==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 26-MAY-05 2CUF . COMPND 2 MOLECULE: FLJ21616 PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.OHNISHI,T.KIGAWA,T.TOMIZAWA,S.KOSHIBA,M.INOUE,S.YOKOYAMA, . 95 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7784.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 53.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 43 45.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 115 0, 0.0 3,-0.1 0, 0.0 6,-0.1 0.000 360.0 360.0 360.0-173.4 13.2 -0.6 -2.0 2 2 A S - 0 0 129 1,-0.4 2,-0.3 2,-0.0 5,-0.1 0.815 360.0 -1.1-103.1 -48.1 13.3 0.0 -5.7 3 3 A S S S+ 0 0 102 3,-0.2 -1,-0.4 1,-0.1 3,-0.1 -0.998 101.5 37.9-148.2 143.6 9.7 1.1 -6.5 4 4 A G S S- 0 0 59 -2,-0.3 -1,-0.1 1,-0.1 89,-0.1 0.205 84.0 -90.8 94.5 143.7 6.5 1.6 -4.6 5 5 A S S S+ 0 0 77 89,-0.2 2,-0.3 2,-0.1 -1,-0.1 0.647 103.4 95.4 -61.4 -13.1 5.9 2.9 -1.1 6 6 A S + 0 0 51 -3,-0.1 -3,-0.2 1,-0.1 2,-0.2 -0.635 51.6 89.9 -83.6 135.5 6.2 -0.7 -0.0 7 7 A G + 0 0 28 -2,-0.3 3,-0.2 -6,-0.1 -1,-0.1 -0.615 10.5 126.5-177.0-119.3 9.6 -1.8 1.3 8 8 A R - 0 0 199 1,-0.2 -1,-0.1 -2,-0.2 -2,-0.0 0.793 55.5-160.7 37.9 34.2 11.3 -2.0 4.6 9 9 A G - 0 0 59 1,-0.1 2,-1.3 -3,-0.1 -1,-0.2 -0.188 14.0-130.8 -47.5 122.7 11.9 -5.6 3.8 10 10 A S - 0 0 98 1,-0.2 -1,-0.1 -3,-0.2 3,-0.1 -0.657 68.4 -56.0 -82.8 94.4 12.6 -7.5 7.0 11 11 A R S S+ 0 0 228 -2,-1.3 2,-0.3 1,-0.2 -1,-0.2 0.846 120.0 97.3 36.6 46.7 15.7 -9.5 6.1 12 12 A F - 0 0 41 47,-0.0 2,-0.3 2,-0.0 -1,-0.2 -0.942 55.3-155.4-151.8 170.8 13.7 -11.0 3.2 13 13 A T - 0 0 67 45,-1.0 2,-0.7 -2,-0.3 -3,-0.0 -0.993 15.2-133.8-154.3 147.7 13.0 -10.6 -0.5 14 14 A W - 0 0 65 -2,-0.3 2,-0.1 4,-0.0 45,-0.1 -0.903 23.2-148.8-109.0 110.8 10.3 -11.4 -3.0 15 15 A R > - 0 0 114 -2,-0.7 4,-2.4 44,-0.1 3,-0.2 -0.427 24.4-117.7 -75.7 150.2 11.4 -13.1 -6.2 16 16 A K H > S+ 0 0 159 1,-0.2 4,-1.5 2,-0.2 -1,-0.1 0.798 116.8 55.9 -56.0 -29.1 9.6 -12.5 -9.5 17 17 A E H > S+ 0 0 107 2,-0.2 4,-1.2 1,-0.2 -1,-0.2 0.922 110.7 40.9 -70.2 -45.7 8.8 -16.2 -9.5 18 18 A C H > S+ 0 0 2 -3,-0.2 4,-1.8 1,-0.2 -2,-0.2 0.774 113.4 56.0 -73.1 -26.9 7.2 -16.2 -6.0 19 19 A L H X S+ 0 0 40 -4,-2.4 4,-1.9 2,-0.2 -1,-0.2 0.841 103.4 53.9 -73.6 -34.4 5.4 -12.9 -6.9 20 20 A A H X S+ 0 0 61 -4,-1.5 4,-1.2 -5,-0.2 -2,-0.2 0.870 110.9 45.8 -67.5 -37.8 3.8 -14.4 -10.0 21 21 A V H X S+ 0 0 25 -4,-1.2 4,-2.0 2,-0.2 5,-0.2 0.901 111.0 51.6 -71.9 -42.5 2.4 -17.3 -8.0 22 22 A M H X S+ 0 0 0 -4,-1.8 4,-1.9 1,-0.2 -2,-0.2 0.889 109.0 51.1 -61.5 -40.5 1.1 -15.0 -5.2 23 23 A E H X S+ 0 0 106 -4,-1.9 4,-1.4 2,-0.2 -1,-0.2 0.836 107.1 55.4 -66.2 -33.3 -0.7 -12.8 -7.7 24 24 A S H X S+ 0 0 78 -4,-1.2 4,-1.2 2,-0.2 3,-0.4 0.952 110.1 42.8 -64.8 -51.3 -2.3 -15.8 -9.2 25 25 A Y H X S+ 0 0 46 -4,-2.0 4,-2.8 1,-0.2 -1,-0.2 0.858 111.2 56.7 -63.6 -36.1 -3.9 -17.0 -6.0 26 26 A F H < S+ 0 0 20 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.820 102.5 56.1 -65.1 -31.3 -4.9 -13.5 -5.1 27 27 A N H < S+ 0 0 138 -4,-1.4 -1,-0.2 -3,-0.4 -2,-0.2 0.852 115.1 37.0 -69.4 -35.3 -6.8 -13.2 -8.4 28 28 A E H < S+ 0 0 122 -4,-1.2 2,-0.3 1,-0.3 -2,-0.2 0.808 137.0 9.1 -85.3 -33.6 -8.9 -16.3 -7.5 29 29 A N < - 0 0 62 -4,-2.8 -1,-0.3 -5,-0.2 -2,-0.1 -0.935 53.3-157.8-152.9 125.2 -9.1 -15.5 -3.8 30 30 A Q S S+ 0 0 81 -2,-0.3 44,-0.1 1,-0.3 -1,-0.1 0.877 96.2 38.4 -68.0 -38.5 -8.1 -12.4 -1.8 31 31 A Y S S- 0 0 138 -6,-0.1 2,-0.4 -5,-0.1 -1,-0.3 -0.827 81.8-155.5-119.3 92.5 -7.9 -14.3 1.4 32 32 A P - 0 0 7 0, 0.0 5,-0.2 0, 0.0 -6,-0.0 -0.518 23.7-118.8 -69.7 120.5 -6.4 -17.8 0.8 33 33 A D > - 0 0 85 -2,-0.4 4,-2.5 3,-0.1 5,-0.2 0.166 36.5 -89.1 -47.6 175.3 -7.5 -20.3 3.6 34 34 A E H > S+ 0 0 153 1,-0.2 4,-1.5 2,-0.2 5,-0.1 0.940 131.5 41.7 -56.3 -51.0 -4.9 -21.9 5.8 35 35 A A H > S+ 0 0 61 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.871 112.5 55.5 -65.1 -37.8 -4.4 -24.8 3.4 36 36 A K H > S+ 0 0 38 1,-0.2 4,-2.5 2,-0.2 5,-0.3 0.885 103.8 54.5 -62.5 -39.8 -4.5 -22.5 0.4 37 37 A R H X S+ 0 0 52 -4,-2.5 4,-2.6 -5,-0.2 -1,-0.2 0.903 110.1 46.0 -61.1 -42.7 -1.7 -20.4 1.9 38 38 A E H X S+ 0 0 103 -4,-1.5 4,-2.6 2,-0.2 -1,-0.2 0.871 111.2 53.0 -68.3 -37.9 0.5 -23.5 2.2 39 39 A E H X S+ 0 0 129 -4,-2.1 4,-1.3 2,-0.2 -2,-0.2 0.927 115.8 38.5 -63.4 -46.6 -0.4 -24.7 -1.3 40 40 A I H X S+ 0 0 0 -4,-2.5 4,-1.6 2,-0.2 -2,-0.2 0.885 115.9 52.7 -71.7 -40.1 0.6 -21.3 -2.9 41 41 A A H X S+ 0 0 1 -4,-2.6 4,-1.7 -5,-0.3 20,-0.2 0.912 106.4 53.1 -61.9 -44.2 3.6 -20.9 -0.6 42 42 A N H X S+ 0 0 103 -4,-2.6 4,-1.8 1,-0.2 -1,-0.2 0.898 106.4 53.3 -58.6 -42.3 5.0 -24.3 -1.5 43 43 A A H X S+ 0 0 35 -4,-1.3 4,-2.6 1,-0.2 -1,-0.2 0.882 105.3 54.4 -60.8 -39.8 4.8 -23.5 -5.2 44 44 A C H X S+ 0 0 0 -4,-1.6 4,-0.9 1,-0.2 -1,-0.2 0.884 107.7 49.7 -62.1 -39.8 6.8 -20.3 -4.6 45 45 A N H X S+ 0 0 18 -4,-1.7 4,-2.3 16,-0.2 -1,-0.2 0.849 111.3 49.8 -68.0 -34.9 9.6 -22.3 -3.0 46 46 A A H < S+ 0 0 64 -4,-1.8 -2,-0.2 2,-0.2 -1,-0.2 0.933 105.1 54.8 -69.4 -47.6 9.6 -24.8 -5.9 47 47 A V H < S+ 0 0 68 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.750 119.7 36.0 -58.0 -23.4 9.8 -22.1 -8.6 48 48 A I H < S+ 0 0 15 -4,-0.9 -1,-0.2 -5,-0.2 -2,-0.2 0.728 92.9 102.9 -99.7 -30.0 12.9 -20.8 -6.7 49 49 A Q < - 0 0 78 -4,-2.3 5,-0.1 -5,-0.1 -4,-0.0 -0.377 58.9-160.1 -59.3 120.6 14.3 -24.2 -5.6 50 50 A K > - 0 0 119 -2,-0.2 3,-1.5 1,-0.0 2,-0.2 -0.767 23.4 -99.0-106.6 151.6 17.2 -25.0 -7.8 51 51 A P T 3 S+ 0 0 127 0, 0.0 3,-0.1 0, 0.0 -1,-0.0 -0.484 107.5 9.5 -69.8 128.9 18.8 -28.5 -8.5 52 52 A G T 3 S+ 0 0 78 1,-0.3 2,-0.3 -2,-0.2 0, 0.0 0.525 112.4 103.8 80.4 4.9 21.9 -29.1 -6.4 53 53 A K < - 0 0 111 -3,-1.5 2,-0.4 0, 0.0 -1,-0.3 -0.809 66.6-128.2-118.3 159.8 21.3 -26.0 -4.4 54 54 A K - 0 0 164 -2,-0.3 2,-0.2 -3,-0.1 0, 0.0 -0.913 21.0-127.8-111.6 133.0 20.0 -25.4 -0.9 55 55 A L - 0 0 56 -2,-0.4 2,-0.3 -5,-0.1 -6,-0.0 -0.497 23.2-149.8 -77.4 144.5 17.1 -23.0 -0.1 56 56 A S >> - 0 0 70 -2,-0.2 4,-2.5 1,-0.1 3,-1.8 -0.773 28.5-110.8-114.1 159.5 17.6 -20.3 2.5 57 57 A D T 34 S+ 0 0 122 1,-0.3 -1,-0.1 -2,-0.3 -2,-0.0 0.736 116.9 66.7 -58.0 -22.0 15.1 -18.6 4.9 58 58 A L T 34 S+ 0 0 81 1,-0.2 -45,-1.0 -46,-0.1 -1,-0.3 0.808 116.1 24.5 -69.4 -30.1 15.7 -15.5 2.8 59 59 A E T <4 S+ 0 0 42 -3,-1.8 -2,-0.2 -47,-0.1 -1,-0.2 0.565 96.7 115.2-108.0 -16.5 14.0 -17.2 -0.1 60 60 A R < - 0 0 124 -4,-2.5 2,-0.7 1,-0.1 -18,-0.1 -0.325 54.1-152.5 -58.7 131.5 11.9 -19.6 1.9 61 61 A V - 0 0 2 -20,-0.2 -16,-0.2 -19,-0.1 2,-0.1 -0.883 17.2-177.8-113.7 102.0 8.2 -18.9 1.5 62 62 A T > - 0 0 50 -2,-0.7 4,-1.9 1,-0.1 5,-0.2 -0.402 43.5-101.5 -91.7 171.2 6.1 -20.0 4.4 63 63 A S H > S+ 0 0 47 1,-0.2 4,-1.3 2,-0.2 5,-0.1 0.849 124.7 50.7 -59.7 -35.1 2.3 -19.9 4.9 64 64 A L H > S+ 0 0 101 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.883 105.5 55.1 -70.5 -39.6 2.8 -16.8 7.1 65 65 A K H > S+ 0 0 44 1,-0.2 4,-1.8 2,-0.2 -2,-0.2 0.891 106.0 52.2 -60.6 -40.9 5.0 -15.1 4.5 66 66 A V H X S+ 0 0 0 -4,-1.9 4,-2.4 1,-0.2 -1,-0.2 0.883 108.0 51.3 -63.3 -39.6 2.2 -15.4 1.9 67 67 A Y H X S+ 0 0 102 -4,-1.3 4,-2.9 1,-0.2 -1,-0.2 0.874 106.3 55.1 -65.8 -38.1 -0.3 -13.9 4.2 68 68 A N H X S+ 0 0 97 -4,-1.9 4,-1.5 2,-0.2 -1,-0.2 0.909 111.6 43.4 -61.8 -43.6 2.0 -10.9 4.9 69 69 A W H X S+ 0 0 47 -4,-1.8 4,-1.4 2,-0.2 -2,-0.2 0.914 115.1 48.7 -68.7 -44.2 2.3 -10.2 1.1 70 70 A F H X S+ 0 0 0 -4,-2.4 4,-2.6 1,-0.2 3,-0.4 0.924 109.6 51.9 -61.9 -46.2 -1.5 -10.7 0.5 71 71 A A H X S+ 0 0 25 -4,-2.9 4,-2.5 1,-0.2 5,-0.3 0.862 105.6 56.3 -59.0 -37.0 -2.4 -8.4 3.4 72 72 A N H X S+ 0 0 48 -4,-1.5 4,-1.5 -5,-0.2 -1,-0.2 0.861 110.4 44.6 -63.8 -36.3 -0.2 -5.7 2.0 73 73 A R H X S+ 0 0 119 -4,-1.4 4,-2.8 -3,-0.4 5,-0.3 0.935 112.8 49.1 -73.5 -48.6 -2.1 -5.8 -1.3 74 74 A R H X S+ 0 0 22 -4,-2.6 4,-2.5 1,-0.2 5,-0.2 0.914 117.3 41.8 -57.3 -45.4 -5.5 -5.9 0.2 75 75 A K H X S+ 0 0 96 -4,-2.5 4,-2.3 -5,-0.2 -1,-0.2 0.830 114.0 53.2 -71.6 -32.7 -4.7 -3.0 2.5 76 76 A E H X S+ 0 0 90 -4,-1.5 4,-0.9 -5,-0.3 -2,-0.2 0.865 115.4 39.6 -70.1 -37.1 -2.9 -1.2 -0.4 77 77 A I H X S+ 0 0 54 -4,-2.8 4,-1.1 2,-0.2 -2,-0.2 0.884 119.0 45.6 -79.1 -41.5 -5.9 -1.5 -2.7 78 78 A K H X S+ 0 0 125 -4,-2.5 4,-1.2 -5,-0.3 5,-0.2 0.876 110.4 54.4 -69.0 -38.5 -8.5 -0.8 -0.0 79 79 A R H X S+ 0 0 160 -4,-2.3 4,-2.6 1,-0.2 -1,-0.2 0.853 108.3 49.4 -63.8 -35.4 -6.6 2.1 1.3 80 80 A R H < S+ 0 0 177 -4,-0.9 -1,-0.2 1,-0.2 -2,-0.2 0.765 108.5 53.5 -74.7 -26.1 -6.5 3.7 -2.1 81 81 A A H < S+ 0 0 90 -4,-1.1 -1,-0.2 -3,-0.1 -2,-0.2 0.715 124.1 26.0 -80.0 -22.2 -10.2 3.2 -2.5 82 82 A N H < S- 0 0 106 -4,-1.2 -2,-0.2 -5,-0.1 -3,-0.2 0.830 71.6-179.4-103.9 -58.0 -10.9 5.0 0.8 83 83 A I < + 0 0 108 -4,-2.6 2,-2.1 -5,-0.2 -3,-0.1 0.928 6.8 179.8 52.7 50.6 -8.0 7.4 1.3 84 84 A A + 0 0 90 -5,-0.1 2,-0.4 2,-0.0 -1,-0.2 -0.250 44.0 107.1 -77.8 51.8 -9.4 8.6 4.6 85 85 A A + 0 0 70 -2,-2.1 4,-0.1 -3,-0.1 -1,-0.0 -0.950 24.0 149.1-137.0 115.6 -6.5 11.0 5.0 86 86 A I + 0 0 160 -2,-0.4 3,-0.1 2,-0.1 -1,-0.1 0.727 47.0 98.1-110.4 -38.6 -6.6 14.8 4.6 87 87 A L S S- 0 0 160 1,-0.1 2,-0.1 0, 0.0 -2,-0.0 0.117 89.6 -77.8 -45.1 167.4 -4.0 16.0 7.1 88 88 A E + 0 0 176 2,-0.0 2,-0.3 0, 0.0 -1,-0.1 -0.459 55.5 171.9 -74.3 144.1 -0.6 16.9 5.7 89 89 A S - 0 0 110 -2,-0.1 2,-0.8 -3,-0.1 -4,-0.0 -0.957 27.2-145.2-156.8 134.4 1.8 14.0 5.0 90 90 A S + 0 0 126 -2,-0.3 -2,-0.0 2,-0.0 3,-0.0 -0.852 35.7 155.5-105.4 101.6 5.3 13.8 3.3 91 91 A G - 0 0 51 -2,-0.8 -2,-0.1 2,-0.1 -86,-0.0 -0.983 44.1-144.9-131.3 139.4 5.6 10.6 1.4 92 92 A P + 0 0 132 0, 0.0 -88,-0.1 0, 0.0 -1,-0.1 0.702 60.2 129.7 -69.8 -20.1 7.8 9.6 -1.6 93 93 A S - 0 0 72 1,-0.1 2,-0.3 -88,-0.1 -2,-0.1 0.053 48.7-145.8 -36.1 141.8 5.0 7.4 -2.9 94 94 A S 0 0 105 0, 0.0 -89,-0.2 0, 0.0 -1,-0.1 -0.888 360.0 360.0-119.4 149.6 4.2 8.1 -6.6 95 95 A G 0 0 101 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 0.104 360.0 360.0 64.5 360.0 1.0 8.0 -8.5