==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 24-MAY-05 2CTO . COMPND 2 MOLECULE: NOVEL PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.TOMIZAWA,T.KIGAWA,M.SATO,S.KOSHIBA,M.INOUE,Y.O.KAMATARI, . 93 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8306.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 53.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 38.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 124 0, 0.0 2,-1.7 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-146.3 -2.2 14.3 17.6 2 2 A S + 0 0 136 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.564 360.0 113.3 -78.1 85.7 0.4 16.7 16.2 3 3 A S - 0 0 109 -2,-1.7 0, 0.0 0, 0.0 0, 0.0 -0.921 58.5-128.4-159.1 128.9 0.0 15.9 12.5 4 4 A G - 0 0 76 -2,-0.3 2,-0.4 1,-0.1 0, 0.0 0.188 42.8 -79.7 -62.3-170.2 -1.2 17.9 9.5 5 5 A S + 0 0 130 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.791 55.8 154.7-100.9 140.8 -3.9 16.7 7.0 6 6 A S + 0 0 83 -2,-0.4 45,-0.1 1,-0.1 0, 0.0 -0.976 23.5 69.6-156.3 164.7 -3.1 14.3 4.2 7 7 A G - 0 0 44 -2,-0.3 -1,-0.1 1,-0.1 40,-0.0 0.455 47.9-148.3 92.5 127.5 -4.7 11.8 1.9 8 8 A M - 0 0 157 2,-0.1 2,-0.4 0, 0.0 -1,-0.1 -0.977 23.6-105.6-132.2 144.3 -7.2 12.3 -0.9 9 9 A P + 0 0 124 0, 0.0 2,-0.2 0, 0.0 -2,-0.0 -0.518 54.9 143.6 -69.7 120.1 -10.1 10.2 -2.3 10 10 A N - 0 0 117 -2,-0.4 2,-1.3 2,-0.1 -2,-0.1 -0.773 41.7-145.3-163.3 112.2 -9.2 8.7 -5.6 11 11 A R - 0 0 205 -2,-0.2 2,-0.3 2,-0.0 29,-0.0 -0.656 27.0-170.4 -82.7 94.1 -10.1 5.2 -7.0 12 12 A K - 0 0 125 -2,-1.3 4,-0.1 1,-0.1 -2,-0.1 -0.663 22.0-146.5 -88.2 140.1 -7.0 4.3 -9.0 13 13 A A S S+ 0 0 93 -2,-0.3 -1,-0.1 2,-0.1 2,-0.1 0.931 81.4 71.4 -68.8 -47.3 -7.1 1.2 -11.3 14 14 A S S S- 0 0 44 1,-0.1 2,-0.7 5,-0.0 5,-0.1 -0.419 97.7-104.1 -72.3 145.8 -3.4 0.3 -10.7 15 15 A R - 0 0 109 50,-0.1 2,-0.2 -2,-0.1 54,-0.2 -0.599 48.9-179.7 -74.6 110.4 -2.4 -1.1 -7.4 16 16 A N >> - 0 0 53 -2,-0.7 4,-2.4 -4,-0.1 3,-1.2 -0.613 48.6 -83.8-107.3 168.9 -0.6 1.7 -5.5 17 17 A A H 3> S+ 0 0 8 1,-0.3 4,-2.2 2,-0.2 5,-0.2 0.835 133.4 50.6 -35.5 -46.0 1.0 1.9 -2.0 18 18 A Y H 3> S+ 0 0 60 1,-0.2 4,-2.0 2,-0.2 -1,-0.3 0.903 109.3 50.0 -62.6 -42.5 -2.5 2.6 -0.7 19 19 A Y H <> S+ 0 0 59 -3,-1.2 4,-2.5 1,-0.2 -2,-0.2 0.907 110.2 50.0 -63.1 -43.2 -4.0 -0.4 -2.5 20 20 A F H X S+ 0 0 27 -4,-2.4 4,-1.6 1,-0.2 -1,-0.2 0.896 108.9 52.3 -62.8 -41.5 -1.2 -2.7 -1.2 21 21 A F H < S+ 0 0 7 -4,-2.2 -1,-0.2 -5,-0.3 -2,-0.2 0.901 112.3 45.2 -61.9 -42.3 -1.8 -1.5 2.4 22 22 A V H >X S+ 0 0 0 -4,-2.0 3,-2.4 1,-0.2 4,-1.6 0.893 105.8 60.4 -68.8 -41.0 -5.6 -2.2 2.1 23 23 A Q H 3< S+ 0 0 86 -4,-2.5 3,-0.3 1,-0.3 -1,-0.2 0.883 104.7 49.3 -53.9 -41.5 -5.0 -5.6 0.5 24 24 A E T 3< S+ 0 0 131 -4,-1.6 -1,-0.3 1,-0.2 -2,-0.2 0.339 114.6 47.8 -80.9 7.9 -3.1 -6.7 3.6 25 25 A K T <> S+ 0 0 39 -3,-2.4 4,-2.6 -5,-0.1 5,-0.3 0.523 85.1 87.0-120.1 -17.2 -6.0 -5.4 5.6 26 26 A I H X S+ 0 0 30 -4,-1.6 4,-1.8 -3,-0.3 3,-0.2 0.944 99.6 36.2 -48.2 -57.8 -8.9 -7.0 3.7 27 27 A P H > S+ 0 0 73 0, 0.0 4,-1.2 0, 0.0 -1,-0.3 0.721 113.1 61.9 -69.8 -21.9 -8.8 -10.2 5.7 28 28 A E H > S+ 0 0 105 2,-0.2 4,-1.2 1,-0.2 -2,-0.2 0.883 107.7 41.2 -71.9 -39.8 -7.9 -8.2 8.8 29 29 A L H X>S+ 0 0 11 -4,-2.6 4,-2.0 -3,-0.2 5,-1.1 0.882 105.0 65.3 -75.1 -40.1 -11.1 -6.3 8.8 30 30 A R H <5S+ 0 0 146 -4,-1.8 -1,-0.2 -5,-0.3 -2,-0.2 0.891 105.7 44.7 -48.5 -45.3 -13.2 -9.4 7.9 31 31 A R H <5S+ 0 0 234 -4,-1.2 -1,-0.2 1,-0.2 -2,-0.2 0.894 105.3 61.5 -67.7 -41.0 -12.3 -10.9 11.3 32 32 A R H <5S- 0 0 201 -4,-1.2 -1,-0.2 -5,-0.1 -2,-0.2 0.871 124.5 -99.1 -53.4 -39.5 -13.0 -7.7 13.1 33 33 A G T <5S+ 0 0 59 -4,-2.0 -3,-0.2 1,-0.3 -2,-0.1 0.689 76.6 129.9 120.4 41.5 -16.6 -7.8 12.0 34 34 A L < - 0 0 63 -5,-1.1 2,-1.6 -4,-0.1 -1,-0.3 -0.958 65.3-107.2-127.2 144.2 -16.9 -5.5 9.0 35 35 A P + 0 0 93 0, 0.0 2,-0.4 0, 0.0 -5,-0.1 -0.490 59.6 147.1 -69.7 87.9 -18.4 -6.1 5.5 36 36 A V + 0 0 3 -2,-1.6 -6,-0.1 1,-0.1 -2,-0.1 -0.907 12.5 155.5-131.2 105.2 -15.3 -6.3 3.4 37 37 A A S S+ 0 0 74 -2,-0.4 2,-0.2 1,-0.2 -1,-0.1 0.835 72.1 0.0 -93.2 -41.2 -15.2 -8.5 0.4 38 38 A R S >> S- 0 0 158 1,-0.1 4,-1.9 -12,-0.1 3,-0.8 -0.783 85.0 -85.1-138.4-178.7 -12.5 -6.8 -1.7 39 39 A V H 3> S+ 0 0 14 1,-0.3 4,-0.9 -2,-0.2 3,-0.2 0.948 121.6 61.7 -55.7 -53.3 -10.1 -3.8 -1.5 40 40 A A H 34 S+ 0 0 33 1,-0.3 -1,-0.3 2,-0.2 3,-0.2 0.801 109.7 44.5 -43.7 -32.8 -12.7 -1.4 -2.9 41 41 A D H <> S+ 0 0 64 -3,-0.8 4,-0.7 1,-0.2 -1,-0.3 0.878 114.1 46.2 -80.8 -41.4 -14.7 -2.3 0.2 42 42 A A H < S+ 0 0 0 -4,-1.9 4,-0.3 -3,-0.2 -2,-0.2 0.296 91.2 92.8 -83.8 10.2 -11.7 -2.0 2.6 43 43 A I T >< S+ 0 0 47 -4,-0.9 3,-0.7 -3,-0.2 -1,-0.2 0.979 94.4 29.2 -66.1 -58.5 -10.8 1.3 1.0 44 44 A P G >4 S+ 0 0 73 0, 0.0 3,-2.3 0, 0.0 4,-0.5 0.891 113.9 62.5 -69.8 -41.6 -12.7 3.6 3.4 45 45 A Y G 3< S+ 0 0 108 -4,-0.7 -2,-0.2 1,-0.3 4,-0.1 0.621 113.0 40.0 -60.7 -10.7 -12.4 1.3 6.4 46 46 A C G <> S+ 0 0 1 -3,-0.7 4,-0.8 -4,-0.3 -1,-0.3 -0.063 86.6 98.4-128.4 31.2 -8.7 1.8 5.9 47 47 A S H <> S+ 0 0 61 -3,-2.3 4,-0.9 2,-0.2 -2,-0.1 0.820 88.9 40.6 -86.9 -35.5 -8.7 5.5 5.1 48 48 A S H > S+ 0 0 97 -4,-0.5 4,-0.6 2,-0.2 -1,-0.1 0.807 113.7 53.9 -81.9 -32.1 -7.8 6.7 8.6 49 49 A D H >> S+ 0 0 73 1,-0.2 4,-0.8 2,-0.2 3,-0.6 0.873 105.7 53.2 -69.5 -38.0 -5.3 4.0 9.3 50 50 A W H >< S+ 0 0 28 -4,-0.8 3,-0.7 1,-0.2 -1,-0.2 0.872 102.8 57.6 -65.0 -37.9 -3.4 4.8 6.1 51 51 A A H 3< S+ 0 0 48 -4,-0.9 -1,-0.2 1,-0.2 -2,-0.2 0.739 99.1 61.7 -64.7 -22.5 -3.1 8.4 7.2 52 52 A L H << S+ 0 0 129 -4,-0.6 -1,-0.2 -3,-0.6 -2,-0.2 0.822 84.6 97.6 -73.1 -32.0 -1.4 7.2 10.4 53 53 A L S << S- 0 0 28 -4,-0.8 2,-0.2 -3,-0.7 -3,-0.0 -0.080 77.2-117.1 -54.2 157.5 1.5 5.6 8.3 54 54 A R >> - 0 0 177 1,-0.1 4,-2.4 0, 0.0 3,-0.9 -0.672 25.1-104.2-100.3 155.7 4.7 7.6 8.0 55 55 A E H 3> S+ 0 0 178 1,-0.3 4,-2.7 -2,-0.2 5,-0.2 0.868 123.3 55.8 -41.0 -46.9 6.3 9.0 4.8 56 56 A E H 3> S+ 0 0 120 1,-0.2 4,-1.9 2,-0.2 -1,-0.3 0.919 110.0 44.7 -54.2 -47.8 8.8 6.1 5.0 57 57 A E H <> S+ 0 0 59 -3,-0.9 4,-2.4 2,-0.2 5,-0.3 0.962 111.4 51.5 -62.2 -54.2 6.0 3.6 5.1 58 58 A K H X S+ 0 0 45 -4,-2.4 4,-2.2 1,-0.3 -2,-0.2 0.900 111.7 48.3 -49.8 -46.0 4.0 5.1 2.3 59 59 A E H X S+ 0 0 121 -4,-2.7 4,-2.5 -5,-0.3 -1,-0.3 0.873 108.5 55.2 -63.8 -38.0 7.1 5.2 0.1 60 60 A K H X S+ 0 0 110 -4,-1.9 4,-2.6 -5,-0.2 5,-0.3 0.946 111.4 42.0 -60.6 -50.7 7.8 1.6 1.0 61 61 A Y H X S+ 0 0 48 -4,-2.4 4,-1.8 1,-0.2 -1,-0.2 0.864 116.1 50.3 -65.2 -36.8 4.4 0.4 -0.2 62 62 A A H X S+ 0 0 28 -4,-2.2 4,-2.2 -5,-0.3 -1,-0.2 0.841 112.7 47.2 -70.2 -34.1 4.6 2.6 -3.2 63 63 A E H X S+ 0 0 111 -4,-2.5 4,-2.6 2,-0.2 5,-0.3 0.958 114.3 43.7 -72.0 -53.2 8.0 1.3 -4.1 64 64 A M H X S+ 0 0 74 -4,-2.6 4,-1.5 1,-0.2 -2,-0.2 0.848 116.9 49.6 -60.8 -34.9 7.2 -2.4 -3.7 65 65 A A H X S+ 0 0 1 -4,-1.8 4,-2.4 -5,-0.3 5,-0.2 0.940 111.4 46.5 -69.8 -49.3 3.9 -1.8 -5.6 66 66 A R H X S+ 0 0 184 -4,-2.2 4,-2.4 1,-0.2 -2,-0.2 0.943 115.7 45.3 -58.5 -50.9 5.5 0.1 -8.5 67 67 A E H X S+ 0 0 72 -4,-2.6 4,-2.7 1,-0.2 5,-0.2 0.845 110.7 56.3 -62.1 -34.4 8.3 -2.5 -8.9 68 68 A W H X S+ 0 0 106 -4,-1.5 4,-2.1 -5,-0.3 -1,-0.2 0.934 110.6 42.1 -63.5 -47.8 5.7 -5.3 -8.6 69 69 A R H X S+ 0 0 101 -4,-2.4 4,-2.0 2,-0.2 -2,-0.2 0.893 115.0 51.5 -66.8 -40.8 3.6 -4.0 -11.5 70 70 A A H X S+ 0 0 49 -4,-2.4 4,-2.1 -5,-0.2 5,-0.3 0.934 114.4 41.8 -61.8 -48.4 6.7 -3.2 -13.6 71 71 A A H X S+ 0 0 7 -4,-2.7 4,-0.9 1,-0.2 -1,-0.2 0.842 117.1 48.8 -68.1 -34.2 8.1 -6.7 -13.1 72 72 A Q H < S+ 0 0 82 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.752 119.0 40.3 -76.8 -25.0 4.7 -8.3 -13.6 73 73 A G H < S+ 0 0 55 -4,-2.0 -2,-0.2 -5,-0.2 -3,-0.2 0.953 107.0 54.1 -86.2 -67.7 4.1 -6.2 -16.7 74 74 A K H < S+ 0 0 167 -4,-2.1 -3,-0.2 -5,-0.2 -2,-0.1 0.823 126.9 19.8 -34.5 -44.1 7.3 -6.1 -18.7 75 75 A D < - 0 0 98 -4,-0.9 -1,-0.1 -5,-0.3 4,-0.0 -0.985 69.4-136.7-134.9 144.1 7.3 -9.9 -18.5 76 76 A P S S+ 0 0 129 0, 0.0 -2,-0.1 0, 0.0 -1,-0.1 0.665 87.2 76.4 -69.8 -16.6 4.5 -12.4 -17.8 77 77 A G S S- 0 0 27 1,-0.1 -2,-0.2 -6,-0.1 2,-0.0 -0.407 94.8 -82.6 -92.6 171.1 6.8 -14.3 -15.5 78 78 A P + 0 0 115 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.268 42.5 177.6 -69.8 157.2 8.0 -13.6 -12.0 79 79 A S + 0 0 55 -11,-0.1 2,-0.4 -4,-0.0 -8,-0.1 -0.720 3.8 170.9-166.7 110.0 10.9 -11.2 -11.2 80 80 A E + 0 0 193 -2,-0.2 2,-0.3 -9,-0.1 -12,-0.0 -0.979 14.0 138.9-127.6 136.7 12.2 -10.1 -7.8 81 81 A K + 0 0 135 -2,-0.4 2,-0.3 2,-0.0 -2,-0.0 -0.980 13.9 171.4-166.8 161.1 15.3 -8.1 -7.0 82 82 A Q - 0 0 137 -2,-0.3 -2,-0.0 2,-0.0 0, 0.0 -0.918 25.7-123.2-174.8 148.8 16.7 -5.3 -4.8 83 83 A K - 0 0 140 -2,-0.3 2,-1.3 1,-0.0 -2,-0.0 -0.796 34.7-106.5-103.9 144.0 20.0 -3.6 -3.8 84 84 A P + 0 0 121 0, 0.0 2,-0.4 0, 0.0 -1,-0.0 -0.513 58.2 154.6 -69.7 93.6 21.3 -3.3 -0.3 85 85 A V + 0 0 85 -2,-1.3 2,-0.3 2,-0.0 -2,-0.0 -0.978 15.2 168.2-127.6 138.0 20.7 0.4 0.5 86 86 A F + 0 0 194 -2,-0.4 2,-0.3 2,-0.0 0, 0.0 -0.902 11.4 144.6-152.2 118.3 20.2 2.1 3.8 87 87 A T + 0 0 125 -2,-0.3 2,-0.3 0, 0.0 -2,-0.0 -0.976 11.8 172.3-156.1 139.7 20.2 5.8 4.6 88 88 A S + 0 0 111 -2,-0.3 -2,-0.0 2,-0.1 0, 0.0 -0.997 40.5 42.7-149.7 146.6 18.3 8.2 7.0 89 89 A G S S- 0 0 50 -2,-0.3 2,-0.1 2,-0.0 -1,-0.0 0.137 83.3 -69.4 96.7 146.4 18.5 11.8 8.0 90 90 A P - 0 0 124 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 -0.346 31.0-167.1 -69.8 149.1 19.0 15.0 6.1 91 91 A S + 0 0 129 -2,-0.1 2,-0.2 2,-0.0 -2,-0.0 -0.081 49.7 111.7-127.6 32.4 22.4 15.8 4.4 92 92 A S 0 0 110 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.661 360.0 360.0-105.5 162.2 21.9 19.5 3.6 93 93 A G 0 0 133 -2,-0.2 -1,-0.1 0, 0.0 -2,-0.0 -0.465 360.0 360.0 87.8 360.0 23.5 22.6 5.1