==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIBIOTIC 28-OCT-05 2D56 . COMPND 2 MOLECULE: ASABF; . SOURCE 2 ORGANISM_SCIENTIFIC: ASCARIS SUUM; . AUTHOR M.NAKANO,T.AIZAWA,M.KAMIYA,K.MIURA,Y.KUMAKI,M.DEMURA, . 53 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4634.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 32 60.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 9.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 9.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 20.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 110 0, 0.0 2,-0.4 0, 0.0 49,-0.0 0.000 360.0 360.0 360.0 -41.0 -5.0 10.4 0.9 2 2 A V > - 0 0 107 3,-0.1 2,-1.3 2,-0.0 3,-0.5 -0.840 360.0-171.3-135.4 97.6 -3.7 10.9 -2.6 3 3 A D T 3 + 0 0 125 -2,-0.4 3,-0.1 1,-0.2 0, 0.0 -0.672 64.0 78.9 -90.3 85.9 -4.5 8.2 -5.2 4 4 A F T 3 S+ 0 0 203 -2,-1.3 2,-0.3 1,-0.6 -1,-0.2 0.372 86.5 38.1-151.3 -47.0 -2.4 9.3 -8.2 5 5 A S < + 0 0 81 -3,-0.5 -1,-0.6 2,-0.0 -3,-0.1 -0.809 47.2 169.1-117.2 158.6 1.2 8.2 -7.7 6 6 A S S S- 0 0 68 -2,-0.3 32,-0.1 -3,-0.1 -3,-0.0 -0.417 77.1 -37.0-170.0 83.8 2.8 5.1 -6.2 7 7 A a S S+ 0 0 51 30,-0.3 3,-0.4 1,-0.1 5,-0.1 0.945 78.2 153.6 60.8 50.3 6.5 4.5 -6.7 8 8 A A + 0 0 67 1,-0.2 -1,-0.1 2,-0.1 -3,-0.0 -0.042 46.6 89.8 -98.6 30.6 6.6 5.9 -10.2 9 9 A R S S- 0 0 198 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 0.779 72.1-154.1 -93.7 -33.4 10.2 6.9 -10.0 10 10 A M + 0 0 166 -3,-0.4 -2,-0.1 1,-0.1 -3,-0.0 0.817 59.2 119.3 61.4 30.9 11.7 3.6 -11.3 11 11 A D + 0 0 91 3,-0.0 -1,-0.1 0, 0.0 -3,-0.0 0.764 49.4 84.3 -94.2 -32.0 14.9 4.3 -9.3 12 12 A V S S- 0 0 43 1,-0.1 30,-0.0 -5,-0.1 0, 0.0 -0.252 97.9-100.8 -69.3 159.7 14.7 1.2 -7.1 13 13 A P - 0 0 126 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.826 65.8 -96.5 -49.4 -35.8 16.2 -2.1 -8.3 14 14 A G S > S+ 0 0 43 0, 0.0 3,-1.0 0, 0.0 4,-0.4 0.195 105.7 98.3 136.3 -15.1 12.6 -3.2 -9.0 15 15 A L T >> + 0 0 114 1,-0.2 4,-2.9 2,-0.2 3,-0.7 0.704 64.4 83.2 -73.2 -19.7 11.6 -5.2 -5.9 16 16 A S H 3> S+ 0 0 17 1,-0.3 4,-1.2 2,-0.2 -1,-0.2 0.766 85.3 59.9 -54.6 -25.5 9.8 -2.1 -4.6 17 17 A K H <> S+ 0 0 152 -3,-1.0 4,-1.1 2,-0.2 -1,-0.3 0.914 112.1 35.2 -70.0 -44.1 6.9 -3.2 -6.8 18 18 A V H <> S+ 0 0 97 -3,-0.7 4,-1.6 -4,-0.4 5,-0.2 0.807 114.1 58.5 -79.0 -31.4 6.5 -6.5 -5.0 19 19 A A H X S+ 0 0 40 -4,-2.9 4,-1.3 1,-0.2 -2,-0.2 0.795 113.1 39.5 -68.3 -27.4 7.5 -5.0 -1.6 20 20 A Q H X S+ 0 0 40 -4,-1.2 4,-2.3 -5,-0.3 5,-0.3 0.724 107.6 63.6 -91.8 -25.5 4.6 -2.6 -1.9 21 21 A G H X S+ 0 0 33 -4,-1.1 4,-1.4 2,-0.2 -2,-0.2 0.858 112.9 35.0 -65.5 -34.0 2.3 -5.2 -3.4 22 22 A L H X S+ 0 0 100 -4,-1.6 4,-3.1 2,-0.2 5,-0.3 0.858 115.8 54.0 -85.7 -41.4 2.5 -7.2 -0.2 23 23 A b H X S+ 0 0 27 -4,-1.3 4,-1.4 -5,-0.2 -2,-0.2 0.848 114.7 43.3 -61.8 -34.2 2.7 -4.2 2.1 24 24 A I H X S+ 0 0 53 -4,-2.3 4,-1.3 11,-0.2 -1,-0.2 0.918 116.8 44.1 -77.6 -46.9 -0.5 -2.9 0.5 25 25 A S H X S+ 0 0 79 -4,-1.4 4,-1.3 -5,-0.3 -2,-0.2 0.934 116.5 46.8 -63.8 -47.7 -2.4 -6.2 0.4 26 26 A S H >< S+ 0 0 73 -4,-3.1 3,-0.5 1,-0.2 4,-0.3 0.932 117.4 41.8 -60.3 -49.0 -1.4 -7.1 4.0 27 27 A c H 3<>S+ 0 0 24 -4,-1.4 5,-0.6 -5,-0.3 3,-0.4 0.679 111.5 58.5 -73.2 -17.1 -2.3 -3.7 5.4 28 28 A K H ><5S+ 0 0 97 -4,-1.3 3,-2.6 1,-0.2 -1,-0.2 0.720 82.8 81.9 -83.2 -23.0 -5.4 -3.7 3.3 29 29 A F T <<5S+ 0 0 173 -4,-1.3 -1,-0.2 -3,-0.5 -2,-0.2 0.805 89.9 54.3 -50.9 -31.6 -6.7 -6.9 4.8 30 30 A Q T 3 5S- 0 0 115 -3,-0.4 -1,-0.3 -4,-0.3 -2,-0.2 0.646 105.8-133.0 -78.4 -15.3 -8.0 -4.7 7.7 31 31 A N T < 5S+ 0 0 106 -3,-2.6 21,-0.4 2,-0.2 -3,-0.1 0.793 92.2 74.5 67.1 28.1 -9.9 -2.5 5.2 32 32 A d S