==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION, DNA BINDING PROTEIN 24-NOV-05 2D7L . COMPND 2 MOLECULE: WD REPEAT AND HMG-BOX DNA BINDING PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.TOMIZAWA,T.KIGAWA,K.SAITO,S.KOSHIBA,M.INOUE,Y.O.KAMATARI, . 81 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7104.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 54.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 12.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 30 37.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 141 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 105.5 17.3 8.2 16.3 2 2 A S - 0 0 127 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.993 360.0-165.9-135.4 128.4 16.3 7.5 12.7 3 3 A S + 0 0 137 -2,-0.4 2,-0.3 2,-0.0 0, 0.0 -0.897 35.0 94.0-115.0 142.3 13.2 5.8 11.4 4 4 A G - 0 0 76 -2,-0.4 2,-0.3 2,-0.0 -2,-0.0 -0.943 62.1 -73.5 175.0-153.9 12.6 4.5 7.9 5 5 A S - 0 0 96 -2,-0.3 2,-0.7 3,-0.0 -2,-0.0 -1.000 22.4-146.9-140.7 140.2 12.8 1.5 5.6 6 6 A S S S- 0 0 91 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.896 75.9 -48.5-110.8 107.0 15.7 -0.3 3.9 7 7 A G S S+ 0 0 93 -2,-0.7 -1,-0.1 1,-0.1 0, 0.0 0.811 94.8 159.5 36.9 39.9 14.9 -1.8 0.5 8 8 A R - 0 0 186 1,-0.1 -1,-0.1 0, 0.0 -3,-0.0 -0.559 39.6-109.3 -91.4 156.1 11.8 -3.2 2.2 9 9 A P - 0 0 107 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.067 36.1 -97.6 -69.8-174.4 8.6 -4.4 0.3 10 10 A K - 0 0 111 50,-0.5 2,-0.2 51,-0.1 0, 0.0 -0.782 29.4-149.0-110.7 155.0 5.2 -2.7 0.4 11 11 A T >> - 0 0 70 -2,-0.3 4,-1.8 49,-0.1 3,-0.5 -0.710 34.9 -98.0-117.3 169.4 2.1 -3.4 2.5 12 12 A G H 3> S+ 0 0 6 1,-0.3 4,-2.4 -2,-0.2 5,-0.3 0.837 125.8 51.4 -54.0 -34.8 -1.6 -3.1 2.0 13 13 A F H 3> S+ 0 0 34 1,-0.2 4,-2.6 2,-0.2 5,-0.3 0.836 106.1 54.3 -71.9 -33.7 -1.5 0.2 3.8 14 14 A Q H <> S+ 0 0 87 -3,-0.5 4,-1.0 2,-0.2 -2,-0.2 0.831 113.4 42.6 -69.1 -32.8 1.3 1.5 1.6 15 15 A M H X S+ 0 0 45 -4,-1.8 4,-0.6 2,-0.2 -2,-0.2 0.924 121.9 37.5 -78.8 -48.3 -0.7 0.8 -1.5 16 16 A W H >X S+ 0 0 5 -4,-2.4 4,-2.2 2,-0.2 3,-0.8 0.938 116.0 52.5 -69.1 -48.3 -4.1 2.1 -0.2 17 17 A L H 3X S+ 0 0 22 -4,-2.6 4,-2.5 1,-0.3 -1,-0.2 0.895 113.9 43.7 -54.6 -42.9 -2.6 5.0 1.7 18 18 A E H 3< S+ 0 0 81 -4,-1.0 -1,-0.3 -5,-0.3 4,-0.2 0.624 118.7 45.8 -77.9 -13.5 -0.7 6.1 -1.4 19 19 A E H << S+ 0 0 110 -3,-0.8 -2,-0.2 -4,-0.6 -1,-0.2 0.569 123.2 33.3-102.4 -14.8 -3.9 5.5 -3.4 20 20 A N H >X S+ 0 0 35 -4,-2.2 4,-2.2 2,-0.1 3,-1.7 0.629 93.2 87.9-111.4 -24.9 -6.2 7.3 -1.0 21 21 A R H 3X S+ 0 0 110 -4,-2.5 4,-1.9 -5,-0.4 5,-0.2 0.868 89.9 52.8 -41.5 -46.4 -3.9 10.0 0.3 22 22 A S H 3> S+ 0 0 62 1,-0.2 4,-1.8 -4,-0.2 -1,-0.3 0.841 109.8 48.5 -61.0 -33.9 -5.0 12.1 -2.6 23 23 A N H <> S+ 0 0 97 -3,-1.7 4,-0.7 2,-0.2 -1,-0.2 0.802 107.3 55.6 -76.1 -30.4 -8.6 11.5 -1.6 24 24 A I H X S+ 0 0 0 -4,-2.2 4,-2.0 2,-0.2 -2,-0.2 0.859 110.2 45.2 -70.0 -36.4 -7.8 12.4 2.0 25 25 A L H < S+ 0 0 44 -4,-1.9 -2,-0.2 -5,-0.3 -1,-0.2 0.935 100.6 65.2 -72.5 -48.4 -6.4 15.8 1.1 26 26 A S H < S+ 0 0 109 -4,-1.8 -1,-0.2 1,-0.3 -2,-0.2 0.796 115.8 33.4 -44.3 -31.6 -9.3 16.7 -1.3 27 27 A D H < S+ 0 0 109 -4,-0.7 -1,-0.3 1,-0.2 -2,-0.2 0.820 133.0 28.8 -93.8 -39.3 -11.4 16.7 1.8 28 28 A N >< + 0 0 52 -4,-2.0 3,-1.1 -5,-0.1 -1,-0.2 -0.795 58.8 170.5-128.2 89.6 -8.8 17.9 4.3 29 29 A P T 3 + 0 0 93 0, 0.0 -1,-0.1 0, 0.0 -4,-0.1 0.677 66.8 86.5 -69.7 -17.7 -6.2 20.2 2.7 30 30 A D T 3 + 0 0 135 -5,-0.1 2,-0.4 -3,-0.1 -5,-0.1 0.833 64.5 99.4 -51.8 -34.3 -4.9 21.1 6.2 31 31 A F < + 0 0 29 -3,-1.1 3,-0.1 1,-0.2 -3,-0.0 -0.407 37.1 155.0 -60.4 112.8 -2.8 18.0 5.9 32 32 A S + 0 0 119 -2,-0.4 2,-0.4 1,-0.1 -1,-0.2 0.453 58.6 55.3-117.2 -9.1 0.7 19.3 4.9 33 33 A D S >> S- 0 0 109 1,-0.1 4,-1.3 0, 0.0 3,-1.2 -0.966 77.0-129.1-129.5 145.2 2.8 16.4 6.3 34 34 A E H 3> S+ 0 0 130 -2,-0.4 4,-3.0 1,-0.3 5,-0.3 0.833 107.4 68.2 -57.9 -33.2 2.6 12.6 5.8 35 35 A A H 3> S+ 0 0 70 1,-0.3 4,-1.4 2,-0.2 -1,-0.3 0.860 104.8 41.6 -54.9 -37.6 2.5 12.2 9.5 36 36 A D H <> S+ 0 0 61 -3,-1.2 4,-0.7 2,-0.2 -1,-0.3 0.762 113.8 53.0 -81.2 -27.1 -0.9 13.8 9.6 37 37 A I H X S+ 0 0 18 -4,-1.3 4,-2.4 2,-0.2 -2,-0.2 0.837 108.4 49.9 -76.2 -34.5 -2.0 11.8 6.4 38 38 A I H X S+ 0 0 50 -4,-3.0 4,-2.4 2,-0.2 5,-0.3 0.942 102.6 58.4 -69.0 -49.3 -1.0 8.5 7.9 39 39 A K H < S+ 0 0 110 -4,-1.4 4,-0.4 -5,-0.3 -1,-0.2 0.808 115.5 39.2 -50.4 -31.2 -2.9 9.0 11.2 40 40 A E H >X S+ 0 0 34 -4,-0.7 4,-1.6 2,-0.2 3,-0.9 0.869 108.5 59.2 -86.9 -42.6 -6.0 9.4 9.1 41 41 A G H 3X S+ 0 0 0 -4,-2.4 4,-2.0 1,-0.3 -2,-0.2 0.826 103.5 54.4 -55.9 -32.8 -5.2 6.7 6.5 42 42 A M H 3X S+ 0 0 106 -4,-2.4 4,-1.7 2,-0.2 -1,-0.3 0.804 103.5 56.1 -71.6 -29.7 -5.1 4.1 9.3 43 43 A I H <4 S+ 0 0 70 -3,-0.9 4,-0.4 -4,-0.4 -2,-0.2 0.870 116.8 34.3 -69.7 -37.7 -8.6 5.2 10.4 44 44 A R H < S+ 0 0 79 -4,-1.6 -2,-0.2 2,-0.2 -1,-0.2 0.739 118.2 53.2 -87.7 -26.4 -10.1 4.5 7.0 45 45 A F H < S+ 0 0 39 -4,-2.0 3,-0.5 -5,-0.3 -2,-0.2 0.774 106.5 52.8 -78.4 -27.8 -7.8 1.6 6.3 46 46 A R S < S+ 0 0 164 -4,-1.7 -1,-0.2 1,-0.2 -2,-0.2 0.709 111.9 45.8 -79.4 -21.4 -8.8 -0.1 9.5 47 47 A V S S+ 0 0 92 -4,-0.4 -1,-0.2 -5,-0.1 -2,-0.2 0.288 87.5 129.6-102.3 7.4 -12.4 0.2 8.6 48 48 A L S S- 0 0 17 -3,-0.5 2,-0.1 1,-0.1 -3,-0.1 -0.084 72.2 -79.8 -58.2 162.4 -11.9 -1.1 5.1 49 49 A S > - 0 0 56 1,-0.1 4,-2.4 4,-0.1 5,-0.2 -0.418 39.5-113.3 -68.1 137.7 -14.1 -3.8 3.7 50 50 A T H > S+ 0 0 106 1,-0.3 4,-1.0 2,-0.2 -1,-0.1 0.752 123.0 44.0 -40.6 -26.8 -13.1 -7.4 4.8 51 51 A E H > S+ 0 0 131 2,-0.2 4,-2.9 3,-0.1 -1,-0.3 0.885 107.0 55.8 -87.1 -45.4 -12.3 -7.7 1.1 52 52 A E H > S+ 0 0 85 2,-0.2 4,-3.2 1,-0.2 5,-0.3 0.895 108.4 51.1 -53.9 -43.3 -10.5 -4.4 0.5 53 53 A R H X S+ 0 0 109 -4,-2.4 4,-2.4 2,-0.2 5,-0.2 0.991 113.7 39.9 -58.4 -66.8 -8.1 -5.2 3.3 54 54 A K H X S+ 0 0 120 -4,-1.0 4,-0.9 -5,-0.2 -1,-0.2 0.855 118.6 52.4 -51.9 -37.5 -7.0 -8.7 2.1 55 55 A V H >X S+ 0 0 44 -4,-2.9 3,-2.0 2,-0.2 4,-1.9 0.991 109.0 44.4 -63.1 -63.9 -7.0 -7.3 -1.4 56 56 A W H 3X S+ 0 0 34 -4,-3.2 4,-1.8 1,-0.3 -1,-0.2 0.824 112.2 56.4 -50.8 -33.5 -4.8 -4.3 -0.9 57 57 A A H 3< S+ 0 0 45 -4,-2.4 4,-0.5 -5,-0.3 -1,-0.3 0.760 109.3 45.3 -70.8 -25.2 -2.6 -6.6 1.1 58 58 A N H < S+ 0 0 84 -4,-1.9 3,-0.7 1,-0.2 -2,-0.2 0.955 104.0 49.4 -70.7 -52.4 -1.7 -6.0 -4.3 60 60 A A T 3< S+ 0 0 14 -4,-1.8 -50,-0.5 1,-0.2 -1,-0.2 0.820 99.4 71.6 -56.6 -31.8 1.4 -4.6 -2.5 61 61 A K T 34 S- 0 0 137 -4,-0.5 -1,-0.2 -5,-0.2 -2,-0.2 0.934 101.6-130.5 -50.1 -53.6 2.8 -8.2 -2.5 62 62 A G S << S+ 0 0 43 -4,-0.9 3,-0.3 -3,-0.7 -1,-0.1 -0.177 72.3 90.7 128.8 -41.8 3.4 -8.1 -6.2 63 63 A E S S+ 0 0 127 1,-0.2 -1,-0.6 -5,-0.1 3,-0.1 -0.254 79.0 32.5 -80.9 172.1 1.8 -11.4 -7.4 64 64 A T S S+ 0 0 135 1,-0.2 2,-0.2 -3,-0.1 -1,-0.2 0.885 97.2 123.9 46.8 45.6 -1.7 -11.8 -8.6 65 65 A A S S- 0 0 51 -3,-0.3 -1,-0.2 2,-0.1 -6,-0.0 -0.720 79.9 -96.1-126.3 176.8 -1.7 -8.3 -10.0 66 66 A S S S+ 0 0 132 -2,-0.2 2,-0.5 1,-0.1 -1,-0.1 0.931 112.5 44.4 -59.3 -48.0 -2.3 -6.5 -13.3 67 67 A E S S- 0 0 162 -5,-0.1 2,-0.2 -4,-0.1 -2,-0.1 -0.866 76.1-171.5-104.3 130.7 1.5 -6.5 -14.1 68 68 A G - 0 0 76 -2,-0.5 2,-0.3 -4,-0.1 -5,-0.1 -0.483 19.7-110.3-110.4-177.5 3.6 -9.6 -13.6 69 69 A T - 0 0 102 -2,-0.2 2,-0.4 2,-0.0 -7,-0.0 -0.898 18.8-153.2-118.2 146.8 7.3 -10.4 -13.7 70 70 A E - 0 0 128 -2,-0.3 2,-0.5 2,-0.0 9,-0.1 -0.972 7.0-170.9-122.6 130.1 9.2 -12.6 -16.2 71 71 A A > - 0 0 53 -2,-0.4 3,-0.9 6,-0.1 2,-0.3 -0.954 15.5-143.3-124.0 114.2 12.4 -14.4 -15.4 72 72 A K G > S+ 0 0 158 -2,-0.5 3,-1.1 1,-0.3 -2,-0.0 -0.550 85.3 4.7 -76.1 134.6 14.4 -16.1 -18.3 73 73 A K G 3 S- 0 0 172 -2,-0.3 -1,-0.3 1,-0.3 3,-0.1 0.901 121.0 -77.4 59.7 42.9 16.0 -19.4 -17.4 74 74 A R G < S+ 0 0 240 -3,-0.9 -1,-0.3 1,-0.1 -2,-0.2 0.812 88.5 164.0 35.4 40.1 14.4 -19.4 -14.0 75 75 A K < - 0 0 134 -3,-1.1 2,-0.2 1,-0.1 -1,-0.1 -0.306 38.9-101.4 -81.0 168.4 17.1 -16.9 -13.1 76 76 A S + 0 0 112 -3,-0.1 -1,-0.1 -2,-0.1 4,-0.1 -0.579 50.8 142.4 -91.1 154.2 17.1 -14.6 -10.0 77 77 A G - 0 0 45 2,-0.5 4,-0.2 -2,-0.2 -6,-0.1 -0.815 65.5 -48.6-161.4-158.7 16.2 -11.0 -10.1 78 78 A P S S+ 0 0 140 0, 0.0 2,-0.5 0, 0.0 -2,-0.0 0.506 116.6 71.2 -69.8 -3.1 14.5 -8.1 -8.3 79 79 A S S S- 0 0 51 -9,-0.1 -2,-0.5 2,-0.0 2,-0.1 -0.968 99.1-105.6-121.4 124.2 11.5 -10.4 -7.8 80 80 A S 0 0 141 -2,-0.5 -4,-0.0 -4,-0.1 0, 0.0 -0.211 360.0 360.0 -47.1 107.4 11.5 -13.3 -5.4 81 81 A G 0 0 104 -4,-0.2 -1,-0.1 -2,-0.1 -2,-0.0 -0.864 360.0 360.0-117.3 360.0 11.8 -16.3 -7.8