==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 26-MAY-05 2CUB . COMPND 2 MOLECULE: CYTOPLASMIC PROTEIN NCK1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.OHNISHI,T.KIGAWA,M.SATO,T.TOMIZAWA,S.KOSHIBA,M.INOUE, . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6934.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 62.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 28.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 17 19.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 129 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 100.0 -8.2 -38.9 6.9 2 2 A S - 0 0 128 2,-0.0 2,-0.7 0, 0.0 0, 0.0 -0.967 360.0-110.3-155.8 167.5 -8.1 -35.1 6.8 3 3 A S - 0 0 114 -2,-0.3 2,-1.4 3,-0.0 3,-0.3 -0.873 24.4-152.3-110.4 101.8 -9.2 -32.0 8.6 4 4 A G + 0 0 84 -2,-0.7 3,-0.2 1,-0.2 -2,-0.0 -0.571 42.5 137.8 -75.5 93.6 -12.0 -30.1 6.8 5 5 A S + 0 0 117 -2,-1.4 2,-0.9 1,-0.2 -1,-0.2 0.859 69.2 32.2-100.1 -58.8 -11.4 -26.5 7.9 6 6 A S - 0 0 49 -3,-0.3 2,-1.9 1,-0.1 -1,-0.2 -0.762 64.1-179.0-106.0 87.1 -11.8 -24.4 4.8 7 7 A G + 0 0 81 -2,-0.9 -1,-0.1 -3,-0.2 -3,-0.0 -0.299 54.4 86.1 -81.6 55.0 -14.4 -26.1 2.7 8 8 A D S S- 0 0 80 -2,-1.9 -2,-0.1 2,-0.2 2,-0.0 -0.987 81.4 -93.1-151.2 157.5 -14.2 -23.4 -0.1 9 9 A P S S+ 0 0 121 0, 0.0 2,-0.0 0, 0.0 -2,-0.0 -0.286 85.8 16.7 -69.7 155.5 -12.2 -22.6 -3.2 10 10 A G S S- 0 0 58 2,-0.0 2,-0.3 39,-0.0 -2,-0.2 -0.279 77.5-113.2 79.0-168.3 -9.2 -20.3 -3.1 11 11 A E - 0 0 126 -2,-0.0 2,-0.7 2,-0.0 38,-0.2 -0.980 18.3-101.8-165.0 156.3 -7.2 -19.3 0.0 12 12 A R - 0 0 120 -2,-0.3 2,-0.6 36,-0.1 36,-0.1 -0.766 34.7-168.1 -89.6 113.0 -6.4 -16.3 2.3 13 13 A L B +A 47 0A 99 -2,-0.7 34,-1.6 34,-0.6 2,-0.2 -0.894 23.4 142.9-106.0 115.0 -2.9 -15.0 1.6 14 14 A Y + 0 0 139 -2,-0.6 32,-0.3 32,-0.2 30,-0.0 -0.789 46.9 40.4-138.1-179.5 -1.5 -12.5 4.1 15 15 A D + 0 0 104 -2,-0.2 31,-0.2 30,-0.1 -1,-0.2 0.860 68.8 143.4 42.3 43.5 1.7 -11.5 5.8 16 16 A L - 0 0 51 29,-1.8 29,-0.2 -3,-0.1 -1,-0.1 0.921 40.6-158.1 -76.3 -46.7 3.4 -12.0 2.4 17 17 A N + 0 0 95 27,-1.5 28,-0.2 1,-0.2 27,-0.1 0.864 27.4 166.1 68.9 36.9 5.9 -9.1 2.8 18 18 A M E -B 44 0A 57 26,-1.9 26,-3.2 55,-0.1 2,-0.4 -0.757 36.7-125.2 -90.6 123.5 6.3 -8.9 -1.0 19 19 A P E -B 43 0A 21 0, 0.0 54,-1.6 0, 0.0 53,-0.9 -0.512 32.9-172.2 -69.7 122.1 8.1 -5.8 -2.3 20 20 A A E -BC 42 71A 0 22,-2.8 22,-2.0 -2,-0.4 2,-0.5 -0.737 19.7-130.9-114.0 163.4 6.0 -4.0 -4.9 21 21 A Y E -BC 41 70A 89 49,-2.3 49,-1.0 -2,-0.3 2,-0.9 -0.947 17.7-133.4-120.0 113.9 6.7 -1.0 -7.2 22 22 A V E +BC 40 69A 0 18,-1.4 17,-2.2 -2,-0.5 18,-0.6 -0.497 27.0 175.5 -66.7 102.1 4.2 1.8 -7.4 23 23 A K S S+ 0 0 74 45,-2.6 2,-0.4 -2,-0.9 46,-0.2 0.756 71.9 30.3 -79.0 -25.9 3.9 2.4 -11.2 24 24 A F S S- 0 0 98 44,-1.0 2,-0.3 -3,-0.1 -1,-0.2 -0.993 88.1-114.5-139.2 130.2 1.1 4.9 -10.7 25 25 A N - 0 0 101 -2,-0.4 2,-0.4 -3,-0.1 12,-0.3 -0.447 33.5-151.0 -64.2 121.0 0.5 7.3 -7.8 26 26 A Y - 0 0 38 -2,-0.3 2,-0.8 10,-0.1 10,-0.3 -0.792 3.7-145.4 -98.9 137.0 -2.7 6.4 -6.0 27 27 A M - 0 0 152 -2,-0.4 2,-0.2 8,-0.2 8,-0.1 -0.855 17.9-162.5-104.8 102.7 -4.8 8.9 -4.2 28 28 A A + 0 0 25 -2,-0.8 7,-0.1 1,-0.1 3,-0.1 -0.489 18.0 177.7 -82.4 152.9 -6.5 7.4 -1.1 29 29 A E + 0 0 189 -2,-0.2 2,-0.4 1,-0.1 -1,-0.1 0.580 62.9 66.4-124.2 -28.5 -9.4 9.1 0.6 30 30 A R S > S- 0 0 185 1,-0.1 3,-1.9 4,-0.0 -1,-0.1 -0.799 81.8-124.8-102.1 141.6 -10.3 6.6 3.4 31 31 A E T 3 S+ 0 0 149 -2,-0.4 -1,-0.1 1,-0.3 -3,-0.0 0.791 114.7 59.3 -50.8 -29.1 -8.0 5.9 6.4 32 32 A D T 3 S+ 0 0 76 30,-0.1 31,-2.2 2,-0.1 -1,-0.3 0.814 97.6 72.4 -70.6 -31.0 -8.3 2.3 5.3 33 33 A E B < S-d 63 0A 32 -3,-1.9 2,-0.4 29,-0.3 31,-0.2 -0.555 76.8-138.7 -86.6 151.2 -6.8 3.1 1.9 34 34 A L - 0 0 6 29,-2.1 2,-0.8 -2,-0.2 28,-0.1 -0.880 11.4-127.1-112.8 143.0 -3.1 4.0 1.3 35 35 A S - 0 0 60 -2,-0.4 -8,-0.2 -8,-0.1 2,-0.2 -0.781 28.6-161.7 -91.6 110.7 -1.7 6.7 -0.9 36 36 A L - 0 0 3 -2,-0.8 2,-0.4 -10,-0.3 -10,-0.1 -0.487 5.2-145.1 -88.5 160.6 0.9 5.3 -3.3 37 37 A I > - 0 0 81 -12,-0.3 3,-1.2 -2,-0.2 -15,-0.2 -0.982 19.9-118.2-132.4 123.0 3.5 7.3 -5.2 38 38 A K T 3 S+ 0 0 126 -2,-0.4 -15,-0.2 1,-0.2 3,-0.1 -0.376 102.0 33.5 -59.0 120.2 4.7 6.5 -8.7 39 39 A G T 3 S+ 0 0 46 -17,-2.2 -1,-0.2 1,-0.4 2,-0.2 0.561 102.0 94.2 108.5 13.9 8.5 5.9 -8.4 40 40 A T E < -B 22 0A 29 -3,-1.2 -18,-1.4 -18,-0.6 -1,-0.4 -0.662 65.3-121.4-125.8-178.4 8.5 4.2 -5.0 41 41 A K E -B 21 0A 84 -20,-0.2 -20,-0.2 -2,-0.2 2,-0.2 -0.991 22.3-172.4-132.4 137.7 8.4 0.8 -3.5 42 42 A V E -B 20 0A 1 -22,-2.0 -22,-2.8 -2,-0.4 2,-0.6 -0.701 25.2-118.4-120.8 173.8 5.9 -0.8 -1.0 43 43 A I E -BE 19 56A 59 13,-1.7 13,-1.2 -24,-0.2 2,-0.2 -0.888 24.0-146.5-119.8 101.1 5.6 -4.0 1.0 44 44 A V E +BE 18 55A 0 -26,-3.2 -26,-1.9 -2,-0.6 -27,-1.5 -0.461 27.2 164.1 -67.1 128.4 2.6 -6.1 0.2 45 45 A M E + 0 0 65 9,-3.0 -29,-1.8 1,-0.3 2,-0.3 0.695 63.4 27.1-113.4 -36.3 1.2 -7.9 3.3 46 46 A E E - E 0 54A 39 8,-2.7 8,-2.3 -32,-0.3 2,-0.4 -0.895 60.2-159.8-129.1 158.8 -2.2 -9.0 2.1 47 47 A K E -AE 13 53A 36 -34,-1.6 2,-0.7 -2,-0.3 -34,-0.6 -0.964 7.9-151.1-143.8 123.1 -3.9 -9.8 -1.2 48 48 A C > - 0 0 45 4,-2.5 3,-2.3 -2,-0.4 4,-0.1 -0.837 17.5-138.5 -97.6 115.0 -7.6 -9.8 -2.0 49 49 A S T 3 S+ 0 0 133 -2,-0.7 -1,-0.2 1,-0.3 4,-0.0 0.816 102.4 69.5 -35.5 -40.9 -8.6 -12.2 -4.8 50 50 A D T 3 S- 0 0 151 1,-0.1 -1,-0.3 2,-0.1 3,-0.1 0.910 123.7 -98.1 -46.4 -51.1 -10.8 -9.4 -6.0 51 51 A G S < S+ 0 0 27 -3,-2.3 15,-1.1 1,-0.4 16,-0.2 0.104 86.1 115.4 153.0 -26.7 -7.8 -7.3 -7.0 52 52 A W E - F 0 65A 109 13,-0.2 -4,-2.5 14,-0.1 -1,-0.4 -0.480 47.6-156.7 -73.2 139.6 -7.2 -4.9 -4.2 53 53 A W E -EF 47 64A 26 11,-2.9 11,-2.8 -6,-0.2 2,-0.4 -0.704 8.3-144.6-113.8 166.7 -3.9 -5.3 -2.3 54 54 A R E +EF 46 63A 105 -8,-2.3 -9,-3.0 9,-0.2 -8,-2.7 -0.922 35.9 136.1-137.2 110.1 -2.8 -4.3 1.2 55 55 A G E -EF 44 62A 0 7,-1.0 7,-1.8 -2,-0.4 2,-0.3 -0.647 44.0 -99.4-135.8-167.4 0.8 -3.2 1.9 56 56 A S E -EF 43 61A 25 -13,-1.2 -13,-1.7 5,-0.2 2,-0.3 -0.880 20.0-169.2-122.9 154.9 2.8 -0.6 3.8 57 57 A Y E > S- F 0 60A 49 3,-1.2 3,-1.1 -2,-0.3 -15,-0.1 -0.836 75.8 -20.3-148.0 105.2 4.5 2.7 2.7 58 58 A N T 3 S- 0 0 156 -2,-0.3 3,-0.1 1,-0.3 -16,-0.0 0.863 131.4 -45.3 66.4 36.6 7.0 4.6 4.9 59 59 A G T 3 S+ 0 0 70 1,-0.4 -1,-0.3 0, 0.0 2,-0.1 0.260 117.9 117.8 91.0 -12.6 5.6 2.9 8.0 60 60 A Q E < - F 0 57A 118 -3,-1.1 -3,-1.2 2,-0.0 -1,-0.4 -0.365 47.8-156.2 -84.1 166.3 2.0 3.4 6.9 61 61 A V E + F 0 56A 65 -5,-0.2 2,-0.3 -28,-0.1 -5,-0.2 -0.994 28.9 113.6-147.5 137.5 -0.5 0.7 6.1 62 62 A G E - F 0 55A 2 -7,-1.8 -7,-1.0 -2,-0.3 2,-0.4 -0.971 58.1 -66.1-176.8-172.9 -3.7 0.6 4.0 63 63 A W E +dF 33 54A 63 -31,-2.2 -29,-2.1 -2,-0.3 -9,-0.2 -0.831 47.5 167.5-102.3 135.7 -5.4 -0.8 0.9 64 64 A F E - F 0 53A 0 -11,-2.8 -11,-2.9 -2,-0.4 2,-0.3 -0.991 40.8 -95.0-146.1 151.8 -4.3 0.0 -2.6 65 65 A P E >> - F 0 52A 13 0, 0.0 3,-1.6 0, 0.0 4,-0.7 -0.511 22.5-151.8 -69.8 122.7 -4.9 -1.2 -6.2 66 66 A S G >4 S+ 0 0 25 -15,-1.1 3,-0.6 -2,-0.3 -14,-0.1 0.809 92.6 73.1 -63.4 -29.9 -2.4 -3.8 -7.3 67 67 A N G 34 S+ 0 0 129 1,-0.3 -1,-0.3 -16,-0.2 -15,-0.1 0.741 97.5 50.5 -56.6 -22.4 -2.9 -2.7 -10.9 68 68 A Y G <4 S+ 0 0 92 -3,-1.6 -45,-2.6 -45,-0.1 -44,-1.0 0.801 113.0 48.8 -85.4 -32.6 -1.0 0.4 -9.9 69 69 A V E << S-C 22 0A 4 -4,-0.7 2,-0.4 -3,-0.6 -47,-0.2 -0.585 71.4-146.8-104.5 168.5 1.9 -1.5 -8.4 70 70 A T E -C 21 0A 53 -49,-1.0 -49,-2.3 -2,-0.2 2,-1.2 -0.999 28.0-106.9-140.2 136.5 4.0 -4.3 -9.7 71 71 A E E +C 20 0A 100 -2,-0.4 -51,-0.2 -51,-0.2 -5,-0.0 -0.430 40.1 174.8 -62.8 94.7 5.7 -7.3 -7.9 72 72 A E - 0 0 90 -2,-1.2 -1,-0.2 -53,-0.9 -52,-0.2 0.937 20.8-165.4 -68.5 -48.2 9.4 -6.1 -8.2 73 73 A G - 0 0 43 -54,-1.6 2,-0.3 -3,-0.1 -55,-0.1 0.459 9.4-142.7 70.4 143.2 10.8 -9.0 -6.1 74 74 A D - 0 0 111 2,-0.0 -1,-0.1 3,-0.0 -2,-0.0 -0.954 4.2-150.6-146.2 122.7 14.2 -9.1 -4.6 75 75 A S - 0 0 85 -2,-0.3 2,-0.5 1,-0.1 5,-0.1 -0.705 30.3-105.9 -94.7 143.1 16.6 -12.1 -4.2 76 76 A P - 0 0 60 0, 0.0 2,-0.2 0, 0.0 5,-0.1 -0.531 35.5-127.9 -69.8 114.3 19.1 -12.3 -1.4 77 77 A L S S+ 0 0 174 -2,-0.5 2,-0.7 1,-0.2 3,-0.0 -0.426 84.4 15.4 -65.2 130.0 22.6 -11.7 -2.8 78 78 A G S S+ 0 0 77 -2,-0.2 2,-0.4 3,-0.0 -1,-0.2 -0.742 119.8 44.3 112.6 -84.8 25.0 -14.5 -1.8 79 79 A D S S- 0 0 145 -2,-0.7 3,-0.1 1,-0.1 0, 0.0 -0.841 93.2-101.9-102.6 134.1 23.0 -17.5 -0.6 80 80 A H - 0 0 171 -2,-0.4 -1,-0.1 1,-0.1 -3,-0.1 -0.139 48.6 -95.5 -50.0 142.3 19.9 -18.7 -2.5 81 81 A V + 0 0 76 1,-0.1 -1,-0.1 -5,-0.1 3,-0.1 -0.196 55.2 152.2 -59.8 152.4 16.7 -17.6 -0.8 82 82 A G + 0 0 54 1,-0.2 -1,-0.1 -3,-0.1 2,-0.1 0.420 39.4 88.8-145.3 -59.7 15.0 -20.1 1.6 83 83 A S S S+ 0 0 130 1,-0.2 -1,-0.2 3,-0.0 3,-0.1 -0.316 84.1 43.5 -55.6 122.0 12.9 -18.7 4.3 84 84 A G S S+ 0 0 57 -2,-0.1 2,-0.7 -3,-0.1 -1,-0.2 -0.714 87.8 66.3 148.7 -93.6 9.4 -18.3 3.0 85 85 A P - 0 0 117 0, 0.0 2,-0.6 0, 0.0 -1,-0.0 -0.536 61.0-172.2 -69.7 109.4 7.7 -21.0 0.9 86 86 A S + 0 0 111 -2,-0.7 2,-0.3 -3,-0.1 -3,-0.0 -0.918 21.6 135.5-110.0 117.3 7.3 -24.0 3.2 87 87 A S 0 0 127 -2,-0.6 0, 0.0 1,-0.1 0, 0.0 -0.955 360.0 360.0-151.5 167.5 6.1 -27.3 1.6 88 88 A G 0 0 130 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 0.397 360.0 360.0-125.7 360.0 6.7 -31.0 1.6