==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 15-APR-08 3CU4 . COMPND 2 MOLECULE: CYTOCHROME C FAMILY PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACTER SULFURREDUCENS; . AUTHOR P.R.POKKULURI,M.SCHIFFER . 79 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4888.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 63.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 13.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 30 38.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 26 A G > 0 0 62 0, 0.0 4,-2.0 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 147.7 16.7 12.0 -3.4 2 27 A G H > + 0 0 13 1,-0.2 4,-2.6 2,-0.2 5,-0.2 0.866 360.0 55.3 -61.6 -40.9 14.9 8.7 -2.7 3 28 A G H > S+ 0 0 18 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.884 109.3 46.0 -60.3 -44.1 18.1 6.8 -2.8 4 29 A E H > S+ 0 0 127 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.864 111.4 51.5 -69.7 -38.9 19.7 9.0 -0.1 5 30 A L H X S+ 0 0 26 -4,-2.0 4,-2.8 2,-0.2 5,-0.4 0.920 111.7 48.0 -64.8 -41.6 16.6 8.8 2.1 6 31 A F H X>S+ 0 0 8 -4,-2.6 4,-2.7 1,-0.2 5,-2.4 0.919 110.7 50.5 -63.9 -44.6 16.7 5.0 1.8 7 32 A A H <5S+ 0 0 64 -4,-2.3 -1,-0.2 3,-0.2 -2,-0.2 0.879 115.6 44.3 -61.0 -37.1 20.4 4.9 2.6 8 33 A T H <5S+ 0 0 107 -4,-2.1 -2,-0.2 -5,-0.1 -1,-0.2 0.922 130.3 17.8 -73.6 -46.6 19.7 7.1 5.7 9 34 A H H <5S+ 0 0 62 -4,-2.8 -3,-0.2 -5,-0.1 -2,-0.2 0.663 133.8 23.6-103.8 -19.8 16.6 5.4 7.1 10 35 A C T >X5S+ 0 0 18 -4,-2.7 4,-2.2 -5,-0.4 3,-1.1 0.728 94.0 79.6-121.6 -30.9 16.3 1.9 5.6 11 36 A A T 34< S+ 0 0 24 -4,-2.2 3,-2.4 5,-0.2 -1,-0.2 -0.399 74.7 179.9-123.5 54.9 17.4 -3.6 4.3 15 40 A P G > S- 0 0 59 0, 0.0 3,-2.1 0, 0.0 4,-0.1 -0.366 79.4 -7.0 -59.8 128.4 20.8 -3.7 2.8 16 41 A Q G 3 S- 0 0 192 1,-0.3 3,-0.1 -2,-0.1 -5,-0.0 0.744 134.0 -58.4 56.5 23.5 20.5 -4.1 -1.0 17 42 A G G < S+ 0 0 6 -3,-2.4 10,-2.9 1,-0.1 11,-0.5 0.633 112.8 115.5 83.7 13.0 16.8 -4.6 -0.4 18 43 A G < - 0 0 20 -3,-2.1 2,-0.3 8,-0.2 9,-0.2 0.140 64.4-115.0 -90.3-148.7 17.2 -7.6 1.9 19 44 A N - 0 0 32 -5,-0.1 -5,-0.2 7,-0.1 7,-0.1 -0.825 16.7-169.8-158.5 114.8 16.3 -7.8 5.6 20 45 A T S S+ 0 0 91 -7,-2.6 -6,-0.1 -2,-0.3 -7,-0.1 0.643 91.0 38.2 -79.3 -17.3 18.7 -8.3 8.5 21 46 A V S S+ 0 0 93 -8,-0.4 -1,-0.1 1,-0.3 -2,-0.1 0.888 125.7 26.3 -97.6 -61.1 15.9 -8.9 11.1 22 47 A H S > S- 0 0 88 3,-0.2 3,-0.8 1,-0.2 -1,-0.3 -0.867 71.5-161.6-109.3 96.8 13.2 -11.0 9.3 23 48 A P T 3 S+ 0 0 94 0, 0.0 3,-0.2 0, 0.0 -1,-0.2 0.812 85.6 50.5 -45.0 -44.2 15.0 -12.9 6.5 24 49 A E T 3 S+ 0 0 121 1,-0.2 2,-1.7 -6,-0.0 -2,-0.0 0.841 95.2 72.5 -69.7 -34.3 11.9 -13.8 4.6 25 50 A K < + 0 0 89 -3,-0.8 -1,-0.2 2,-0.1 -3,-0.2 -0.448 67.0 151.7 -86.3 69.3 10.4 -10.2 4.4 26 51 A T - 0 0 27 -2,-1.7 -8,-0.2 -3,-0.2 -7,-0.1 -0.270 57.6-111.6 -86.9 177.5 12.8 -8.6 1.9 27 52 A L + 0 0 30 -10,-2.9 51,-0.2 -9,-0.2 -9,-0.1 0.378 69.5 133.5 -92.7 3.2 12.0 -5.7 -0.4 28 53 A A >> - 0 0 28 -11,-0.5 4,-2.7 1,-0.1 3,-0.6 -0.279 67.5-117.4 -54.8 137.5 12.2 -7.9 -3.5 29 54 A R H 3> S+ 0 0 135 49,-1.4 4,-2.7 1,-0.2 5,-0.3 0.867 111.2 48.7 -45.6 -52.7 9.2 -7.2 -5.7 30 55 A A H 3> S+ 0 0 75 1,-0.2 4,-1.3 2,-0.2 -1,-0.2 0.868 115.7 45.1 -59.7 -37.6 7.7 -10.7 -5.6 31 56 A R H <> S+ 0 0 111 -3,-0.6 4,-1.0 2,-0.2 -2,-0.2 0.947 115.2 44.4 -71.9 -51.4 8.0 -10.8 -1.8 32 57 A R H ><>S+ 0 0 13 -4,-2.7 5,-2.7 1,-0.2 3,-0.6 0.905 114.0 50.3 -62.6 -40.5 6.7 -7.3 -1.1 33 58 A E H ><5S+ 0 0 61 -4,-2.7 3,-1.9 -5,-0.3 -1,-0.2 0.844 101.7 60.9 -68.0 -31.8 3.8 -7.7 -3.5 34 59 A A H 3<5S+ 0 0 85 -4,-1.3 -1,-0.2 1,-0.3 -2,-0.2 0.815 108.4 47.1 -62.6 -27.3 2.7 -11.0 -2.0 35 60 A N T <<5S- 0 0 95 -4,-1.0 -1,-0.3 -3,-0.6 -2,-0.2 0.183 127.6 -99.5 -98.9 14.8 2.2 -9.0 1.1 36 61 A G T < 5S+ 0 0 49 -3,-1.9 2,-1.0 1,-0.1 3,-0.3 0.556 85.6 124.4 82.5 8.6 0.3 -6.2 -0.6 37 62 A I < + 0 0 29 -5,-2.7 -1,-0.1 1,-0.2 -2,-0.1 -0.750 28.2 125.6-104.2 86.3 3.2 -3.7 -0.9 38 63 A R + 0 0 148 -2,-1.0 -1,-0.2 -5,-0.1 2,-0.1 0.817 51.4 56.3-109.1 -47.3 3.1 -3.0 -4.6 39 64 A T S > S- 0 0 37 -3,-0.3 4,-2.1 1,-0.1 5,-0.2 -0.404 83.7-109.6 -91.2 167.6 2.7 0.7 -5.4 40 65 A V H > S+ 0 0 40 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.925 123.5 49.3 -58.5 -44.6 4.8 3.7 -4.4 41 66 A R H > S+ 0 0 183 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.823 105.4 57.8 -66.3 -29.9 2.0 4.8 -2.2 42 67 A D H > S+ 0 0 55 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.923 109.2 44.9 -64.3 -43.3 1.8 1.3 -0.7 43 68 A V H X S+ 0 0 11 -4,-2.1 4,-1.8 2,-0.2 -2,-0.2 0.942 113.0 50.5 -64.9 -46.6 5.4 1.6 0.4 44 69 A A H < S+ 0 0 10 -4,-2.4 4,-0.5 1,-0.2 -2,-0.2 0.887 114.3 44.2 -58.7 -41.4 4.9 5.1 1.7 45 70 A A H >X S+ 0 0 62 -4,-2.5 3,-1.2 1,-0.2 4,-0.8 0.887 107.1 60.8 -71.5 -39.2 1.8 4.0 3.7 46 71 A Y H >< S+ 0 0 76 -4,-2.5 3,-1.0 1,-0.2 -2,-0.2 0.887 95.7 59.2 -56.8 -42.5 3.5 0.9 5.0 47 72 A I T 3< S+ 0 0 11 -4,-1.8 10,-3.2 1,-0.3 -1,-0.2 0.740 99.6 58.4 -63.8 -19.7 6.3 2.7 6.8 48 73 A R T <4 S+ 0 0 27 -3,-1.2 -1,-0.3 -4,-0.5 -2,-0.2 0.794 124.6 19.2 -76.7 -28.5 3.8 4.6 9.0 49 74 A N S << S+ 0 0 137 -3,-1.0 -1,-0.3 -4,-0.8 -2,-0.1 -0.548 90.2 168.2-141.4 70.6 2.4 1.3 10.3 50 75 A P - 0 0 29 0, 0.0 3,-0.1 0, 0.0 6,-0.1 -0.112 36.8 -86.0 -80.1 178.1 5.0 -1.4 9.7 51 76 A G > - 0 0 25 1,-0.2 3,-1.8 4,-0.1 0, 0.0 -0.247 65.2 -60.5 -78.6 171.2 5.3 -5.0 11.0 52 77 A P T 3 S+ 0 0 138 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.191 122.4 24.9 -54.2 136.0 6.9 -6.0 14.3 53 78 A G T 3 S+ 0 0 70 1,-0.2 -2,-0.1 -3,-0.1 -31,-0.0 0.259 98.2 100.8 94.4 -14.4 10.5 -5.2 14.6 54 79 A M S < S- 0 0 47 -3,-1.8 -1,-0.2 -33,-0.0 2,-0.1 -0.920 74.8-124.0-106.5 125.8 10.4 -2.3 12.2 55 80 A P - 0 0 84 0, 0.0 2,-0.2 0, 0.0 -4,-0.1 -0.432 29.5-112.1 -69.1 141.3 10.3 1.2 13.7 56 81 A A - 0 0 65 -2,-0.1 2,-0.8 -6,-0.1 -8,-0.2 -0.518 19.7-147.6 -75.1 138.4 7.3 3.3 12.5 57 82 A F - 0 0 21 -10,-3.2 -1,-0.1 -2,-0.2 -8,-0.1 -0.883 20.5-158.1-108.6 97.8 8.1 6.4 10.4 58 83 A G > - 0 0 30 -2,-0.8 4,-2.8 1,-0.1 3,-0.4 -0.235 29.9-106.4 -73.3 165.5 5.5 9.0 11.2 59 84 A E T 4 S+ 0 0 114 1,-0.2 -1,-0.1 2,-0.2 8,-0.1 0.770 119.8 56.7 -62.4 -27.9 4.5 11.9 8.9 60 85 A A T 4 S+ 0 0 106 1,-0.1 -1,-0.2 3,-0.1 -3,-0.0 0.861 113.4 39.8 -72.0 -35.1 6.4 14.4 11.2 61 86 A M T 4 S+ 0 0 105 -3,-0.4 -2,-0.2 1,-0.3 -1,-0.1 0.906 133.2 20.6 -78.8 -46.6 9.6 12.4 10.7 62 87 A I S < S- 0 0 2 -4,-2.8 -1,-0.3 4,-0.0 5,-0.1 -0.895 87.0-142.7-127.2 98.1 9.2 11.6 7.0 63 88 A P >> - 0 0 56 0, 0.0 4,-2.3 0, 0.0 3,-0.8 -0.159 30.0-100.4 -58.3 155.7 6.8 14.0 5.3 64 89 A P H 3> S+ 0 0 81 0, 0.0 4,-2.2 0, 0.0 5,-0.2 0.852 122.0 53.5 -43.7 -48.1 4.5 12.6 2.6 65 90 A A H 3> S+ 0 0 63 1,-0.2 4,-1.5 2,-0.2 5,-0.1 0.883 112.1 44.6 -59.0 -40.4 6.7 13.9 -0.3 66 91 A D H <> S+ 0 0 55 -3,-0.8 4,-2.2 2,-0.2 -1,-0.2 0.853 108.9 56.0 -73.4 -34.9 9.7 12.1 1.2 67 92 A A H X S+ 0 0 0 -4,-2.3 4,-2.2 1,-0.2 -2,-0.2 0.895 108.4 49.5 -62.9 -38.1 7.8 8.9 1.9 68 93 A L H X S+ 0 0 69 -4,-2.2 4,-2.7 -5,-0.2 -1,-0.2 0.884 106.9 54.2 -67.9 -38.6 6.9 8.8 -1.8 69 94 A K H X S+ 0 0 85 -4,-1.5 4,-1.9 2,-0.2 -2,-0.2 0.909 109.1 49.1 -61.5 -40.7 10.5 9.4 -2.8 70 95 A I H X S+ 0 0 3 -4,-2.2 4,-2.7 1,-0.2 -2,-0.2 0.931 111.2 49.7 -63.5 -44.4 11.5 6.4 -0.8 71 96 A G H X S+ 0 0 0 -4,-2.2 4,-2.4 1,-0.2 5,-0.3 0.896 108.3 52.9 -61.2 -40.2 8.7 4.4 -2.4 72 97 A E H X S+ 0 0 114 -4,-2.7 4,-1.2 1,-0.2 -1,-0.2 0.887 112.4 45.1 -62.8 -38.9 9.8 5.4 -5.8 73 98 A Y H X S+ 0 0 82 -4,-1.9 4,-2.0 -5,-0.2 -2,-0.2 0.912 112.0 52.4 -70.6 -44.0 13.4 4.2 -5.1 74 99 A V H X S+ 0 0 7 -4,-2.7 4,-1.6 1,-0.2 -2,-0.2 0.933 109.0 46.7 -60.1 -49.6 12.2 1.0 -3.5 75 100 A V H < S+ 0 0 44 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.883 118.2 42.5 -64.6 -34.4 10.0 -0.2 -6.4 76 101 A A H < S+ 0 0 84 -4,-1.2 -1,-0.2 -5,-0.3 -2,-0.2 0.761 115.8 47.4 -82.5 -25.2 12.6 0.6 -9.0 77 102 A S H < S+ 0 0 46 -4,-2.0 -2,-0.2 1,-0.2 -1,-0.2 0.719 104.8 55.9 -90.6 -22.7 15.7 -0.8 -7.1 78 103 A F < 0 0 19 -4,-1.6 -49,-1.4 -5,-0.2 -1,-0.2 -0.739 360.0 360.0-121.9 88.6 14.6 -4.2 -5.9 79 104 A P 0 0 138 0, 0.0 -3,-0.0 0, 0.0 -52,-0.0 -0.176 360.0 360.0 -71.8 360.0 13.3 -6.6 -8.5