==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 01-JUL-05 2CXY . COMPND 2 MOLECULE: BAF250B SUBUNIT; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.SHIMADA,H.NIWA,S.YOKOYAMA,RIKEN STRUCTURAL . 114 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7292.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 78 68.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 4.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 53 46.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 6 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 2 0 1 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 109 0, 0.0 2,-0.3 0, 0.0 38,-0.0 0.000 360.0 360.0 360.0 40.5 64.3 28.6 10.6 2 2 A E - 0 0 85 35,-0.4 35,-2.8 1,-0.1 2,-0.1 -0.731 360.0-108.5 -94.9 143.9 63.0 27.8 7.1 3 3 A K B > -A 36 0A 140 -2,-0.3 3,-2.1 33,-0.2 33,-0.3 -0.420 25.3-121.5 -67.9 144.9 65.2 28.1 4.1 4 4 A I T > S+ 0 0 20 31,-2.4 3,-2.3 1,-0.3 4,-0.3 0.786 107.7 74.1 -59.8 -26.3 64.3 31.0 1.8 5 5 A T T >> S+ 0 0 69 30,-0.3 3,-1.7 1,-0.3 4,-0.6 0.757 79.3 75.7 -59.7 -22.1 63.8 28.6 -1.1 6 6 A K H X> S+ 0 0 57 -3,-2.1 4,-1.1 1,-0.3 3,-0.7 0.761 79.2 71.5 -60.8 -22.7 60.5 27.6 0.7 7 7 A V H <4 S+ 0 0 3 -3,-2.3 -1,-0.3 1,-0.3 4,-0.2 0.795 93.0 54.8 -66.8 -24.2 59.1 30.9 -0.6 8 8 A Y H <4 S+ 0 0 72 -3,-1.7 3,-0.3 -4,-0.3 -1,-0.3 0.781 112.6 45.4 -74.2 -24.9 59.0 29.4 -4.1 9 9 A E H << S+ 0 0 126 -3,-0.7 -2,-0.2 -4,-0.6 -1,-0.2 0.558 86.1 85.0 -95.1 -12.5 57.0 26.5 -2.7 10 10 A L S < S- 0 0 87 -4,-1.1 2,-0.3 -3,-0.1 -1,-0.2 0.659 110.1 -9.5 -66.4 -15.1 54.4 28.3 -0.5 11 11 A G - 0 0 22 -3,-0.3 -1,-0.1 -4,-0.2 38,-0.0 -0.963 54.3-135.4-168.5 168.4 52.2 28.8 -3.6 12 12 A N + 0 0 154 -2,-0.3 -3,-0.1 4,-0.1 -4,-0.0 -0.008 41.1 155.2-127.8 31.6 52.2 28.4 -7.3 13 13 A E >> - 0 0 52 1,-0.1 3,-1.7 2,-0.1 4,-0.6 -0.323 55.0-117.0 -54.1 138.2 50.6 31.6 -8.4 14 14 A P T 34 S+ 0 0 119 0, 0.0 4,-0.4 0, 0.0 3,-0.2 0.842 113.1 46.4 -49.1 -38.4 51.8 32.3 -12.0 15 15 A E T 3> S+ 0 0 110 1,-0.2 4,-2.1 2,-0.1 5,-0.2 0.572 90.7 84.6 -84.0 -9.3 53.5 35.5 -10.9 16 16 A R H <> S+ 0 0 4 -3,-1.7 4,-2.9 1,-0.2 5,-0.3 0.936 85.7 52.1 -61.7 -49.1 55.2 34.1 -7.8 17 17 A K H X S+ 0 0 117 -4,-0.6 4,-2.7 -3,-0.2 -1,-0.2 0.927 113.0 43.3 -56.1 -48.6 58.3 32.7 -9.5 18 18 A L H > S+ 0 0 109 -4,-0.4 4,-2.8 1,-0.2 5,-0.3 0.929 114.2 51.6 -63.5 -43.4 59.3 35.9 -11.3 19 19 A W H X S+ 0 0 27 -4,-2.1 4,-2.9 1,-0.2 -2,-0.2 0.933 112.5 45.4 -59.6 -45.6 58.5 38.1 -8.3 20 20 A V H X S+ 0 0 0 -4,-2.9 4,-3.0 2,-0.2 5,-0.3 0.934 111.8 51.4 -65.6 -43.9 60.8 35.9 -6.1 21 21 A D H X S+ 0 0 54 -4,-2.7 4,-1.7 -5,-0.3 5,-0.2 0.931 114.7 43.7 -56.7 -46.7 63.6 35.8 -8.6 22 22 A R H X S+ 0 0 127 -4,-2.8 4,-2.4 -5,-0.2 -2,-0.2 0.924 115.8 48.7 -65.0 -43.3 63.5 39.6 -8.9 23 23 A Y H X S+ 0 0 2 -4,-2.9 4,-2.4 -5,-0.3 -2,-0.2 0.931 111.9 44.9 -63.6 -50.0 63.2 40.0 -5.1 24 24 A L H X S+ 0 0 29 -4,-3.0 4,-2.4 2,-0.2 10,-0.2 0.874 115.2 48.7 -65.8 -34.8 66.0 37.7 -4.0 25 25 A T H X S+ 0 0 71 -4,-1.7 4,-2.4 -5,-0.3 -1,-0.2 0.917 109.6 52.7 -69.8 -42.1 68.4 39.1 -6.7 26 26 A F H X S+ 0 0 32 -4,-2.4 4,-1.2 -5,-0.2 -2,-0.2 0.933 113.0 45.4 -57.1 -45.6 67.5 42.7 -5.6 27 27 A X H <>S+ 0 0 5 -4,-2.4 5,-2.1 1,-0.2 4,-0.5 0.883 111.6 49.9 -67.4 -40.3 68.3 41.8 -2.0 28 28 A E H ><5S+ 0 0 143 -4,-2.4 3,-0.8 1,-0.2 -1,-0.2 0.907 111.4 50.1 -66.6 -38.6 71.6 39.9 -2.8 29 29 A E H 3<5S+ 0 0 158 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.746 106.7 52.5 -74.1 -23.1 72.9 42.8 -4.9 30 30 A R T 3<5S- 0 0 132 -4,-1.2 -1,-0.2 -5,-0.2 -2,-0.2 0.519 120.3-105.5 -89.5 -3.6 72.2 45.5 -2.4 31 31 A G T < 5S+ 0 0 61 -3,-0.8 -3,-0.2 -4,-0.5 -2,-0.1 0.584 97.5 99.5 93.7 10.3 74.1 43.6 0.2 32 32 A S < - 0 0 38 -5,-2.1 -4,-0.2 -6,-0.2 -3,-0.1 -0.451 54.2-178.2-124.0 57.8 71.2 42.4 2.3 33 33 A P - 0 0 77 0, 0.0 2,-0.6 0, 0.0 -5,-0.1 -0.248 20.3-137.8 -60.1 144.2 70.8 38.8 1.0 34 34 A V + 0 0 17 -10,-0.2 -6,-0.1 1,-0.1 3,-0.1 -0.921 31.7 162.4-106.5 120.9 67.9 36.8 2.5 35 35 A S + 0 0 91 -2,-0.6 -31,-2.4 1,-0.2 2,-0.3 0.648 64.3 39.8-109.0 -24.6 68.8 33.2 3.3 36 36 A S B S-A 3 0A 66 -33,-0.3 -33,-0.2 -32,-0.2 -1,-0.2 -0.911 91.1 -99.6-125.8 153.5 66.0 32.2 5.6 37 37 A L - 0 0 10 -35,-2.8 -35,-0.4 -2,-0.3 9,-0.1 -0.574 44.4-120.9 -71.9 130.3 62.3 33.0 5.6 38 38 A P - 0 0 5 0, 0.0 7,-3.4 0, 0.0 2,-0.3 -0.256 33.7-157.6 -66.2 160.2 61.6 35.8 8.0 39 39 A A E -B 44 0B 40 5,-0.3 2,-0.5 7,-0.0 3,-0.1 -0.952 25.4-149.1-142.2 160.3 59.1 35.1 10.8 40 40 A V E > S-B 43 0B 14 3,-1.9 3,-2.1 -2,-0.3 2,-0.2 -0.989 83.4 -40.7-125.0 113.7 56.8 36.7 13.2 41 41 A G T 3 S- 0 0 76 -2,-0.5 37,-0.0 1,-0.3 -2,-0.0 -0.462 126.2 -25.2 66.1-127.1 56.7 34.6 16.3 42 42 A K T 3 S+ 0 0 213 -2,-0.2 -1,-0.3 36,-0.1 36,-0.0 0.154 115.6 105.0-104.8 18.4 56.7 31.0 15.2 43 43 A K E < -B 40 0B 68 -3,-2.1 -3,-1.9 35,-0.1 2,-0.2 -0.876 65.7-140.2-106.4 115.2 55.1 31.8 11.8 44 44 A P E -B 39 0B 53 0, 0.0 2,-0.6 0, 0.0 -5,-0.3 -0.498 28.4-124.0 -68.1 135.0 57.3 31.8 8.7 45 45 A L - 0 0 5 -7,-3.4 2,-1.6 -2,-0.2 3,-0.1 -0.740 4.4-141.7 -90.9 121.9 56.3 34.8 6.5 46 46 A D > - 0 0 33 -2,-0.6 4,-2.5 1,-0.2 5,-0.2 -0.630 21.5-169.0 -76.4 93.2 55.2 34.2 2.9 47 47 A L H > S+ 0 0 0 -2,-1.6 4,-2.3 1,-0.2 -1,-0.2 0.818 80.2 54.8 -57.7 -33.2 56.9 37.3 1.6 48 48 A F H > S+ 0 0 9 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.954 110.6 44.5 -66.4 -48.6 55.2 37.1 -1.8 49 49 A R H > S+ 0 0 102 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.915 113.3 51.4 -61.8 -41.8 51.7 37.0 -0.3 50 50 A L H X S+ 0 0 3 -4,-2.5 4,-2.5 1,-0.2 5,-0.2 0.934 110.9 48.0 -61.3 -44.5 52.5 39.8 2.2 51 51 A Y H X S+ 0 0 6 -4,-2.3 4,-2.3 -5,-0.2 -1,-0.2 0.921 112.9 48.3 -61.6 -44.3 53.8 42.0 -0.7 52 52 A V H X S+ 0 0 41 -4,-2.5 4,-1.9 2,-0.2 -2,-0.2 0.908 112.4 48.1 -63.4 -43.4 50.7 41.3 -2.8 53 53 A C H X S+ 0 0 14 -4,-2.8 4,-1.3 2,-0.2 -2,-0.2 0.899 113.2 47.1 -66.7 -39.6 48.3 42.0 0.1 54 54 A V H X>S+ 0 0 0 -4,-2.5 5,-2.7 -5,-0.2 4,-1.6 0.889 109.9 54.1 -68.9 -35.8 50.1 45.2 1.0 55 55 A K H <5S+ 0 0 118 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.881 102.3 58.2 -64.4 -37.0 50.1 46.2 -2.7 56 56 A E H <5S+ 0 0 143 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.889 108.4 45.5 -59.0 -39.5 46.3 45.7 -2.8 57 57 A I H <5S- 0 0 29 -4,-1.3 -1,-0.2 -3,-0.1 -2,-0.2 0.786 129.8 -97.5 -74.5 -28.6 46.0 48.3 -0.1 58 58 A G T <5 - 0 0 43 -4,-1.6 4,-0.3 -5,-0.1 -3,-0.2 0.581 64.6 -69.2 122.3 14.6 48.4 50.6 -1.8 59 59 A G S > S+ 0 0 16 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.876 132.0 50.6 -45.9 -52.8 53.4 50.9 3.1 61 61 A A H > S+ 0 0 70 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.886 112.8 47.0 -58.4 -40.5 52.3 54.5 3.3 62 62 A Q H > S+ 0 0 81 -3,-0.5 4,-2.5 -4,-0.3 -1,-0.2 0.871 110.4 51.0 -70.2 -38.8 48.7 53.5 2.6 63 63 A V H X>S+ 0 0 0 -4,-2.5 5,-2.2 2,-0.2 4,-0.5 0.911 113.0 48.2 -65.0 -38.2 48.7 50.7 5.1 64 64 A N H ><5S+ 0 0 54 -4,-2.5 3,-0.8 -5,-0.3 -2,-0.2 0.937 112.6 46.7 -65.1 -48.3 50.0 53.1 7.7 65 65 A K H 3<5S+ 0 0 150 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.911 117.7 42.0 -61.1 -45.0 47.5 55.8 6.9 66 66 A N H 3<5S- 0 0 64 -4,-2.5 -1,-0.2 -5,-0.1 -2,-0.2 0.448 105.2-128.9 -83.9 0.0 44.5 53.4 6.9 67 67 A K T <<5 + 0 0 173 -3,-0.8 3,-0.3 -4,-0.5 4,-0.2 0.932 56.2 148.2 51.3 54.1 45.8 51.6 10.0 68 68 A K >< + 0 0 60 -5,-2.2 4,-2.4 1,-0.2 5,-0.2 0.299 32.6 99.8-102.1 9.5 45.5 48.2 8.3 69 69 A W H > S+ 0 0 20 -6,-0.4 4,-2.6 1,-0.2 5,-0.2 0.871 84.4 50.0 -64.5 -35.4 48.4 46.3 9.9 70 70 A R H > S+ 0 0 133 -3,-0.3 4,-2.3 2,-0.2 -1,-0.2 0.888 110.4 50.4 -70.0 -36.9 46.1 44.5 12.3 71 71 A E H > S+ 0 0 107 -4,-0.2 4,-3.0 2,-0.2 5,-0.2 0.941 112.6 47.4 -64.6 -45.9 43.7 43.5 9.5 72 72 A L H X S+ 0 0 8 -4,-2.4 4,-2.0 1,-0.2 6,-0.2 0.924 111.9 48.4 -61.8 -44.1 46.7 42.2 7.5 73 73 A A H <>S+ 0 0 0 -4,-2.6 5,-2.8 2,-0.2 6,-1.5 0.898 114.6 47.5 -64.0 -37.9 48.1 40.2 10.5 74 74 A T H ><5S+ 0 0 61 -4,-2.3 3,-1.4 1,-0.2 -2,-0.2 0.958 114.0 45.5 -66.5 -49.8 44.6 38.8 11.2 75 75 A N H 3<5S+ 0 0 116 -4,-3.0 -2,-0.2 1,-0.3 -1,-0.2 0.749 113.9 48.8 -67.7 -24.5 44.0 37.8 7.6 76 76 A L T 3<5S- 0 0 35 -4,-2.0 -1,-0.3 -5,-0.2 -2,-0.2 0.322 112.4-118.5 -96.4 7.1 47.5 36.3 7.1 77 77 A N T < 5S+ 0 0 130 -3,-1.4 -3,-0.2 -4,-0.1 -2,-0.1 0.814 78.8 125.4 60.0 33.0 47.1 34.3 10.3 78 78 A V S S- 0 0 45 1,-0.1 4,-1.8 -8,-0.1 5,-0.1 -0.361 81.8-116.5 -87.4 166.1 47.1 41.3 18.7 82 82 A S H > S+ 0 0 75 1,-0.2 4,-2.1 2,-0.2 5,-0.2 0.854 117.5 54.2 -66.3 -34.7 48.5 44.8 18.5 83 83 A S H > S+ 0 0 83 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.876 105.3 51.4 -69.3 -36.1 52.0 43.2 18.9 84 84 A A H > S+ 0 0 8 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.909 110.1 51.0 -66.0 -39.8 51.5 40.8 16.0 85 85 A A H X S+ 0 0 9 -4,-1.8 4,-2.3 1,-0.2 -2,-0.2 0.922 111.7 46.2 -62.5 -46.0 50.5 43.8 13.8 86 86 A S H X S+ 0 0 76 -4,-2.1 4,-2.1 1,-0.2 -1,-0.2 0.871 112.0 51.3 -66.2 -36.6 53.5 45.8 14.9 87 87 A S H X S+ 0 0 56 -4,-2.3 4,-2.2 2,-0.2 -1,-0.2 0.893 110.2 49.3 -67.4 -38.5 55.8 42.8 14.3 88 88 A L H X S+ 0 0 0 -4,-2.4 4,-2.3 2,-0.2 -2,-0.2 0.924 110.0 50.6 -65.9 -43.6 54.4 42.3 10.8 89 89 A K H X S+ 0 0 75 -4,-2.3 4,-2.5 1,-0.2 -1,-0.2 0.919 109.6 52.2 -59.2 -42.3 54.8 46.0 10.0 90 90 A K H X S+ 0 0 109 -4,-2.1 4,-2.7 1,-0.2 -1,-0.2 0.923 109.3 48.3 -60.8 -45.2 58.5 45.7 11.1 91 91 A Q H X S+ 0 0 15 -4,-2.2 4,-2.7 2,-0.2 5,-0.4 0.868 110.1 52.3 -66.3 -34.5 59.1 42.7 8.9 92 92 A Y H X>S+ 0 0 2 -4,-2.3 4,-2.4 2,-0.2 5,-1.7 0.939 112.3 45.6 -66.3 -43.3 57.6 44.5 5.9 93 93 A I H <5S+ 0 0 80 -4,-2.5 5,-0.5 3,-0.2 4,-0.3 0.939 117.3 44.3 -63.7 -45.3 59.8 47.5 6.4 94 94 A Q H <5S+ 0 0 89 -4,-2.7 -2,-0.2 -5,-0.2 -1,-0.2 0.890 129.1 21.7 -67.2 -42.2 62.9 45.4 6.9 95 95 A Y H <5S+ 0 0 48 -4,-2.7 -3,-0.2 -5,-0.2 -2,-0.2 0.728 132.9 22.0-102.0 -23.5 62.4 43.0 4.1 96 96 A L T X5S+ 0 0 0 -4,-2.4 4,-2.5 -5,-0.4 -3,-0.2 0.671 93.5 80.5-123.4 -20.3 60.1 44.5 1.5 97 97 A F H > S+ 0 0 31 -5,-0.5 4,-1.9 1,-0.2 -1,-0.2 0.906 113.5 48.2 -61.1 -37.9 63.1 49.0 -0.3 99 99 A F H > S+ 0 0 1 2,-0.2 4,-3.2 1,-0.2 5,-0.3 0.903 107.0 55.5 -67.2 -41.4 61.8 46.5 -3.0 100 100 A E H X>S+ 0 0 6 -4,-2.5 4,-3.0 1,-0.2 5,-0.6 0.922 107.7 50.2 -56.3 -44.8 58.4 48.2 -3.0 101 101 A C H X5S+ 0 0 26 -4,-2.3 6,-2.2 1,-0.2 4,-1.3 0.924 114.1 44.0 -61.2 -44.6 60.1 51.5 -3.8 102 102 A K H X5S+ 0 0 83 -4,-1.9 4,-0.6 4,-0.2 -2,-0.2 0.932 122.3 36.1 -65.5 -47.4 62.1 50.0 -6.6 103 103 A I H <5S+ 0 0 42 -4,-3.2 -2,-0.2 2,-0.2 -3,-0.2 0.852 125.2 35.1 -76.8 -39.3 59.2 48.0 -8.2 104 104 A E H <5S+ 0 0 68 -4,-3.0 -3,-0.2 -5,-0.3 -2,-0.1 0.772 132.6 23.6 -89.8 -27.6 56.3 50.3 -7.7 105 105 A R H <