==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 27-AUG-99 1CWX . COMPND 2 MOLECULE: HEPATITIS C VIRUS CAPSID PROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR L.LADAVIERE,G.DELEAGE,R.MONTSERRET,P.DALBON,M.JOLIVET, . 44 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5005.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 8 18.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 2 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 177 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 175.2 -30.2 4.8 3.4 2 2 A T + 0 0 122 1,-0.0 0, 0.0 2,-0.0 0, 0.0 -0.340 360.0 153.0-179.9 89.4 -26.7 3.6 4.2 3 3 A N + 0 0 165 1,-0.1 4,-0.1 -2,-0.1 -1,-0.0 -0.688 11.9 147.5-130.0 82.4 -24.0 5.7 6.0 4 4 A P - 0 0 90 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.962 63.6-103.7 -78.1 -60.5 -21.5 3.5 7.8 5 5 A K S S+ 0 0 189 1,-0.6 2,-0.1 0, 0.0 -2,-0.0 -0.087 90.0 83.0 164.3 -51.5 -18.3 5.6 7.5 6 6 A P - 0 0 79 0, 0.0 -1,-0.6 0, 0.0 0, 0.0 -0.452 59.0-151.9 -77.6 149.5 -16.0 4.1 4.8 7 7 A Q S S+ 0 0 172 -2,-0.1 2,-0.3 -3,-0.1 0, 0.0 0.703 76.2 76.4 -94.7 -21.6 -16.6 5.0 1.2 8 8 A R + 0 0 181 1,-0.2 5,-0.0 2,-0.1 0, 0.0 -0.635 48.6 107.9 -89.2 147.6 -15.2 1.7 -0.2 9 9 A K S S+ 0 0 158 -2,-0.3 -1,-0.2 0, 0.0 -2,-0.1 0.056 77.9 37.4 179.4 -49.9 -17.3 -1.5 -0.0 10 10 A T S S+ 0 0 121 2,-0.1 -2,-0.1 1,-0.0 0, 0.0 0.915 121.7 32.5 -85.7 -80.4 -18.6 -2.6 -3.5 11 11 A K S S+ 0 0 173 1,-0.0 -3,-0.1 3,-0.0 -1,-0.0 0.934 87.2 161.8 -41.6 -61.3 -15.9 -1.9 -6.1 12 12 A R - 0 0 183 2,-0.0 -2,-0.1 0, 0.0 -1,-0.0 -0.061 53.6 -12.2 63.2-174.8 -13.1 -2.5 -3.6 13 13 A N + 0 0 117 1,-0.1 3,-0.1 -5,-0.0 0, 0.0 0.081 67.5 150.3 -45.0 169.3 -9.6 -3.2 -4.9 14 14 A T + 0 0 119 1,-0.5 2,-0.3 0, 0.0 -1,-0.1 0.215 54.0 50.4-173.7 -38.3 -9.4 -3.9 -8.7 15 15 A N S S- 0 0 114 1,-0.1 -1,-0.5 0, 0.0 4,-0.2 -0.889 74.7-122.9-119.1 151.0 -6.0 -2.8 -10.1 16 16 A R S S+ 0 0 172 -2,-0.3 4,-0.1 1,-0.2 -1,-0.1 -0.152 72.9 88.1 -79.8-178.7 -2.5 -3.6 -8.9 17 17 A R S > S+ 0 0 192 0, 0.0 4,-1.0 0, 0.0 3,-0.4 -0.332 89.1 57.7 120.8 -45.6 0.2 -1.0 -7.9 18 18 A P T 4 S+ 0 0 64 0, 0.0 2,-0.7 0, 0.0 4,-0.5 0.721 94.4 69.6 -82.6 -24.9 -0.8 -0.6 -4.2 19 19 A Q T 4 S+ 0 0 51 1,-0.2 -3,-0.1 -4,-0.2 0, 0.0 -0.162 106.4 37.6 -86.7 41.3 -0.2 -4.3 -3.8 20 20 A D T >4 S+ 0 0 90 -2,-0.7 3,-1.8 -3,-0.4 -1,-0.2 0.297 102.9 62.2-155.4 -43.2 3.4 -3.8 -4.2 21 21 A V T 3< S+ 0 0 50 -4,-1.0 12,-0.2 1,-0.3 -2,-0.1 0.536 98.4 63.1 -77.0 2.2 4.4 -0.6 -2.6 22 22 A K T 3 S- 0 0 83 -4,-0.5 -1,-0.3 10,-0.1 8,-0.2 0.273 112.8-121.5-102.1 7.8 3.2 -2.2 0.6 23 23 A F < - 0 0 50 -3,-1.8 6,-0.3 6,-0.2 3,-0.1 0.961 41.1-159.4 43.4 68.4 6.0 -4.8 0.2 24 24 A P + 0 0 53 0, 0.0 -1,-0.1 0, 0.0 4,-0.1 -0.364 61.4 25.9 -75.7 150.9 3.4 -7.5 0.3 25 25 A G S S+ 0 0 90 2,-0.1 3,-0.1 -2,-0.1 -2,-0.1 0.993 141.1 12.2 56.6 68.4 4.3 -11.1 1.1 26 26 A G S S+ 0 0 82 -3,-0.1 2,-0.1 1,-0.1 3,-0.0 0.867 109.9 84.4 97.9 67.5 7.4 -10.3 3.2 27 27 A G - 0 0 32 4,-0.0 -2,-0.1 -5,-0.0 -1,-0.1 -0.282 68.1-139.5 165.4 100.4 7.3 -6.5 3.9 28 28 A Q - 0 0 177 1,-0.2 -5,-0.1 -4,-0.1 -3,-0.0 0.664 45.6-123.2 -48.1 -10.3 5.4 -4.9 6.7 29 29 A I S S+ 0 0 71 -6,-0.3 4,-0.2 -9,-0.1 -1,-0.2 0.382 99.8 86.5 80.4 -6.7 4.6 -2.3 3.9 30 30 A V S S+ 0 0 86 -8,-0.2 -1,-0.1 -7,-0.1 -8,-0.1 0.228 90.4 41.9-107.2 14.5 6.1 0.3 6.2 31 31 A G S S+ 0 0 31 -9,-0.1 4,-0.4 3,-0.1 5,-0.1 0.593 103.5 56.7-131.4 -25.3 9.7 -0.2 5.0 32 32 A G S S+ 0 0 2 2,-0.3 -10,-0.1 1,-0.2 -2,-0.1 0.847 104.9 54.6 -81.7 -25.0 9.7 -0.7 1.3 33 33 A V S S+ 0 0 53 1,-0.2 -1,-0.2 -4,-0.2 -3,-0.1 0.651 113.3 45.7 -74.2 -10.7 8.0 2.7 0.8 34 34 A Y S > S+ 0 0 112 2,-0.2 4,-0.9 1,-0.1 -2,-0.3 0.507 101.6 64.1-104.7 -13.0 11.0 3.7 2.9 35 35 A L T 4 S+ 0 0 102 -4,-0.4 -2,-0.2 1,-0.2 -3,-0.1 0.326 93.4 69.4 -90.5 6.1 13.3 1.6 0.7 36 36 A L T 4 S+ 0 0 95 -5,-0.1 3,-0.4 2,-0.1 -1,-0.2 0.875 102.8 34.2 -90.5 -44.9 12.3 4.0 -2.1 37 37 A P T 4 S+ 0 0 100 0, 0.0 -2,-0.1 0, 0.0 -3,-0.1 0.949 125.7 37.4 -78.6 -56.0 14.1 7.2 -0.9 38 38 A R S < S+ 0 0 162 -4,-0.9 2,-1.0 3,-0.0 4,-0.2 0.080 77.7 160.2 -86.1 29.0 17.2 5.9 0.7 39 39 A R S S- 0 0 197 -3,-0.4 -4,-0.1 1,-0.2 -3,-0.1 -0.267 80.8 -8.7 -52.8 94.1 17.5 3.1 -2.0 40 40 A G S S- 0 0 26 -2,-1.0 -1,-0.2 1,-0.1 -5,-0.0 0.978 72.7-176.2 75.7 74.4 21.2 2.4 -1.4 41 41 A P + 0 0 99 0, 0.0 2,-0.6 0, 0.0 -2,-0.1 0.489 69.2 71.7 -79.8 -5.4 22.3 5.1 1.0 42 42 A R + 0 0 219 -4,-0.2 -4,-0.0 1,-0.1 0, 0.0 -0.873 45.8 136.8-116.3 102.8 25.9 3.8 0.8 43 43 A L 0 0 157 -2,-0.6 -1,-0.1 0, 0.0 -3,-0.0 0.141 360.0 360.0-128.8 18.9 27.6 4.5 -2.6 44 44 A G 0 0 147 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 -0.136 360.0 360.0 150.6 360.0 31.1 5.6 -1.4