==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 14-APR-08 3CTR . COMPND 2 MOLECULE: POLY(A)-SPECIFIC RIBONUCLEASE PARN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.MONECKE,S.SCHELL,A.DICKMANNS,R.FICNER . 75 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5755.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 58.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 25.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 10.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 440 A G 0 0 85 0, 0.0 5,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -60.1 40.2 15.3 26.0 2 441 A P + 0 0 100 0, 0.0 51,-0.1 0, 0.0 3,-0.1 0.509 360.0 58.6 -77.4 -13.6 43.6 14.2 27.1 3 442 A L S S+ 0 0 57 1,-0.1 47,-2.5 50,-0.1 2,-0.3 0.593 113.2 35.3 -90.9 -12.1 41.9 10.8 26.8 4 443 A G E S-A 49 0A 11 45,-0.2 2,-0.4 49,-0.1 -1,-0.1 -0.991 77.0-136.4-137.1 143.4 41.1 11.2 23.1 5 444 A S E -A 48 0A 28 43,-2.9 43,-2.4 -2,-0.3 2,-0.4 -0.872 14.5-138.5-104.2 140.1 43.1 12.9 20.4 6 445 A D E +A 47 0A 114 -2,-0.4 2,-0.3 41,-0.2 41,-0.2 -0.774 26.8 177.7 -97.5 134.5 41.4 15.2 17.8 7 446 A H E -A 46 0A 68 39,-2.4 39,-2.4 -2,-0.4 2,-0.4 -0.971 22.2-154.5-136.0 147.0 42.5 14.9 14.2 8 447 A V E -A 45 0A 98 -2,-0.3 2,-0.3 37,-0.2 37,-0.2 -1.000 22.1-176.4-120.7 132.6 41.6 16.4 11.0 9 448 A L E -A 44 0A 70 35,-2.9 35,-2.6 -2,-0.4 2,-0.5 -0.838 23.1-126.7-123.3 158.5 42.3 14.4 7.8 10 449 A H E -A 43 0A 105 -2,-0.3 2,-0.4 33,-0.2 33,-0.2 -0.924 26.0-168.7-108.0 130.0 41.9 15.0 4.1 11 450 A V E -A 42 0A 16 31,-2.7 31,-1.9 -2,-0.5 2,-0.4 -0.958 11.0-167.3-121.7 133.3 40.0 12.4 2.0 12 451 A T E +A 41 0A 102 -2,-0.4 29,-0.2 29,-0.2 28,-0.0 -0.960 25.9 153.5-112.2 138.2 39.7 12.0 -1.8 13 452 A F - 0 0 12 27,-1.7 2,-0.1 -2,-0.4 -2,-0.0 -0.932 46.5 -68.5-154.2 169.5 37.0 9.7 -3.1 14 453 A P > - 0 0 61 0, 0.0 3,-2.0 0, 0.0 27,-0.0 -0.367 44.1-117.2 -67.1 151.5 34.7 9.0 -6.1 15 454 A K T 3 S+ 0 0 142 1,-0.3 26,-0.1 25,-0.1 25,-0.0 0.743 110.9 68.6 -58.4 -23.9 31.9 11.6 -6.8 16 455 A E T 3 S+ 0 0 122 24,-0.0 -1,-0.3 2,-0.0 24,-0.1 0.617 77.2 107.2 -72.4 -17.2 29.4 8.8 -6.2 17 456 A W < - 0 0 77 -3,-2.0 2,-0.2 22,-0.2 -4,-0.1 -0.342 51.0-165.4 -65.3 145.6 30.2 8.7 -2.4 18 457 A K >> - 0 0 132 -2,-0.0 4,-1.3 1,-0.0 3,-0.6 -0.624 41.6 -84.6-117.9 179.5 27.7 10.2 0.1 19 458 A T H 3> S+ 0 0 63 1,-0.2 4,-2.4 -2,-0.2 3,-0.3 0.891 125.2 58.6 -48.7 -45.9 27.9 11.1 3.8 20 459 A S H 3> S+ 0 0 62 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.824 100.2 55.6 -61.2 -37.1 27.2 7.5 4.8 21 460 A D H <> S+ 0 0 52 -3,-0.6 4,-2.7 2,-0.2 -1,-0.2 0.892 110.1 45.3 -61.7 -42.2 30.3 6.2 3.0 22 461 A L H X S+ 0 0 0 -4,-1.3 4,-2.1 -3,-0.3 -2,-0.2 0.912 112.5 51.1 -71.0 -40.6 32.5 8.6 4.9 23 462 A Y H < S+ 0 0 119 -4,-2.4 -2,-0.2 2,-0.2 -1,-0.2 0.902 113.6 45.8 -57.4 -43.9 30.8 7.7 8.2 24 463 A Q H >< S+ 0 0 127 -4,-2.5 3,-1.6 1,-0.2 -2,-0.2 0.932 110.6 52.6 -63.9 -48.8 31.3 3.9 7.4 25 464 A L H 3< S+ 0 0 96 -4,-2.7 3,-0.3 1,-0.3 -2,-0.2 0.875 118.3 37.0 -54.6 -42.1 34.9 4.5 6.3 26 465 A F T >< S+ 0 0 20 -4,-2.1 3,-2.3 1,-0.2 -1,-0.3 0.109 77.9 120.1-100.4 21.9 35.7 6.2 9.6 27 466 A S T < + 0 0 91 -3,-1.6 -1,-0.2 1,-0.3 -2,-0.1 0.682 64.1 69.8 -65.9 -14.9 33.5 4.1 11.9 28 467 A A T 3 S+ 0 0 89 -3,-0.3 -1,-0.3 -4,-0.2 2,-0.2 0.674 98.5 65.9 -69.5 -15.0 36.5 3.0 14.0 29 468 A F S < S- 0 0 65 -3,-2.3 3,-0.2 19,-0.1 2,-0.2 -0.521 77.1-122.8-107.7 169.8 36.6 6.7 15.3 30 469 A G E S+B 47 0A 31 17,-2.9 17,-2.5 1,-0.2 -2,-0.0 -0.635 79.0 16.8-107.6 167.8 34.5 9.0 17.4 31 470 A N E S- 0 0 108 15,-0.2 2,-0.4 -2,-0.2 -1,-0.2 0.850 75.6-169.9 42.0 54.9 32.9 12.5 16.8 32 471 A I E + 0 0 29 -3,-0.2 2,-0.4 14,-0.1 14,-0.2 -0.664 9.6 179.1 -82.6 130.2 33.2 12.4 13.0 33 472 A Q E -B 45 0A 104 12,-2.2 12,-2.7 -2,-0.4 2,-0.5 -0.996 16.4-147.2-132.1 124.3 32.4 15.6 11.2 34 473 A I E -B 44 0A 28 -2,-0.4 2,-0.6 10,-0.2 10,-0.2 -0.836 8.9-170.1 -96.1 126.8 32.7 16.0 7.4 35 474 A S E -B 43 0A 70 8,-3.2 8,-2.6 -2,-0.5 -2,-0.0 -0.893 23.8-142.5-111.7 94.6 33.7 19.4 6.0 36 475 A W E +B 42 0A 120 -2,-0.6 6,-0.3 6,-0.2 3,-0.1 -0.360 24.7 177.6 -62.8 135.9 33.1 19.0 2.2 37 476 A I E - 0 0 75 4,-2.3 2,-0.2 1,-0.4 5,-0.2 0.786 63.2 -42.8 -98.9 -54.0 35.6 20.7 -0.1 38 477 A D E > S-B 41 0A 85 3,-1.8 3,-0.9 0, 0.0 -1,-0.4 -0.763 81.0 -56.1-156.9-157.6 34.2 19.6 -3.5 39 478 A D T 3 S+ 0 0 124 1,-0.2 -22,-0.2 -2,-0.2 3,-0.0 0.785 132.4 27.8 -66.3 -30.1 32.6 16.6 -5.3 40 479 A T T 3 S+ 0 0 59 -24,-0.1 -27,-1.7 -28,-0.0 2,-0.3 0.053 117.6 50.8-125.5 22.2 35.5 14.3 -4.7 41 480 A S E < +AB 12 38A 10 -3,-0.9 -4,-2.3 -29,-0.2 -3,-1.8 -0.990 46.3 164.3-162.0 155.2 37.1 15.6 -1.5 42 481 A A E -AB 11 36A 0 -31,-1.9 -31,-2.7 -2,-0.3 2,-0.4 -0.971 34.5-117.5-159.2 153.4 36.4 16.6 2.2 43 482 A F E -AB 10 35A 96 -8,-2.6 -8,-3.2 -2,-0.3 2,-0.4 -0.823 30.8-159.5 -89.8 148.8 38.2 17.2 5.4 44 483 A V E -AB 9 34A 0 -35,-2.6 -35,-2.9 -2,-0.4 2,-0.4 -0.996 3.4-161.9-129.1 125.3 37.1 14.8 8.2 45 484 A S E +AB 8 33A 31 -12,-2.7 -12,-2.2 -2,-0.4 2,-0.3 -0.871 22.0 157.7-105.3 148.0 37.6 15.6 11.8 46 485 A L E -A 7 0A 5 -39,-2.4 -39,-2.4 -2,-0.4 2,-0.4 -0.931 37.3-116.2-157.2 171.3 37.4 12.8 14.4 47 486 A S E -AB 6 30A 30 -17,-2.5 -17,-2.9 -2,-0.3 -41,-0.2 -0.969 21.2-161.8-122.6 135.5 38.4 11.7 17.9 48 487 A Q E -A 5 0A 70 -43,-2.4 -43,-2.9 -2,-0.4 -19,-0.1 -0.981 23.9-120.9-119.2 122.5 40.7 8.7 18.4 49 488 A P E -A 4 0A 68 0, 0.0 2,-0.9 0, 0.0 -45,-0.2 -0.389 16.6-141.4 -59.8 137.8 40.8 7.0 21.9 50 489 A E > - 0 0 49 -47,-2.5 4,-2.5 1,-0.2 5,-0.2 -0.842 18.4-171.7-103.0 92.3 44.3 7.1 23.5 51 490 A Q H > S+ 0 0 139 -2,-0.9 4,-2.6 1,-0.2 -1,-0.2 0.824 80.0 50.5 -63.5 -38.0 44.3 3.7 25.0 52 491 A V H > S+ 0 0 105 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.941 113.0 46.0 -61.9 -48.9 47.6 4.1 27.0 53 492 A K H > S+ 0 0 113 1,-0.2 4,-2.9 2,-0.2 -2,-0.2 0.876 113.4 50.9 -62.6 -37.2 46.4 7.4 28.5 54 493 A I H X S+ 0 0 50 -4,-2.5 4,-3.3 2,-0.2 5,-0.2 0.939 109.2 49.5 -66.8 -45.9 43.0 5.8 29.3 55 494 A A H X S+ 0 0 44 -4,-2.6 4,-1.6 2,-0.2 12,-0.2 0.913 114.0 46.7 -58.3 -44.9 44.7 2.8 31.0 56 495 A V H X S+ 0 0 25 -4,-2.5 4,-0.6 2,-0.2 11,-0.4 0.957 114.9 45.9 -58.5 -53.7 46.8 5.2 33.1 57 496 A N H >< S+ 0 0 45 -4,-2.9 3,-1.8 1,-0.2 4,-0.3 0.945 110.2 52.8 -57.0 -49.4 43.9 7.5 34.0 58 497 A T H >< S+ 0 0 65 -4,-3.3 3,-1.9 1,-0.3 -1,-0.2 0.822 97.0 68.2 -59.8 -31.7 41.6 4.6 34.9 59 498 A S H >< S+ 0 0 4 -4,-1.6 3,-1.5 1,-0.3 6,-0.3 0.745 86.4 69.0 -58.6 -25.7 44.3 3.2 37.3 60 499 A K T << S+ 0 0 118 -3,-1.8 -1,-0.3 -4,-0.6 -2,-0.2 0.707 91.1 61.1 -66.2 -19.7 43.7 6.3 39.6 61 500 A Y T < S+ 0 0 175 -3,-1.9 2,-0.5 -4,-0.3 -1,-0.3 0.524 96.9 71.4 -85.8 -5.8 40.2 4.9 40.4 62 501 A A < - 0 0 25 -3,-1.5 3,-0.3 3,-0.3 -1,-0.1 -0.953 60.6-165.6-115.3 122.5 41.9 1.8 41.9 63 502 A E S S+ 0 0 186 -2,-0.5 -1,-0.1 1,-0.2 -4,-0.0 0.840 87.9 59.8 -69.5 -35.5 43.8 1.9 45.2 64 503 A S S S+ 0 0 117 1,-0.1 2,-0.3 0, 0.0 -1,-0.2 0.743 111.9 26.0 -68.1 -27.5 45.4 -1.5 44.6 65 504 A Y - 0 0 109 -6,-0.3 2,-0.3 -3,-0.3 -3,-0.3 -0.972 56.7-166.4-141.7 153.3 47.2 -0.7 41.4 66 505 A R - 0 0 176 -2,-0.3 2,-0.4 -5,-0.1 -10,-0.1 -0.982 4.9-161.6-141.3 128.2 48.7 2.3 39.5 67 506 A I + 0 0 74 -11,-0.4 2,-0.3 -2,-0.3 -8,-0.1 -0.912 19.2 169.8-106.1 133.9 49.8 2.6 35.8 68 507 A Q - 0 0 78 -2,-0.4 2,-0.0 -9,-0.0 -2,-0.0 -0.978 34.6-105.8-138.6 156.8 52.1 5.4 34.8 69 508 A T > - 0 0 52 -2,-0.3 4,-2.3 1,-0.1 5,-0.2 -0.348 36.7-109.4 -72.9 160.9 54.2 6.4 31.8 70 509 A Y H > S+ 0 0 168 1,-0.2 4,-1.9 2,-0.2 5,-0.1 0.905 120.8 55.0 -57.3 -41.2 58.0 6.0 31.9 71 510 A A H > S+ 0 0 74 1,-0.2 4,-2.9 2,-0.2 -1,-0.2 0.906 109.1 45.6 -56.7 -46.9 58.3 9.8 31.9 72 511 A E H 4 S+ 0 0 69 2,-0.2 -1,-0.2 1,-0.2 -2,-0.2 0.863 109.2 56.5 -65.6 -37.6 56.0 10.1 35.0 73 512 A Y H < S+ 0 0 141 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.870 112.9 41.8 -59.7 -39.4 57.9 7.2 36.7 74 513 A M H < 0 0 128 -4,-1.9 -2,-0.2 -5,-0.2 -1,-0.2 0.962 360.0 360.0 -68.6 -56.8 61.1 9.3 36.2 75 514 A G < 0 0 99 -4,-2.9 -3,-0.1 -5,-0.1 -4,-0.0 0.523 360.0 360.0 -76.1 360.0 59.6 12.7 37.2