==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 23-MAY-05 2CT1 . COMPND 2 MOLECULE: TRANSCRIPTIONAL REPRESSOR CTCF; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.MIYAMOTO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 77 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6499.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 36 46.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 7.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 23.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 135 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 104.0 -37.4 -8.6 13.0 2 2 A S + 0 0 122 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.680 360.0 146.8-169.0 108.0 -35.3 -10.5 10.5 3 3 A S + 0 0 131 -2,-0.2 2,-0.1 2,-0.0 0, 0.0 -0.820 11.5 171.4-136.6 175.5 -34.0 -9.5 7.0 4 4 A G + 0 0 75 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.496 8.0 154.9 169.9 116.5 -31.1 -9.9 4.7 5 5 A S - 0 0 127 -2,-0.1 2,-0.3 2,-0.0 -2,-0.0 -0.983 19.1-155.8-153.9 139.8 -30.4 -9.0 1.1 6 6 A S + 0 0 121 -2,-0.3 2,-0.0 2,-0.0 -2,-0.0 -0.868 20.5 155.3-117.8 151.0 -27.2 -8.3 -1.0 7 7 A G + 0 0 79 -2,-0.3 2,-0.4 0, 0.0 -2,-0.0 -0.338 15.0 137.3-175.6 85.1 -26.8 -6.3 -4.2 8 8 A R + 0 0 237 -2,-0.0 2,-0.4 2,-0.0 -2,-0.0 -0.912 15.4 165.2-141.5 110.9 -23.4 -4.8 -5.2 9 9 A T + 0 0 147 -2,-0.4 2,-0.3 2,-0.0 0, 0.0 -0.990 3.3 156.2-130.1 130.5 -22.1 -4.9 -8.7 10 10 A H - 0 0 153 -2,-0.4 2,-0.1 2,-0.0 -2,-0.0 -0.872 40.2-120.0-156.3 117.9 -19.2 -2.8 -10.2 11 11 A S S S+ 0 0 112 -2,-0.3 -2,-0.0 2,-0.0 0, 0.0 -0.328 81.9 50.8 -58.7 130.3 -17.0 -3.6 -13.2 12 12 A G - 0 0 54 -2,-0.1 2,-0.5 14,-0.0 -2,-0.0 0.415 69.0-135.3 107.2 117.0 -13.4 -3.7 -12.1 13 13 A E + 0 0 145 11,-0.0 -2,-0.0 2,-0.0 -1,-0.0 -0.883 28.1 163.5-106.7 131.7 -11.8 -5.7 -9.3 14 14 A K - 0 0 90 -2,-0.5 12,-0.2 1,-0.0 11,-0.1 -0.817 24.5-166.9-150.9 105.0 -9.2 -4.2 -7.0 15 15 A P S S+ 0 0 103 0, 0.0 2,-0.3 0, 0.0 11,-0.1 0.431 79.8 61.5 -69.8 2.9 -8.2 -5.7 -3.6 16 16 A Y E +A 25 0A 94 9,-1.4 9,-2.8 2,-0.0 2,-0.3 -0.923 59.2 171.3-130.9 155.8 -6.5 -2.4 -2.9 17 17 A E E -A 24 0A 79 -2,-0.3 2,-0.5 7,-0.3 7,-0.3 -0.963 35.8-107.4-163.3 145.1 -7.6 1.2 -2.5 18 18 A C > - 0 0 0 5,-1.7 4,-1.6 -2,-0.3 5,-0.1 -0.638 16.6-155.6 -79.6 124.6 -6.3 4.6 -1.4 19 19 A Y T 4 S+ 0 0 173 -2,-0.5 -1,-0.1 1,-0.2 0, 0.0 0.205 91.9 54.4 -83.1 16.9 -7.6 5.7 2.0 20 20 A I T 4 S+ 0 0 53 3,-0.1 -1,-0.2 0, 0.0 -2,-0.0 0.736 129.3 5.8-113.9 -47.9 -6.9 9.3 0.9 21 21 A C T 4 S- 0 0 55 2,-0.1 -2,-0.2 0, 0.0 3,-0.1 0.429 96.0-117.0-116.5 -6.6 -8.6 9.8 -2.4 22 22 A H < + 0 0 134 -4,-1.6 2,-0.8 1,-0.2 -3,-0.1 0.778 54.8 164.0 73.6 27.1 -10.5 6.5 -2.6 23 23 A A - 0 0 29 -5,-0.1 -5,-1.7 8,-0.1 -1,-0.2 -0.698 30.8-139.1 -83.0 108.4 -8.5 5.5 -5.7 24 24 A R E -A 17 0A 137 -2,-0.8 2,-0.3 -7,-0.3 -7,-0.3 -0.206 20.0-167.5 -63.2 156.1 -8.9 1.7 -6.2 25 25 A F E -A 16 0A 27 -9,-2.8 -9,-1.4 -11,-0.1 -1,-0.0 -0.979 27.3-157.9-151.6 135.2 -5.9 -0.3 -7.3 26 26 A T S S+ 0 0 78 -2,-0.3 2,-0.4 -12,-0.2 3,-0.1 0.412 84.7 63.0 -90.5 0.8 -5.4 -3.8 -8.6 27 27 A Q > - 0 0 111 1,-0.1 4,-2.0 -13,-0.1 5,-0.2 -0.992 68.6-149.5-131.7 129.1 -1.7 -3.8 -7.5 28 28 A S H > S+ 0 0 40 -2,-0.4 4,-1.7 1,-0.2 5,-0.1 0.846 102.9 48.7 -61.7 -34.5 -0.4 -3.5 -4.0 29 29 A G H > S+ 0 0 15 2,-0.2 4,-2.5 1,-0.2 5,-0.2 0.938 107.4 52.1 -71.6 -48.3 2.7 -1.7 -5.4 30 30 A T H > S+ 0 0 71 2,-0.2 4,-1.7 1,-0.2 -2,-0.2 0.922 111.2 48.7 -53.7 -48.6 0.9 0.8 -7.6 31 31 A M H >X S+ 0 0 19 -4,-2.0 4,-2.5 2,-0.2 3,-1.0 0.977 110.9 47.7 -56.2 -61.8 -1.3 1.9 -4.7 32 32 A K H 3X S+ 0 0 48 -4,-1.7 4,-1.3 1,-0.3 -1,-0.2 0.875 114.3 48.6 -47.4 -42.9 1.6 2.4 -2.2 33 33 A M H 3X S+ 0 0 64 -4,-2.5 4,-0.5 1,-0.2 -1,-0.3 0.790 109.5 53.8 -69.3 -28.1 3.4 4.3 -4.9 34 34 A H H S+ 0 0 32 -4,-1.7 4,-3.2 -3,-1.0 5,-0.7 0.894 105.9 50.7 -73.0 -41.7 0.3 6.4 -5.6 35 35 A I H X5S+ 0 0 14 -4,-2.5 4,-0.5 1,-0.2 -2,-0.2 0.809 116.4 42.2 -65.8 -30.0 -0.1 7.4 -1.9 36 36 A L H <5S+ 0 0 30 -4,-1.3 -1,-0.2 -5,-0.3 -2,-0.2 0.544 118.2 47.4 -92.3 -9.7 3.5 8.6 -1.9 37 37 A Q H <5S+ 0 0 128 -4,-0.5 3,-0.3 -3,-0.3 -2,-0.2 0.817 128.5 20.5 -97.1 -41.2 3.2 10.1 -5.4 38 38 A K H <5S+ 0 0 148 -4,-3.2 3,-0.2 1,-0.2 -3,-0.2 0.754 136.1 36.9 -97.6 -32.3 -0.0 12.1 -4.9 39 39 A H S < S- 0 0 154 -12,-0.1 4,-1.7 1,-0.1 3,-0.4 -0.811 70.7 -96.9-131.6 172.0 10.5 10.7 5.9 58 58 A K H >> S+ 0 0 74 -2,-0.3 3,-1.1 1,-0.2 4,-1.0 0.966 121.0 55.2 -52.4 -61.3 10.4 10.8 2.1 59 59 A S H 3> S+ 0 0 68 1,-0.3 4,-0.7 2,-0.2 -1,-0.2 0.830 108.3 52.3 -41.7 -38.4 14.0 12.1 1.7 60 60 A D H >> S+ 0 0 67 -3,-0.4 4,-1.4 1,-0.2 3,-0.7 0.894 94.0 71.4 -67.4 -41.1 15.0 9.0 3.8 61 61 A L H XX S+ 0 0 12 -4,-1.7 4,-2.6 -3,-1.1 3,-0.8 0.900 91.6 58.1 -39.8 -57.3 13.1 6.7 1.5 62 62 A G H 3X S+ 0 0 28 -4,-1.0 4,-2.0 1,-0.3 5,-0.3 0.889 101.5 55.0 -41.2 -53.3 15.6 7.1 -1.2 63 63 A V H S+ 0 0 18 -4,-1.4 5,-1.8 -3,-0.8 4,-0.9 0.881 110.2 54.5 -66.5 -39.1 16.4 2.7 1.7 65 65 A L H <5S+ 0 0 23 -4,-2.6 6,-0.4 -5,-0.2 -1,-0.2 0.770 116.8 38.6 -65.9 -25.6 15.6 2.3 -2.0 66 66 A R H <5S+ 0 0 137 -4,-2.0 -2,-0.2 -5,-0.3 -1,-0.2 0.842 123.5 38.8 -91.4 -41.3 19.4 2.5 -2.7 67 67 A K H <5S+ 0 0 152 -4,-3.2 -3,-0.2 -5,-0.3 -2,-0.1 0.992 131.4 22.3 -71.7 -74.6 20.6 0.5 0.3 68 68 A Q T <5S+ 0 0 148 -4,-0.9 -3,-0.2 -5,-0.2 2,-0.1 0.940 136.3 28.6 -59.5 -49.8 18.1 -2.3 0.6 69 69 A H S