==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER NEUROPEPTIDE 14-SEP-99 1D0W . COMPND 2 MOLECULE: C-TERMINAL ANALOGUE OF NEUROPEPTIDE Y, A POTENT . SOURCE 2 SYNTHETIC: YES; . AUTHOR S.YAO,R.S.NORTON . 13 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1900.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 8 61.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 30.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 30.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 24 A X >> 0 0 162 0, 0.0 3,-2.3 0, 0.0 4,-1.6 0.000 360.0 360.0 360.0 40.0 3.9 -1.6 0.7 2 25 A R T 34 + 0 0 230 1,-0.3 4,-0.4 2,-0.2 2,-0.1 0.838 360.0 25.7 -35.4 -58.7 5.9 -4.6 1.9 3 26 A H T 34 S+ 0 0 134 2,-0.1 -1,-0.3 1,-0.1 0, 0.0 -0.315 123.6 56.8-107.9 47.5 8.5 -4.4 -0.8 4 27 A Y T X> S+ 0 0 142 -3,-2.3 3,-2.4 -2,-0.1 4,-1.3 0.473 92.4 53.6-135.4 -65.0 8.1 -0.7 -1.5 5 28 A K H 3X S+ 0 0 94 -4,-1.6 4,-0.6 1,-0.3 -3,-0.1 0.926 114.0 44.3 -46.7 -54.5 8.6 1.6 1.5 6 29 A N H 34 S+ 0 0 87 -5,-0.4 -1,-0.3 -4,-0.4 -4,-0.1 0.226 104.4 68.1 -80.4 21.0 12.1 0.1 2.4 7 30 A L H X> S+ 0 0 88 -3,-2.4 3,-2.6 2,-0.1 4,-0.6 0.827 99.4 43.6-100.8 -57.5 13.2 0.2 -1.3 8 31 A L H 3< S+ 0 0 137 -4,-1.3 4,-0.2 1,-0.3 -2,-0.2 0.759 115.4 56.5 -59.3 -16.1 13.3 4.0 -1.9 9 32 A E T 3< S+ 0 0 67 -4,-0.6 -1,-0.3 -5,-0.3 -2,-0.1 -0.019 89.0 81.6-100.6 27.1 15.0 3.7 1.5 10 33 A R T X4 S+ 0 0 151 -3,-2.6 3,-2.0 2,-0.1 -2,-0.2 0.852 72.1 67.9-100.1 -44.3 17.7 1.2 0.2 11 34 A Q T 3< S+ 0 0 158 -4,-0.6 -2,-0.1 1,-0.3 -1,-0.1 0.838 114.8 31.6 -42.3 -42.7 20.3 3.4 -1.5 12 35 A R T 3 0 0 235 -4,-0.2 -1,-0.3 1,-0.1 -2,-0.1 -0.343 360.0 360.0-114.5 49.8 21.3 4.8 2.0 13 36 A Y < 0 0 215 -3,-2.0 -1,-0.1 -7,-0.0 -3,-0.1 -0.368 360.0 360.0 -88.5 360.0 20.6 1.8 4.1