==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-NOV-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT PROTEIN (CYTOCHROME) 09-MAY-95 1CYI . COMPND 2 MOLECULE: CYTOCHROME C6; . SOURCE 2 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; . AUTHOR C.A.KERFELD,T.O.YEATES . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5396.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 66.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 40 44.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 129 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 45.5 26.7 7.3 88.8 2 2 A D > + 0 0 79 72,-0.1 4,-1.4 69,-0.0 76,-0.2 -0.119 360.0 33.2-171.6 -56.8 29.5 7.7 86.3 3 3 A L H > S+ 0 0 84 2,-0.2 4,-1.4 1,-0.1 5,-0.1 0.747 124.6 48.7 -81.2 -30.4 28.4 5.4 83.5 4 4 A A H > S+ 0 0 59 2,-0.2 4,-2.5 1,-0.2 -1,-0.1 0.849 108.1 53.6 -74.4 -34.8 24.8 6.3 84.4 5 5 A L H > S+ 0 0 31 1,-0.2 4,-3.9 2,-0.2 -2,-0.2 0.924 109.0 50.5 -63.1 -43.5 25.8 10.0 84.4 6 6 A G H X S+ 0 0 0 -4,-1.4 4,-3.0 2,-0.2 -1,-0.2 0.834 110.3 47.2 -63.1 -35.7 27.1 9.4 80.9 7 7 A A H X S+ 0 0 21 -4,-1.4 4,-2.5 2,-0.2 -1,-0.2 0.874 113.5 50.7 -72.4 -34.4 23.9 7.8 79.9 8 8 A Q H X S+ 0 0 133 -4,-2.5 4,-2.2 2,-0.2 -2,-0.2 0.953 113.0 44.2 -65.7 -50.8 22.2 10.7 81.5 9 9 A V H X>S+ 0 0 4 -4,-3.9 4,-2.5 2,-0.2 5,-0.6 0.944 112.1 54.2 -60.5 -44.7 24.3 13.2 79.6 10 10 A F H X>S+ 0 0 7 -4,-3.0 4,-2.3 1,-0.2 5,-1.5 0.943 111.3 44.4 -54.0 -51.5 23.9 11.2 76.3 11 11 A N H <5S+ 0 0 108 -4,-2.5 -1,-0.2 3,-0.2 -2,-0.2 0.878 115.7 45.7 -62.7 -40.5 20.1 11.3 76.6 12 12 A G H <5S+ 0 0 62 -4,-2.2 -1,-0.2 -5,-0.2 -2,-0.2 0.886 132.4 11.6 -74.4 -32.3 19.8 14.9 77.5 13 13 A N H <5S+ 0 0 53 -4,-2.5 -3,-0.2 -5,-0.2 -2,-0.2 0.619 129.0 40.3-119.7 -22.9 22.2 16.4 74.9 14 14 A C T >X< S+ 0 0 27 -4,-2.1 3,-2.8 5,-0.2 -2,-0.2 -0.111 70.6 164.9-117.9 32.4 22.7 10.3 67.8 19 19 A M G >< S- 0 0 112 -4,-0.7 3,-1.5 1,-0.3 -4,-0.1 -0.334 78.8 -4.7 -54.8 119.6 19.4 8.6 68.6 20 20 A G G 3 S- 0 0 22 1,-0.3 -1,-0.3 69,-0.1 3,-0.1 0.649 131.1 -61.3 65.6 23.2 20.2 5.0 69.1 21 21 A G G < S+ 0 0 2 -3,-2.8 10,-3.3 1,-0.2 11,-0.3 0.519 108.4 117.5 82.2 10.8 23.8 5.5 68.1 22 22 A R < - 0 0 152 -3,-1.5 2,-0.3 8,-0.2 -1,-0.2 -0.141 64.0-119.5 -97.3-172.2 23.1 6.7 64.6 23 23 A N - 0 0 23 4,-0.3 -5,-0.2 1,-0.1 6,-0.1 -0.748 19.9-176.5-137.8 99.4 23.8 10.1 63.0 24 24 A S S S+ 0 0 88 -7,-2.3 -1,-0.1 -2,-0.3 -6,-0.1 0.796 87.6 42.2 -59.7 -35.1 20.8 12.1 61.7 25 25 A V S S+ 0 0 86 -8,-0.3 -1,-0.2 1,-0.3 3,-0.1 0.828 131.0 19.7 -82.8 -38.9 23.0 14.8 60.2 26 26 A M S > S- 0 0 67 3,-0.1 3,-1.5 1,-0.1 -1,-0.3 -0.702 74.8-164.8-134.6 81.8 25.8 12.8 58.6 27 27 A P T 3 S+ 0 0 84 0, 0.0 -4,-0.3 0, 0.0 3,-0.2 0.688 86.8 52.5 -38.0 -41.4 24.3 9.3 58.2 28 28 A E T 3 S+ 0 0 128 1,-0.2 2,-2.6 -3,-0.1 -3,-0.0 0.894 91.1 78.3 -66.9 -39.9 27.7 7.6 57.6 29 29 A K S < S+ 0 0 94 -3,-1.5 -1,-0.2 -6,-0.1 -3,-0.1 -0.273 73.3 165.1 -73.2 61.5 29.3 9.2 60.8 30 30 A T - 0 0 25 -2,-2.6 -8,-0.2 -3,-0.2 9,-0.1 -0.068 46.1-121.9 -77.4 164.8 27.6 6.6 63.1 31 31 A L S S+ 0 0 16 -10,-3.3 -9,-0.1 4,-0.1 2,-0.1 0.398 74.3 105.5 -92.6 2.6 28.3 5.7 66.8 32 32 A D S > S- 0 0 70 -11,-0.3 4,-2.1 1,-0.1 3,-0.3 -0.418 85.2-100.9 -81.4 160.0 29.0 2.1 66.4 33 33 A K H > S+ 0 0 99 50,-0.5 4,-1.9 1,-0.2 5,-0.2 0.833 116.8 51.5 -43.2 -50.3 32.6 0.7 66.7 34 34 A A H > S+ 0 0 63 2,-0.2 4,-1.1 1,-0.2 -1,-0.2 0.891 111.7 46.6 -60.9 -42.8 33.3 0.2 63.0 35 35 A A H > S+ 0 0 9 -3,-0.3 4,-2.9 1,-0.2 5,-0.4 0.927 110.7 53.5 -66.2 -41.8 32.3 3.8 62.1 36 36 A L H X S+ 0 0 15 -4,-2.1 4,-2.2 1,-0.2 7,-0.2 0.855 106.8 49.5 -61.4 -42.8 34.3 5.2 64.9 37 37 A E H < S+ 0 0 112 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.809 117.4 44.6 -70.0 -22.1 37.6 3.5 63.9 38 38 A Q H < S+ 0 0 133 -4,-1.1 -2,-0.2 -5,-0.2 -1,-0.2 0.906 128.6 19.4 -85.1 -47.4 37.0 4.8 60.4 39 39 A Y H < S+ 0 0 103 -4,-2.9 2,-0.4 -9,-0.1 -3,-0.2 0.607 94.4 100.0-102.1 -20.0 36.0 8.4 61.0 40 40 A L S >< S- 0 0 19 -4,-2.2 3,-2.5 -5,-0.4 2,-0.4 -0.601 76.2-117.4 -79.6 129.0 37.1 9.3 64.5 41 41 A D T 3 S+ 0 0 106 -2,-0.4 11,-0.1 1,-0.3 10,-0.1 -0.503 104.1 13.9 -61.0 119.7 40.3 11.4 64.7 42 42 A G T 3 S- 0 0 64 -2,-0.4 -1,-0.3 -5,-0.1 6,-0.1 0.394 118.8-104.3 92.4 -6.1 42.8 9.3 66.6 43 43 A G < - 0 0 21 -3,-2.5 2,-1.3 -7,-0.2 -6,-0.1 -0.250 65.5 -20.0 88.0-172.1 40.7 6.1 66.2 44 44 A F S S+ 0 0 41 4,-0.1 2,-0.3 3,-0.1 -7,-0.1 -0.637 88.6 116.5 -81.5 95.3 38.4 4.2 68.6 45 45 A K S >> S- 0 0 107 -2,-1.3 4,-1.3 1,-0.1 3,-0.6 -0.974 73.5-114.6-156.7 148.7 39.4 5.2 72.0 46 46 A V H 3> S+ 0 0 32 -2,-0.3 4,-2.2 1,-0.2 5,-0.1 0.860 115.1 57.1 -52.9 -38.9 37.8 6.9 74.9 47 47 A E H 3> S+ 0 0 81 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.804 103.7 51.9 -66.1 -29.4 40.2 9.8 74.6 48 48 A S H <> S+ 0 0 9 -3,-0.6 4,-1.7 2,-0.2 -1,-0.2 0.827 109.3 50.2 -74.1 -34.8 39.3 10.5 70.9 49 49 A I H X S+ 0 0 11 -4,-1.3 4,-2.2 2,-0.2 5,-0.2 0.927 108.9 52.0 -67.8 -45.5 35.6 10.6 71.8 50 50 A I H X S+ 0 0 32 -4,-2.2 4,-2.5 1,-0.2 5,-0.2 0.936 109.0 50.6 -54.2 -50.5 36.3 13.1 74.6 51 51 A Y H X S+ 0 0 137 -4,-1.9 4,-2.0 1,-0.2 5,-0.3 0.870 109.5 49.3 -58.5 -41.4 38.2 15.4 72.2 52 52 A Q H X S+ 0 0 45 -4,-1.7 4,-2.5 2,-0.2 -1,-0.2 0.864 111.4 49.6 -66.8 -36.9 35.5 15.4 69.6 53 53 A V H < S+ 0 0 18 -4,-2.2 10,-2.4 2,-0.2 11,-0.3 0.933 114.7 44.8 -66.7 -45.4 32.8 16.3 72.3 54 54 A E H < S+ 0 0 66 -4,-2.5 10,-0.9 8,-0.2 -2,-0.2 0.845 128.4 26.1 -64.9 -43.5 34.9 19.1 73.7 55 55 A N H < S- 0 0 83 -4,-2.0 7,-0.2 -5,-0.2 -2,-0.2 0.679 94.6-150.8 -93.3 -28.4 35.9 20.6 70.3 56 56 A G < - 0 0 3 -4,-2.5 2,-0.2 -5,-0.3 6,-0.1 -0.207 7.5-128.2 77.7 178.6 33.1 19.5 68.1 57 57 A K B > -A 60 0A 89 3,-2.1 3,-2.9 1,-0.1 -1,-0.1 -0.789 51.8 -41.8-171.5 125.7 33.6 18.9 64.4 58 58 A G T 3 S- 0 0 84 1,-0.3 -1,-0.1 -2,-0.2 0, 0.0 -0.256 131.7 -2.1 56.4-122.6 31.8 20.2 61.4 59 59 A A T 3 S+ 0 0 80 -3,-0.1 -1,-0.3 2,-0.1 -3,-0.0 0.353 116.0 97.6 -78.3 0.3 28.0 20.2 62.0 60 60 A M B < S-A 57 0A 43 -3,-2.9 -3,-2.1 -35,-0.0 2,-0.0 -0.866 75.4-131.9 -93.4 123.6 28.7 18.7 65.4 61 61 A P - 0 0 74 0, 0.0 2,-0.3 0, 0.0 -5,-0.2 -0.262 15.7-111.3 -73.7 154.9 28.7 21.4 68.1 62 62 A A - 0 0 60 -7,-0.2 -8,-0.2 -6,-0.1 -7,-0.1 -0.707 23.7-170.0 -85.7 137.7 31.4 21.8 70.9 63 63 A W >> + 0 0 48 -10,-2.4 4,-3.0 -2,-0.3 3,-1.4 0.273 59.3 100.7-111.8 4.3 30.2 21.0 74.4 64 64 A A T 34 S+ 0 0 45 -10,-0.9 -1,-0.1 -11,-0.3 -10,-0.1 0.777 85.1 48.2 -60.9 -28.2 33.1 22.3 76.4 65 65 A D T 34 S+ 0 0 177 -11,-0.1 -1,-0.3 -3,-0.1 -2,-0.1 0.319 120.6 36.4 -99.2 7.9 31.3 25.5 77.2 66 66 A R T <4 S+ 0 0 131 -3,-1.4 2,-0.2 1,-0.2 -2,-0.2 0.628 112.1 49.7-125.2 -44.2 28.1 23.7 78.3 67 67 A L S < S- 0 0 20 -4,-3.0 -1,-0.2 1,-0.1 2,-0.1 -0.605 80.5-111.0-100.8 163.1 29.2 20.4 80.1 68 68 A S > - 0 0 51 -2,-0.2 4,-2.0 1,-0.1 3,-0.3 -0.486 28.6-113.8 -87.0 161.0 31.7 19.8 82.8 69 69 A E H > S+ 0 0 124 1,-0.2 4,-2.1 2,-0.2 3,-0.4 0.961 119.4 56.0 -59.7 -42.0 35.0 17.9 82.2 70 70 A E H > S+ 0 0 120 1,-0.3 4,-2.0 2,-0.2 -1,-0.2 0.806 108.8 43.7 -56.7 -40.5 33.5 15.2 84.4 71 71 A E H > S+ 0 0 58 -3,-0.3 4,-2.4 2,-0.2 -1,-0.3 0.735 110.4 55.7 -76.7 -30.0 30.4 14.8 82.3 72 72 A I H X S+ 0 0 5 -4,-2.0 4,-1.3 -3,-0.4 -2,-0.2 0.834 110.8 45.3 -69.0 -35.4 32.4 14.9 79.1 73 73 A Q H X S+ 0 0 77 -4,-2.1 4,-2.0 -5,-0.2 -2,-0.2 0.943 113.4 51.4 -68.9 -47.0 34.5 11.9 80.4 74 74 A A H X S+ 0 0 1 -4,-2.0 4,-1.6 1,-0.2 -68,-0.2 0.881 111.5 44.9 -56.9 -47.4 31.3 10.2 81.5 75 75 A V H X S+ 0 0 3 -4,-2.4 4,-2.3 1,-0.2 -1,-0.2 0.806 110.5 54.6 -72.0 -27.3 29.6 10.5 78.2 76 76 A A H X S+ 0 0 0 -4,-1.3 4,-2.7 2,-0.2 -2,-0.2 0.890 108.0 49.4 -70.9 -37.3 32.7 9.4 76.3 77 77 A E H X S+ 0 0 75 -4,-2.0 4,-2.7 2,-0.2 -2,-0.2 0.852 110.2 52.7 -66.1 -38.1 32.9 6.2 78.4 78 78 A Y H X S+ 0 0 41 -4,-1.6 4,-2.5 2,-0.2 5,-0.2 0.942 111.7 43.1 -62.7 -54.6 29.3 5.6 77.7 79 79 A V H X S+ 0 0 12 -4,-2.3 4,-2.0 1,-0.2 5,-0.3 0.925 114.9 51.2 -58.0 -46.1 29.7 5.9 73.9 80 80 A F H X S+ 0 0 56 -4,-2.7 4,-2.3 1,-0.2 -2,-0.2 0.941 113.1 45.4 -57.0 -43.9 32.8 3.9 74.1 81 81 A K H X S+ 0 0 83 -4,-2.7 4,-2.7 1,-0.2 -2,-0.2 0.834 111.1 51.0 -66.9 -43.6 31.0 1.1 76.1 82 82 A Q H X>S+ 0 0 31 -4,-2.5 5,-2.2 2,-0.2 4,-0.6 0.838 113.9 45.2 -61.8 -41.3 27.9 1.0 73.9 83 83 A A H <5S+ 0 0 4 -4,-2.0 -50,-0.5 3,-0.2 -2,-0.2 0.897 114.7 47.2 -72.1 -41.9 30.0 0.6 70.8 84 84 A T H <5S+ 0 0 66 -4,-2.3 -2,-0.2 -5,-0.3 -3,-0.2 0.938 121.5 36.5 -64.7 -47.7 32.3 -2.0 72.3 85 85 A D H <5S- 0 0 96 -4,-2.7 -1,-0.2 -5,-0.2 -2,-0.2 0.570 105.4-132.5 -79.3 -10.2 29.3 -4.0 73.7 86 86 A A T <5 + 0 0 79 -4,-0.6 -3,-0.2 -5,-0.2 -4,-0.1 0.907 54.0 150.8 57.6 44.2 27.3 -3.1 70.6 87 87 A A < + 0 0 44 -5,-2.2 2,-0.2 -6,-0.2 -4,-0.1 0.198 11.5 147.3 -90.5 15.3 24.4 -2.1 72.8 88 88 A W 0 0 47 -6,-0.5 -67,-0.1 1,-0.1 -56,-0.0 -0.403 360.0 360.0 -61.7 124.2 23.0 0.5 70.4 89 89 A K 0 0 118 -2,-0.2 -1,-0.1 0, 0.0 -68,-0.1 -0.317 360.0 360.0 53.6 360.0 19.2 0.6 70.7