==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 26-MAY-05 2CUE . COMPND 2 MOLECULE: PAIRED BOX PROTEIN PAX6; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.OHNISHI,T.KIGAWA,N.TOCHIO,T.TOMIZAWA,S.KOSHIBA,M.INOUE, . 80 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7322.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 72.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 41 51.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 136 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 166.8 14.4 7.4 26.3 2 2 A S + 0 0 137 1,-0.3 2,-0.5 2,-0.0 0, 0.0 0.860 360.0 20.5-100.4 -64.3 14.6 11.1 26.1 3 3 A S S S+ 0 0 119 2,-0.0 -1,-0.3 1,-0.0 2,-0.1 -0.943 75.2 147.2-115.5 117.8 14.0 12.2 22.4 4 4 A G - 0 0 76 -2,-0.5 2,-0.3 -3,-0.1 -2,-0.0 -0.126 27.9-135.9-120.5-142.9 12.2 9.7 20.1 5 5 A S - 0 0 101 -2,-0.1 2,-0.4 3,-0.0 3,-0.2 -0.976 11.0-116.9-173.5 169.4 9.9 9.9 17.1 6 6 A S S S- 0 0 107 -2,-0.3 -2,-0.0 1,-0.3 0, 0.0 -0.984 83.0 -1.2-127.2 130.0 6.8 8.4 15.5 7 7 A G S S+ 0 0 71 -2,-0.4 2,-0.4 1,-0.2 -1,-0.3 0.982 77.7 168.4 58.1 83.6 6.6 6.6 12.2 8 8 A Q - 0 0 141 -3,-0.2 2,-0.6 0, 0.0 -1,-0.2 -0.979 34.2-126.0-130.7 142.0 10.2 6.6 10.8 9 9 A R + 0 0 194 -2,-0.4 3,-0.1 1,-0.2 0, 0.0 -0.754 32.9 162.8 -89.4 122.1 11.8 4.8 7.9 10 10 A N - 0 0 122 -2,-0.6 2,-0.3 1,-0.4 -1,-0.2 0.816 65.2 -13.1-102.4 -47.3 14.9 2.8 8.9 11 11 A R - 0 0 182 0, 0.0 -1,-0.4 0, 0.0 2,-0.4 -0.987 56.5-139.8-155.0 158.8 15.4 0.4 6.0 12 12 A T - 0 0 97 -2,-0.3 -3,-0.0 1,-0.1 3,-0.0 -0.949 9.6-174.0-126.4 145.9 13.5 -1.0 3.0 13 13 A S + 0 0 103 -2,-0.4 -1,-0.1 2,-0.0 0, 0.0 0.851 68.6 63.6-100.2 -54.1 13.4 -4.5 1.5 14 14 A F S S- 0 0 37 1,-0.1 2,-0.3 2,-0.0 -2,-0.0 -0.118 81.5-119.1 -67.2 169.3 11.4 -4.1 -1.7 15 15 A T >> - 0 0 69 1,-0.1 4,-3.0 -3,-0.0 3,-1.8 -0.861 18.8-115.3-115.3 149.3 12.7 -2.0 -4.7 16 16 A Q H 3> S+ 0 0 131 -2,-0.3 4,-2.6 1,-0.3 5,-0.2 0.835 119.2 57.9 -46.8 -36.7 11.2 1.1 -6.3 17 17 A E H 3> S+ 0 0 126 1,-0.2 4,-0.7 2,-0.2 -1,-0.3 0.843 113.0 38.4 -64.2 -34.3 10.8 -1.1 -9.4 18 18 A Q H <> S+ 0 0 33 -3,-1.8 4,-1.8 2,-0.2 -2,-0.2 0.819 114.2 54.5 -85.0 -34.6 8.7 -3.5 -7.4 19 19 A I H X S+ 0 0 38 -4,-3.0 4,-2.9 2,-0.2 5,-0.3 0.924 101.2 58.4 -64.9 -45.9 6.8 -0.9 -5.4 20 20 A E H X S+ 0 0 87 -4,-2.6 4,-1.5 1,-0.3 -1,-0.2 0.887 112.8 40.4 -50.9 -43.3 5.6 1.0 -8.5 21 21 A A H X S+ 0 0 7 -4,-0.7 4,-1.2 2,-0.2 -1,-0.3 0.811 114.4 52.9 -76.1 -31.5 3.9 -2.2 -9.7 22 22 A L H X S+ 0 0 0 -4,-1.8 4,-0.7 1,-0.2 -2,-0.2 0.787 110.7 47.7 -73.9 -28.2 2.7 -3.1 -6.2 23 23 A E H X S+ 0 0 115 -4,-2.9 4,-2.5 2,-0.2 -2,-0.2 0.837 107.5 54.8 -80.5 -35.3 1.2 0.4 -5.8 24 24 A K H < S+ 0 0 145 -4,-1.5 4,-0.4 -5,-0.3 -2,-0.2 0.826 110.8 46.3 -67.1 -32.0 -0.6 0.3 -9.2 25 25 A E H X S+ 0 0 20 -4,-1.2 4,-2.1 2,-0.2 -1,-0.2 0.732 113.1 50.1 -81.6 -24.3 -2.2 -3.0 -8.2 26 26 A F H < S+ 0 0 16 -4,-0.7 -2,-0.2 2,-0.2 -1,-0.1 0.877 100.0 61.6 -80.3 -41.0 -3.2 -1.6 -4.8 27 27 A E T < S+ 0 0 152 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.759 115.9 36.0 -56.8 -24.6 -4.8 1.6 -6.1 28 28 A R T 4 S+ 0 0 192 -4,-0.4 2,-0.4 1,-0.3 -2,-0.2 0.878 133.9 11.6 -94.1 -51.1 -7.2 -0.7 -7.9 29 29 A T < - 0 0 43 -4,-2.1 -1,-0.3 1,-0.1 -2,-0.1 -0.987 50.3-162.1-136.1 126.1 -7.7 -3.5 -5.5 30 30 A H S S+ 0 0 45 -2,-0.4 29,-0.1 1,-0.3 -1,-0.1 0.626 94.9 44.9 -77.6 -13.4 -6.6 -3.7 -1.8 31 31 A Y S S- 0 0 129 -5,-0.1 2,-0.7 25,-0.0 -1,-0.3 -0.686 76.8-164.9-134.2 80.6 -7.0 -7.5 -1.9 32 32 A P - 0 0 1 0, 0.0 5,-0.4 0, 0.0 23,-0.1 -0.537 20.4-136.5 -69.7 107.9 -5.5 -8.9 -5.1 33 33 A D >> - 0 0 120 -2,-0.7 4,-2.9 3,-0.1 3,-1.5 0.164 36.7 -83.2 -52.4 179.7 -6.8 -12.5 -5.4 34 34 A V H 3> S+ 0 0 61 1,-0.3 4,-2.3 2,-0.2 5,-0.3 0.842 132.7 59.5 -57.7 -34.5 -4.5 -15.4 -6.4 35 35 A F H 3> S+ 0 0 173 2,-0.2 4,-0.7 1,-0.2 -1,-0.3 0.728 113.4 38.8 -67.1 -21.4 -5.0 -14.4 -10.1 36 36 A A H <> S+ 0 0 21 -3,-1.5 4,-2.6 2,-0.2 5,-0.3 0.880 115.8 47.0 -93.4 -50.5 -3.5 -11.0 -9.2 37 37 A R H X S+ 0 0 41 -4,-2.9 4,-2.0 -5,-0.4 -2,-0.2 0.867 116.0 48.4 -60.1 -37.5 -0.8 -11.9 -6.7 38 38 A E H X S+ 0 0 108 -4,-2.3 4,-1.0 -5,-0.3 5,-0.2 0.970 112.3 45.3 -67.5 -55.6 0.4 -14.6 -9.1 39 39 A R H >X S+ 0 0 207 -4,-0.7 4,-0.7 -5,-0.3 3,-0.5 0.894 117.6 45.8 -55.3 -42.6 0.4 -12.5 -12.3 40 40 A L H >X S+ 0 0 10 -4,-2.6 4,-2.3 1,-0.2 3,-0.7 0.863 97.1 72.9 -69.4 -36.9 2.2 -9.7 -10.3 41 41 A A H 3<>S+ 0 0 22 -4,-2.0 5,-2.4 1,-0.3 -1,-0.2 0.838 107.7 36.0 -45.6 -37.7 4.6 -12.1 -8.8 42 42 A A H <<5S+ 0 0 78 -4,-1.0 -1,-0.3 -3,-0.5 -2,-0.2 0.652 109.7 64.6 -90.5 -18.8 6.3 -12.3 -12.2 43 43 A K H <<5S+ 0 0 137 -4,-0.7 -2,-0.2 -3,-0.7 -1,-0.2 0.812 123.9 16.2 -73.2 -30.8 5.7 -8.7 -13.0 44 44 A I T <5S- 0 0 10 -4,-2.3 -2,-0.2 2,-0.1 -1,-0.2 0.283 107.2-115.1-123.0 5.0 8.0 -7.6 -10.1 45 45 A D T 5 + 0 0 143 -5,-0.4 -3,-0.2 1,-0.2 -4,-0.1 0.953 68.7 138.6 58.5 53.0 9.7 -10.9 -9.6 46 46 A L < - 0 0 19 -5,-2.4 -1,-0.2 -6,-0.3 2,-0.2 -0.954 58.1-101.9-130.7 149.1 8.3 -11.4 -6.1 47 47 A P >> - 0 0 70 0, 0.0 3,-1.6 0, 0.0 4,-1.5 -0.455 30.1-120.7 -69.8 134.6 7.0 -14.4 -4.2 48 48 A E H 3> S+ 0 0 68 1,-0.3 4,-1.0 2,-0.2 -10,-0.1 0.721 116.8 58.8 -46.2 -21.0 3.2 -14.6 -3.9 49 49 A A H 3> S+ 0 0 56 2,-0.2 4,-1.3 1,-0.1 -1,-0.3 0.880 100.7 52.0 -77.4 -40.6 3.9 -14.5 -0.2 50 50 A R H X> S+ 0 0 115 -3,-1.6 4,-2.3 1,-0.2 3,-0.7 0.953 104.6 55.4 -60.7 -52.4 5.7 -11.2 -0.3 51 51 A I H 3X S+ 0 0 0 -4,-1.5 4,-2.7 1,-0.3 5,-0.3 0.897 102.4 57.9 -47.1 -47.8 2.9 -9.4 -2.1 52 52 A Q H 3X S+ 0 0 80 -4,-1.0 4,-1.8 -5,-0.2 -1,-0.3 0.902 111.0 42.8 -50.7 -46.4 0.4 -10.5 0.6 53 53 A V H XX S+ 0 0 64 -4,-1.3 4,-2.3 -3,-0.7 3,-0.5 0.987 110.9 51.8 -64.9 -61.6 2.6 -8.7 3.2 54 54 A W H 3X S+ 0 0 8 -4,-2.3 4,-1.4 1,-0.3 -2,-0.2 0.861 114.8 45.6 -43.0 -43.3 3.3 -5.5 1.2 55 55 A F H 3X S+ 0 0 0 -4,-2.7 4,-2.0 -5,-0.3 -1,-0.3 0.857 109.6 56.0 -70.6 -36.2 -0.4 -5.2 0.7 56 56 A S H X S+ 0 0 48 -4,-1.4 4,-2.1 -5,-0.4 3,-1.5 0.942 95.2 59.5 -57.2 -51.0 -0.4 -0.9 3.1 59 59 A R H 3X S+ 0 0 56 -4,-2.0 4,-3.0 1,-0.3 5,-0.3 0.853 105.1 51.0 -46.3 -39.7 -4.0 -1.3 4.4 60 60 A A H 3X S+ 0 0 61 -4,-1.0 4,-1.0 -3,-0.4 -1,-0.3 0.798 111.1 47.6 -69.8 -29.1 -2.8 0.0 7.7 61 61 A K H X S+ 0 0 105 -4,-0.8 4,-1.4 2,-0.2 3,-0.8 0.976 104.9 62.0 -74.1 -59.4 -4.5 8.1 6.2 66 66 A E H 3X S+ 0 0 88 -4,-2.9 4,-1.2 1,-0.3 3,-0.3 0.808 105.4 53.0 -35.0 -39.8 -8.0 8.0 4.6 67 67 A K H >X S+ 0 0 125 -4,-0.7 4,-2.7 -5,-0.3 3,-0.8 0.951 97.5 61.3 -64.7 -51.2 -9.2 9.1 8.1 68 68 A L H