==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 12-OCT-99 1D5V . COMPND 2 MOLECULE: S12 TRANSCRIPTION FACTOR (FKH-14); . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.J.P.VAN DONGEN,A.CEDERBERG,P.CARLSSON,S.ENERBACK, . 94 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7633.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 47 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 6.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 29.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 226 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 143.2 -22.9 17.6 5.6 2 2 A L - 0 0 103 38,-0.0 2,-0.4 37,-0.0 0, 0.0 -0.925 360.0-168.0-122.8 148.4 -20.2 15.3 4.2 3 3 A V - 0 0 97 -2,-0.3 37,-0.2 0, 0.0 0, 0.0 -0.995 22.5-120.4-136.1 141.1 -16.8 16.2 2.8 4 4 A K - 0 0 134 -2,-0.4 34,-0.0 1,-0.1 0, 0.0 -0.303 41.8 -93.5 -73.6 165.4 -14.3 14.0 0.9 5 5 A P - 0 0 14 0, 0.0 -1,-0.1 0, 0.0 7,-0.1 -0.711 21.6-141.8 -84.4 114.2 -10.7 13.5 2.4 6 6 A P S S+ 0 0 130 0, 0.0 2,-0.1 0, 0.0 -2,-0.0 0.632 73.3 113.0 -48.4 -8.0 -8.2 16.0 1.0 7 7 A Y S S- 0 0 111 1,-0.1 2,-0.0 4,-0.1 0, 0.0 -0.448 74.1-120.5 -68.8 138.9 -5.8 13.0 1.1 8 8 A S > - 0 0 77 -2,-0.1 4,-2.8 1,-0.1 5,-0.2 -0.296 26.1-106.0 -73.8 164.6 -4.8 11.9 -2.3 9 9 A Y H > S+ 0 0 106 1,-0.2 4,-2.0 2,-0.2 5,-0.2 0.918 124.3 50.3 -59.9 -39.1 -5.6 8.3 -3.4 10 10 A I H > S+ 0 0 61 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.919 110.7 49.1 -66.0 -40.0 -1.9 7.4 -3.0 11 11 A A H > S+ 0 0 31 2,-0.2 4,-2.9 1,-0.2 5,-0.2 0.923 107.8 54.0 -66.9 -40.3 -1.9 8.9 0.5 12 12 A L H X S+ 0 0 6 -4,-2.8 4,-2.8 1,-0.2 5,-0.2 0.948 108.3 49.5 -60.1 -43.8 -5.1 7.0 1.5 13 13 A I H X S+ 0 0 2 -4,-2.0 4,-1.5 -5,-0.2 -1,-0.2 0.933 112.4 48.8 -60.0 -42.0 -3.5 3.8 0.5 14 14 A T H X S+ 0 0 47 -4,-2.0 4,-1.3 1,-0.2 -2,-0.2 0.903 112.5 47.1 -65.6 -40.0 -0.4 4.8 2.6 15 15 A M H X S+ 0 0 60 -4,-2.9 4,-2.7 1,-0.2 5,-0.2 0.913 105.1 59.6 -70.0 -40.0 -2.6 5.7 5.6 16 16 A A H < S+ 0 0 0 -4,-2.8 4,-0.4 -5,-0.2 -1,-0.2 0.916 105.2 49.6 -55.6 -42.6 -4.7 2.4 5.4 17 17 A I H >< S+ 0 0 6 -4,-1.5 3,-0.6 -5,-0.2 -1,-0.2 0.914 111.4 49.4 -64.5 -40.3 -1.5 0.4 5.9 18 18 A Q H 3< S+ 0 0 135 -4,-1.3 -2,-0.2 1,-0.2 -1,-0.2 0.914 117.9 38.4 -66.6 -41.8 -0.5 2.5 8.9 19 19 A N T 3< S+ 0 0 61 -4,-2.7 -1,-0.2 4,-0.0 -2,-0.2 0.358 89.5 115.8 -90.8 7.9 -3.9 2.2 10.6 20 20 A A < - 0 0 5 -3,-0.6 4,-0.0 -4,-0.4 10,-0.0 -0.669 69.3-138.0 -79.2 116.6 -4.3 -1.5 9.4 21 21 A P S S+ 0 0 135 0, 0.0 2,-0.4 0, 0.0 -1,-0.2 0.797 98.4 42.8 -43.0 -26.8 -4.4 -3.7 12.6 22 22 A E S S- 0 0 127 1,-0.1 -2,-0.0 -3,-0.0 -3,-0.0 -0.977 80.5-141.9-122.9 131.7 -2.1 -5.9 10.5 23 23 A K S S+ 0 0 125 -2,-0.4 2,-0.7 1,-0.1 -1,-0.1 0.933 95.3 64.3 -60.1 -40.0 0.8 -4.5 8.4 24 24 A K S S+ 0 0 100 53,-0.1 2,-0.4 -3,-0.1 55,-0.1 -0.728 73.5 169.7 -86.0 117.8 -0.0 -7.1 5.7 25 25 A I B -A 78 0A 25 53,-0.9 53,-1.0 -2,-0.7 2,-0.1 -0.965 30.9-119.1-129.9 145.7 -3.6 -6.4 4.4 26 26 A T > - 0 0 25 -2,-0.4 4,-1.8 51,-0.2 51,-0.1 -0.381 28.0-112.6 -79.6 162.4 -5.4 -7.8 1.4 27 27 A L H > S+ 0 0 42 1,-0.2 4,-1.2 2,-0.2 3,-0.1 0.935 121.0 49.6 -60.0 -43.3 -6.6 -5.6 -1.5 28 28 A N H > S+ 0 0 119 1,-0.2 4,-1.4 2,-0.2 3,-0.3 0.906 105.6 57.3 -63.5 -40.0 -10.2 -6.3 -0.4 29 29 A G H > S+ 0 0 18 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.892 99.2 59.7 -60.3 -38.5 -9.4 -5.4 3.2 30 30 A I H X S+ 0 0 1 -4,-1.8 4,-1.8 1,-0.2 -1,-0.2 0.920 101.3 54.1 -60.0 -40.3 -8.2 -1.9 2.2 31 31 A Y H X S+ 0 0 12 -4,-1.2 4,-2.0 -3,-0.3 -1,-0.2 0.936 105.5 53.7 -60.3 -42.8 -11.7 -1.1 0.7 32 32 A Q H X S+ 0 0 127 -4,-1.4 4,-1.9 1,-0.2 5,-0.2 0.917 105.8 53.1 -60.0 -41.3 -13.4 -2.0 4.0 33 33 A F H X S+ 0 0 45 -4,-1.8 4,-2.9 1,-0.2 5,-0.4 0.955 108.7 48.8 -60.0 -49.1 -11.1 0.4 6.0 34 34 A I H X S+ 0 0 3 -4,-1.8 4,-2.5 1,-0.2 7,-0.3 0.905 108.0 55.1 -60.0 -40.0 -11.9 3.4 3.7 35 35 A M H < S+ 0 0 53 -4,-2.0 -1,-0.2 -5,-0.2 7,-0.2 0.935 115.8 37.6 -60.8 -44.0 -15.7 2.7 3.9 36 36 A D H < S+ 0 0 116 -4,-1.9 -2,-0.2 -5,-0.2 -1,-0.2 0.964 121.4 42.4 -74.0 -52.1 -15.6 2.8 7.8 37 37 A R H < S+ 0 0 168 -4,-2.9 -3,-0.2 1,-0.3 -2,-0.2 0.954 132.5 23.7 -60.1 -46.7 -13.0 5.7 8.2 38 38 A F >< - 0 0 28 -4,-2.5 3,-0.6 -5,-0.4 -1,-0.3 -0.941 65.1-176.3-122.8 109.5 -14.7 7.6 5.3 39 39 A P T >> S+ 0 0 59 0, 0.0 3,-0.9 0, 0.0 4,-0.8 0.561 70.0 86.5 -81.9 -7.5 -18.4 6.8 4.7 40 40 A F H >> S+ 0 0 26 1,-0.3 4,-0.9 -37,-0.2 3,-0.6 0.881 84.2 59.3 -59.9 -34.3 -18.7 9.2 1.7 41 41 A Y H <4 S+ 0 0 22 -3,-0.6 -1,-0.3 -7,-0.3 7,-0.1 0.804 90.7 69.5 -66.2 -26.9 -17.4 6.3 -0.5 42 42 A R H <4 S+ 0 0 153 -3,-0.9 3,-0.2 1,-0.2 -1,-0.2 0.921 94.7 54.8 -60.0 -39.0 -20.4 4.1 0.5 43 43 A E H << S+ 0 0 137 -4,-0.8 2,-0.6 -3,-0.6 -1,-0.2 0.927 119.7 34.4 -60.0 -39.8 -22.6 6.4 -1.5 44 44 A N < + 0 0 107 -4,-0.9 -1,-0.3 1,-0.1 4,-0.2 -0.907 67.9 157.8-118.1 105.0 -20.4 5.8 -4.5 45 45 A K > + 0 0 134 -2,-0.6 4,-1.1 -3,-0.2 3,-0.4 0.922 58.6 62.0 -90.9 -59.9 -18.9 2.2 -4.6 46 46 A Q T 4 S+ 0 0 178 1,-0.2 2,-0.2 2,-0.1 -1,-0.0 -0.450 99.9 35.5 -69.7 140.0 -18.0 1.6 -8.3 47 47 A G T > S+ 0 0 45 -2,-0.1 4,-1.1 -3,-0.0 -1,-0.2 -0.442 113.5 50.9 116.9 -59.9 -15.3 4.0 -9.7 48 48 A W H > S+ 0 0 16 -3,-0.4 4,-1.5 -2,-0.2 -2,-0.1 0.810 102.4 60.7 -82.3 -28.9 -13.0 4.6 -6.7 49 49 A Q H X S+ 0 0 37 -4,-1.1 4,-1.0 1,-0.2 -1,-0.2 0.924 107.1 45.7 -64.9 -41.1 -12.5 0.9 -5.9 50 50 A N H > S+ 0 0 93 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.889 106.2 58.3 -70.1 -39.5 -10.9 0.2 -9.3 51 51 A S H X S+ 0 0 55 -4,-1.1 4,-1.9 1,-0.2 5,-0.2 0.918 101.8 55.6 -60.0 -40.0 -8.6 3.3 -9.3 52 52 A I H X S+ 0 0 0 -4,-1.5 4,-2.0 1,-0.2 -1,-0.2 0.917 107.7 49.1 -60.0 -40.1 -6.9 2.1 -6.1 53 53 A R H < S+ 0 0 101 -4,-1.0 -1,-0.2 1,-0.2 -2,-0.2 0.895 105.7 57.9 -67.2 -37.3 -6.1 -1.2 -7.8 54 54 A H H X S+ 0 0 121 -4,-2.0 4,-1.1 1,-0.2 -1,-0.2 0.939 109.7 43.5 -60.0 -44.2 -4.7 0.6 -10.9 55 55 A N H X S+ 0 0 41 -4,-1.9 2,-3.7 1,-0.2 4,-1.6 0.905 97.7 76.5 -68.8 -38.6 -2.2 2.4 -8.7 56 56 A L H < S+ 0 0 10 -4,-2.0 -1,-0.2 -5,-0.2 -2,-0.1 -0.200 105.6 32.6 -69.6 59.0 -1.3 -0.8 -6.7 57 57 A S H 4 S+ 0 0 77 -2,-3.7 -1,-0.2 -3,-0.1 -2,-0.2 0.065 112.9 50.4-172.6 -55.6 0.8 -2.0 -9.6 58 58 A L H < S+ 0 0 111 -4,-1.1 2,-0.4 2,-0.1 -2,-0.1 0.918 97.5 78.6 -67.6 -40.0 2.5 0.8 -11.5 59 59 A N < - 0 0 58 -4,-1.6 3,-0.4 1,-0.2 0, 0.0 -0.543 63.8-166.9 -71.4 123.4 3.8 2.2 -8.3 60 60 A E S S+ 0 0 167 -2,-0.4 -1,-0.2 1,-0.2 -2,-0.1 0.466 72.0 88.2 -90.1 0.0 6.8 0.1 -7.3 61 61 A C S S+ 0 0 97 19,-0.1 20,-0.9 2,-0.0 -1,-0.2 0.910 78.3 69.3 -64.8 -40.1 6.8 1.7 -3.8 62 62 A F E S-B 80 0A 19 -3,-0.4 2,-0.5 18,-0.1 18,-0.2 -0.497 76.7-145.1 -79.1 150.4 4.4 -1.0 -2.5 63 63 A V E -B 79 0A 29 16,-2.4 16,-1.1 -2,-0.1 2,-0.5 -0.959 4.7-144.3-118.7 127.3 5.6 -4.6 -2.1 64 64 A K E +B 78 0A 109 -2,-0.5 14,-0.2 14,-0.2 12,-0.0 -0.778 20.6 175.3 -92.4 125.0 3.3 -7.6 -2.8 65 65 A V - 0 0 49 12,-1.0 11,-0.1 -2,-0.5 13,-0.1 -0.678 12.2-166.1-130.1 79.4 4.0 -10.6 -0.5 66 66 A P - 0 0 66 0, 0.0 10,-0.1 0, 0.0 3,-0.1 -0.238 22.9-114.5 -63.0 151.7 1.4 -13.3 -1.2 67 67 A R - 0 0 62 1,-0.2 2,-0.1 4,-0.1 10,-0.1 0.020 57.9 -56.3 -72.2-168.6 1.0 -16.1 1.4 68 68 A D > - 0 0 125 1,-0.1 3,-0.6 4,-0.0 -1,-0.2 -0.404 44.5-128.4 -70.2 148.7 1.9 -19.7 0.3 69 69 A D T 3 S+ 0 0 157 1,-0.2 -1,-0.1 -3,-0.1 -2,-0.1 0.760 103.5 73.7 -70.0 -20.7 0.1 -21.0 -2.7 70 70 A K T 3 S+ 0 0 190 2,-0.0 -1,-0.2 1,-0.0 -2,-0.0 0.914 86.1 69.5 -60.1 -40.1 -0.9 -24.1 -0.7 71 71 A K S < S- 0 0 114 -3,-0.6 -4,-0.1 1,-0.1 -1,-0.0 -0.684 77.8-158.0 -81.4 123.5 -3.5 -22.0 1.3 72 72 A P + 0 0 108 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.122 57.6 50.3 -82.2-157.8 -6.4 -21.0 -1.0 73 73 A G S S+ 0 0 79 2,-0.1 -2,-0.0 0, 0.0 2,-0.0 -0.479 107.2 34.5 67.3-124.1 -8.9 -18.1 -0.5 74 74 A K + 0 0 127 -2,-0.3 3,-0.1 1,-0.1 -7,-0.0 -0.340 60.6 164.6 -62.7 141.5 -6.9 -14.9 0.1 75 75 A G + 0 0 41 1,-0.1 2,-0.3 -9,-0.1 -1,-0.1 -0.021 47.0 73.0-150.7 36.9 -3.6 -14.8 -1.8 76 76 A S + 0 0 48 -10,-0.1 2,-0.3 -11,-0.1 -49,-0.2 -0.949 46.0 179.7-156.4 134.7 -2.4 -11.1 -1.7 77 77 A Y - 0 0 37 -2,-0.3 -12,-1.0 -51,-0.1 2,-0.4 -0.940 14.3-147.9-132.5 155.6 -0.9 -8.8 0.9 78 78 A W E +AB 25 64A 16 -53,-1.0 -53,-0.9 -2,-0.3 2,-0.3 -0.980 28.9 146.0-126.5 134.8 0.3 -5.2 0.8 79 79 A T E - B 0 63A 17 -16,-1.1 -16,-2.4 -2,-0.4 2,-0.6 -0.989 48.8 -97.6-159.0 164.3 3.2 -3.7 2.8 80 80 A L E + B 0 62A 88 -2,-0.3 -18,-0.1 -18,-0.2 -19,-0.1 -0.778 61.1 129.7 -92.0 122.1 6.0 -1.0 2.6 81 81 A D - 0 0 80 -20,-0.9 -2,-0.1 -2,-0.6 0, 0.0 -0.987 48.8-117.0-164.5 157.6 9.4 -2.5 1.6 82 82 A P - 0 0 93 0, 0.0 2,-2.9 0, 0.0 -21,-0.0 0.029 66.2 -58.3 -83.3-162.3 12.3 -2.1 -0.9 83 83 A D S S+ 0 0 141 1,-0.2 2,-1.4 2,-0.0 3,-0.4 -0.283 75.7 153.9 -77.2 59.3 13.4 -4.5 -3.5 84 84 A S + 0 0 43 -2,-2.9 -1,-0.2 1,-0.2 4,-0.1 -0.212 20.0 127.9 -83.5 49.0 14.0 -7.1 -0.8 85 85 A Y S S+ 0 0 196 -2,-1.4 -1,-0.2 1,-0.2 3,-0.2 0.985 89.0 8.7 -69.4 -57.2 13.5 -10.0 -3.2 86 86 A N S > S+ 0 0 114 -3,-0.4 3,-1.3 1,-0.2 -1,-0.2 0.136 91.6 115.4-110.0 20.0 16.7 -11.9 -2.3 87 87 A M T 3 + 0 0 94 1,-0.3 -1,-0.2 -4,-0.1 -2,-0.1 0.478 50.3 98.2 -69.1 6.2 17.8 -9.8 0.7 88 88 A F T 3 S+ 0 0 165 -3,-0.2 2,-0.4 -4,-0.1 -1,-0.3 0.914 81.6 49.5 -60.0 -40.0 17.2 -13.1 2.6 89 89 A E S < S- 0 0 100 -3,-1.3 2,-0.3 2,-0.0 4,-0.1 -0.822 73.7-171.5-102.7 139.6 21.0 -13.8 2.4 90 90 A N + 0 0 122 -2,-0.4 4,-0.1 1,-0.1 -3,-0.0 -0.937 64.6 33.7-129.2 151.9 23.6 -11.1 3.4 91 91 A G S S+ 0 0 67 2,-0.5 -1,-0.1 -2,-0.3 3,-0.1 0.268 90.4 98.2 89.1 -13.7 27.4 -11.0 3.0 92 92 A S S S+ 0 0 96 1,-0.1 2,-0.3 2,-0.0 -2,-0.1 0.731 89.4 33.9 -77.9 -20.0 27.0 -13.0 -0.2 93 93 A F 0 0 104 -4,-0.1 -2,-0.5 0, 0.0 -1,-0.1 -0.988 360.0 360.0-135.8 145.7 27.3 -9.7 -2.2 94 94 A L 0 0 211 -2,-0.3 -4,-0.0 -4,-0.1 -2,-0.0 -0.931 360.0 360.0-117.7 360.0 29.2 -6.5 -1.5