-0.1 -2,-0.2 -3,-0.1 -0.202 105.8 94.9 -75.8 49.0 -0.3 -17.2 -16.4 79 79 A E T 34 S+ 0 0 99 -2,-2.3 -1,-0.2 -4,-0.2 -4,-0.1 0.693 103.2 4.8-108.3 -31.2 -2.4 -16.1 -13.4 80 80 A S T <4 S+ 0 0 25 -3,-1.1 2,-0.4 -5,-0.4 -2,-0.1 0.653 125.3 56.9-121.7 -40.5 -2.5 -12.3 -14.1 81 81 A Q < - 0 0 76 -4,-0.9 2,-0.4 -6,-0.5 -1,-0.2 -0.797 63.9-168.0-101.0 140.2 -0.7 -11.8 -17.4 82 82 A M + 0 0 160 -2,-0.4 2,-0.3 -3,-0.1 -4,-0.0 -0.965 9.6 168.5-128.9 144.6 -1.8 -13.5 -20.6 83 83 A S - 0 0 102 -2,-0.4 2,-0.5 2,-0.0 -5,-0.0 -0.918 29.3-117.6-146.0 170.3 -0.0 -13.9 -24.0 84 84 A L - 0 0 171 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.961 24.4-176.3-119.2 128.6 -0.2 -15.7 -27.3 85 85 A K - 0 0 206 -2,-0.5 2,-0.2 2,-0.0 -2,-0.0 -0.984 13.1-147.5-127.4 125.7 2.5 -18.1 -28.6 86 86 A D - 0 0 150 -2,-0.4 2,-0.6 1,-0.0 -2,-0.0 -0.500 16.4-123.7 -87.7 158.1 2.4 -19.8 -31.9 87 87 A S - 0 0 100 -2,-0.2 -1,-0.0 1,-0.0 -2,-0.0 -0.903 23.1-139.9-107.3 121.8 3.9 -23.3 -32.6 88 88 A G - 0 0 60 -2,-0.6 -1,-0.0 1,-0.1 0, 0.0 -0.014 34.4 -76.2 -68.2 178.2 6.5 -23.6 -35.4 89 89 A P - 0 0 137 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.087 46.7-114.8 -69.8 173.4 6.7 -26.5 -37.9 90 90 A S - 0 0 122 1,-0.0 2,-0.2 2,-0.0 0, 0.0 -0.461 21.6-142.4-104.6 178.5 8.1 -30.0 -37.1 91 91 A S 0 0 112 -2,-0.2 -1,-0.0 0, 0.0 0, 0.0 -0.775 360.0 360.0-133.7 177.9 11.1 -31.9 -38.3 92 92 A G 0 0 130 -2,-0.2 -2,-0.0 0, 0.0 0, 0.0 0.342 360.0 360.0 -39.3 360.0 12.1 -35.5 -39.3