==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 02-DEC-05 2D8C . COMPND 2 MOLECULE: PHOSPHATIDYLCHOLINE:CERAMIDE . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR A.K.GORONCY,T.KIGAWA,S.KOSHIBA,T.TOMIZAWA,N.KOBAYASHI, . 97 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7465.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 48 49.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 15 15.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 25 25.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 138 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 151.1 2.1 0.0 -1.2 2 2 A S + 0 0 127 1,-0.1 2,-1.2 2,-0.0 0, 0.0 0.667 360.0 44.0-122.0 -58.8 0.9 0.9 -4.8 3 3 A S + 0 0 98 1,-0.2 3,-0.2 3,-0.0 -1,-0.1 -0.668 65.5 150.9 -96.2 80.7 3.6 0.1 -7.3 4 4 A G S S+ 0 0 78 -2,-1.2 2,-0.5 1,-0.3 -1,-0.2 0.995 71.4 5.1 -72.4 -70.5 4.8 -3.3 -6.2 5 5 A S S S- 0 0 114 0, 0.0 -1,-0.3 0, 0.0 0, 0.0 -0.918 80.1-131.0-124.0 105.9 6.0 -5.1 -9.3 6 6 A S - 0 0 63 -2,-0.5 3,-0.1 -3,-0.2 -3,-0.0 -0.081 11.3-137.1 -49.8 149.7 6.0 -3.0 -12.5 7 7 A G S S+ 0 0 89 1,-0.2 2,-0.4 0, 0.0 -1,-0.1 0.977 84.5 27.7 -75.7 -59.9 4.4 -4.7 -15.5 8 8 A M - 0 0 171 2,-0.0 2,-0.4 0, 0.0 -1,-0.2 -0.898 61.6-179.5-109.7 133.6 6.8 -3.8 -18.3 9 9 A L + 0 0 105 -2,-0.4 2,-0.3 -3,-0.1 -3,-0.0 -0.791 41.1 85.7-134.5 91.7 10.5 -3.2 -17.7 10 10 A S - 0 0 104 -2,-0.4 2,-0.4 0, 0.0 -2,-0.0 -0.977 56.8-124.9-172.6 168.2 12.6 -2.4 -20.8 11 11 A A - 0 0 46 -2,-0.3 3,-0.1 1,-0.2 -2,-0.0 -0.993 9.5-144.4-132.6 135.8 13.7 0.4 -23.1 12 12 A R S S- 0 0 239 -2,-0.4 2,-0.3 1,-0.2 -1,-0.2 0.988 79.2 -22.4 -57.6 -65.8 13.4 0.7 -26.9 13 13 A T - 0 0 58 1,-0.0 -1,-0.2 2,-0.0 4,-0.2 -0.996 41.3-174.4-150.8 149.6 16.7 2.4 -27.6 14 14 A M + 0 0 39 -2,-0.3 70,-0.3 -3,-0.1 69,-0.2 0.073 57.0 110.1-130.9 21.2 19.3 4.5 -25.7 15 15 A K S S+ 0 0 98 68,-0.1 70,-0.2 1,-0.1 -1,-0.1 0.783 99.0 18.5 -67.8 -27.2 21.6 5.3 -28.6 16 16 A E + 0 0 70 68,-0.1 -1,-0.1 67,-0.1 -2,-0.1 0.790 68.6 167.8-108.1 -52.1 20.4 8.9 -28.4 17 17 A V + 0 0 0 -4,-0.2 33,-0.4 1,-0.2 32,-0.2 0.742 63.9 88.0 39.5 25.8 18.9 9.3 -25.0 18 18 A V S S+ 0 0 5 28,-0.2 29,-1.6 29,-0.1 30,-0.2 0.694 80.8 45.7-116.1 -39.9 19.0 13.0 -25.8 19 19 A Y S S+ 0 0 165 27,-0.2 -2,-0.1 28,-0.1 0, 0.0 0.386 88.4 127.1 -86.6 3.4 15.8 13.7 -27.7 20 20 A W - 0 0 25 1,-0.1 27,-0.2 2,-0.1 0, 0.0 0.114 62.0-103.5 -51.5 174.2 13.9 11.7 -25.0 21 21 A S > - 0 0 59 24,-0.1 4,-2.0 25,-0.1 3,-0.3 -0.589 20.8-112.0-103.1 166.1 10.9 13.3 -23.2 22 22 A P T 4 S+ 0 0 52 0, 0.0 22,-0.3 0, 0.0 4,-0.3 0.640 119.9 49.1 -69.8 -14.2 10.6 14.8 -19.7 23 23 A K T > S+ 0 0 147 2,-0.1 4,-1.2 20,-0.1 22,-0.1 0.683 109.7 50.4 -96.6 -23.7 8.3 11.8 -18.8 24 24 A K H > S+ 0 0 63 -3,-0.3 4,-2.1 2,-0.2 5,-0.3 0.947 96.9 64.2 -78.6 -53.3 10.7 9.2 -20.1 25 25 A V H X S+ 0 0 0 -4,-2.0 4,-0.9 19,-0.3 -1,-0.2 0.814 106.2 49.8 -39.1 -37.6 13.9 10.3 -18.4 26 26 A A H >> S+ 0 0 15 -4,-0.3 3,-1.9 2,-0.2 4,-1.5 0.979 103.3 54.7 -68.3 -58.6 12.1 9.4 -15.2 27 27 A D H 3X S+ 0 0 108 -4,-1.2 4,-1.6 1,-0.3 -2,-0.2 0.823 105.7 57.0 -44.3 -35.8 10.8 6.0 -16.1 28 28 A W H 3X S+ 0 0 12 -4,-2.1 4,-0.6 2,-0.2 -1,-0.3 0.850 104.8 52.0 -66.2 -35.0 14.5 5.2 -16.8 29 29 A L H X<>S+ 0 0 0 -3,-1.9 3,-2.3 -4,-0.9 5,-1.3 0.990 111.2 42.4 -65.0 -62.7 15.4 6.2 -13.3 30 30 A L H ><5S+ 0 0 74 -4,-1.5 3,-2.0 1,-0.3 -1,-0.2 0.822 102.9 71.4 -54.0 -32.3 13.0 4.0 -11.4 31 31 A E H 3<5S+ 0 0 67 -4,-1.6 -1,-0.3 -5,-0.4 -2,-0.2 0.796 110.3 31.5 -55.1 -28.8 13.8 1.2 -13.9 32 32 A N T <<5S- 0 0 66 -3,-2.3 -1,-0.3 -4,-0.6 -2,-0.2 0.178 126.9 -97.1-113.7 13.8 17.2 1.0 -12.1 33 33 A A T < 5S+ 0 0 69 -3,-2.0 -3,-0.3 -4,-0.2 3,-0.1 0.942 82.6 132.9 70.6 49.5 15.8 2.0 -8.7 34 34 A M > < + 0 0 2 -5,-1.3 3,-1.3 -8,-0.2 4,-0.5 -0.313 8.7 137.5-125.7 48.5 16.8 5.7 -8.9 35 35 A P T 3> + 0 0 77 0, 0.0 4,-0.6 0, 0.0 -1,-0.1 0.575 65.4 71.2 -69.8 -8.9 13.6 7.4 -7.7 36 36 A E T 34 S+ 0 0 72 1,-0.2 3,-0.1 2,-0.2 -2,-0.1 0.744 99.4 45.0 -78.7 -24.8 15.7 9.8 -5.7 37 37 A Y T <> S+ 0 0 0 -3,-1.3 4,-2.0 1,-0.2 -1,-0.2 0.550 93.1 82.4 -93.7 -10.8 16.9 11.5 -8.9 38 38 A C T 4 S+ 0 0 34 -4,-0.5 6,-0.2 2,-0.2 4,-0.2 0.897 86.7 56.4 -59.9 -42.1 13.4 11.6 -10.4 39 39 A E T >< S+ 0 0 144 -4,-0.6 3,-1.2 1,-0.2 4,-0.3 0.967 116.1 33.8 -53.7 -59.6 12.6 14.8 -8.3 40 40 A P T 34 S+ 0 0 14 0, 0.0 -1,-0.2 0, 0.0 3,-0.2 0.729 124.9 46.2 -69.7 -22.6 15.6 16.8 -9.7 41 41 A L T >< S+ 0 0 0 -4,-2.0 3,-1.3 1,-0.2 -2,-0.2 0.195 80.6 106.8-104.2 13.8 15.2 15.0 -13.1 42 42 A E T < S+ 0 0 102 -3,-1.2 -16,-0.2 1,-0.3 -1,-0.2 0.935 94.3 26.5 -56.8 -49.5 11.4 15.5 -13.2 43 43 A H T 3 S+ 0 0 147 -4,-0.3 2,-0.3 -3,-0.2 -1,-0.3 -0.020 101.6 120.5-103.7 28.3 11.7 18.1 -15.9 44 44 A F < - 0 0 35 -3,-1.3 2,-0.4 -22,-0.3 -19,-0.3 -0.675 52.0-143.5 -94.9 148.4 15.0 16.8 -17.3 45 45 A T >> - 0 0 44 -2,-0.3 4,-3.0 -20,-0.1 3,-1.0 -0.870 30.3-106.7-113.1 144.9 15.4 15.6 -20.8 46 46 A G H 3> S+ 0 0 0 -2,-0.4 4,-2.0 1,-0.3 -27,-0.2 0.788 124.5 51.4 -32.9 -39.4 17.5 12.7 -22.1 47 47 A Q H 3> S+ 0 0 66 -29,-1.6 4,-1.2 -27,-0.2 -1,-0.3 0.939 113.3 41.4 -67.6 -48.7 19.9 15.4 -23.4 48 48 A D H <4 S+ 0 0 82 -3,-1.0 -2,-0.2 -30,-0.2 -1,-0.2 0.855 112.9 56.0 -67.3 -35.8 20.1 17.2 -20.0 49 49 A L H >< S+ 0 0 0 -4,-3.0 3,-1.1 1,-0.2 -1,-0.2 0.922 109.5 44.4 -62.6 -45.7 20.3 13.9 -18.1 50 50 A I H 3< S+ 0 0 5 -4,-2.0 -1,-0.2 -33,-0.4 -2,-0.2 0.745 103.4 66.9 -70.7 -23.4 23.3 12.8 -20.1 51 51 A N T 3< S+ 0 0 87 -4,-1.2 2,-0.4 -5,-0.1 -1,-0.3 0.165 78.9 118.9 -83.2 19.7 24.9 16.2 -19.7 52 52 A L < - 0 0 6 -3,-1.1 2,-0.3 22,-0.0 -3,-0.0 -0.707 40.6-179.9 -90.6 137.4 25.1 15.5 -16.0 53 53 A T >> - 0 0 59 -2,-0.4 3,-2.0 1,-0.1 4,-0.9 -0.951 45.9-103.9-135.8 155.3 28.6 15.5 -14.3 54 54 A Q H >> S+ 0 0 103 -2,-0.3 4,-0.8 1,-0.3 3,-0.6 0.791 123.4 59.1 -45.0 -30.7 29.9 15.0 -10.8 55 55 A E H >> S+ 0 0 127 1,-0.2 3,-0.6 2,-0.2 4,-0.5 0.861 95.5 60.0 -68.6 -36.4 30.3 18.8 -10.7 56 56 A D H <4 S+ 0 0 50 -3,-2.0 3,-0.4 1,-0.2 -1,-0.2 0.703 98.2 62.0 -64.5 -18.8 26.6 19.2 -11.3 57 57 A F H << S+ 0 0 14 -4,-0.9 7,-0.4 -3,-0.6 -1,-0.2 0.872 88.3 66.7 -74.7 -38.7 26.1 17.3 -8.1 58 58 A K H << S+ 0 0 151 -4,-0.8 -1,-0.2 -3,-0.6 -2,-0.2 0.753 111.7 38.4 -53.9 -23.8 27.9 19.9 -6.0 59 59 A K S < S- 0 0 103 -4,-0.5 3,-0.1 -3,-0.4 5,-0.0 -0.846 95.8 -45.2-127.1 163.8 25.0 22.2 -6.9 60 60 A P S S+ 0 0 103 0, 0.0 -1,-0.1 0, 0.0 2,-0.1 -0.158 103.4 28.7 -69.7 166.6 21.2 21.9 -7.3 61 61 A P S S+ 0 0 75 0, 0.0 2,-1.1 0, 0.0 -20,-0.1 -0.892 128.7 45.3 -69.8 -29.2 18.9 20.5 -8.3 62 62 A L S S+ 0 0 2 -6,-0.2 2,-0.4 -22,-0.2 -3,-0.3 -0.589 79.7 143.9 -74.4 99.8 21.1 17.4 -8.0 63 63 A Y S S- 0 0 132 -2,-1.1 -5,-0.1 -5,-0.1 -6,-0.1 -0.981 73.0 -29.1-144.0 128.3 22.8 17.9 -4.5 64 64 A R S S+ 0 0 198 -7,-0.4 -6,-0.1 -2,-0.4 -2,-0.0 0.816 81.7 149.7 33.5 43.3 23.7 15.2 -1.9 65 65 A V + 0 0 41 -8,-0.1 2,-0.3 1,-0.0 -1,-0.2 0.777 64.6 20.7 -72.5 -27.0 20.8 13.2 -3.4 66 66 A S S > S- 0 0 26 -29,-0.0 3,-0.5 -30,-0.0 4,-0.1 -0.896 76.2-117.5-138.0 166.5 22.5 10.0 -2.5 67 67 A S T 3 S+ 0 0 130 -2,-0.3 -2,-0.0 1,-0.2 -3,-0.0 0.131 102.2 77.7 -90.8 20.2 25.2 8.7 -0.1 68 68 A D T > S- 0 0 63 0, 0.0 3,-2.0 0, 0.0 -1,-0.2 -0.068 108.5-111.5-117.7 30.7 27.3 7.7 -3.2 69 69 A N T < S- 0 0 97 -3,-0.5 -2,-0.1 1,-0.3 -12,-0.1 0.830 76.9 -59.1 42.0 38.1 28.6 11.2 -4.1 70 70 A G T 3> S+ 0 0 2 -4,-0.1 4,-1.0 -13,-0.1 -1,-0.3 0.873 108.5 128.5 61.9 37.9 26.5 10.9 -7.1 71 71 A Q H <> + 0 0 85 -3,-2.0 4,-2.8 2,-0.2 5,-0.3 0.923 62.3 54.2 -87.3 -54.7 28.3 7.7 -8.3 72 72 A R H > S+ 0 0 141 2,-0.2 4,-2.1 1,-0.2 5,-0.1 0.911 117.3 39.0 -45.1 -52.6 25.5 5.3 -8.9 73 73 A L H > S+ 0 0 0 2,-0.2 4,-2.6 1,-0.2 5,-0.3 0.986 111.6 54.8 -63.5 -61.1 23.8 7.8 -11.2 74 74 A L H X S+ 0 0 28 -4,-1.0 4,-2.9 1,-0.3 -1,-0.2 0.838 113.3 46.0 -41.1 -40.4 27.0 9.1 -12.9 75 75 A D H X S+ 0 0 93 -4,-2.8 4,-1.1 2,-0.2 -1,-0.3 0.904 109.8 52.0 -71.7 -43.0 27.7 5.5 -13.7 76 76 A M H < S+ 0 0 46 -4,-2.1 4,-0.4 -3,-0.3 -2,-0.2 0.797 118.3 39.5 -63.8 -28.5 24.2 4.7 -14.9 77 77 A I H >X S+ 0 0 1 -4,-2.6 3,-1.5 2,-0.2 4,-1.2 0.880 99.7 70.7 -87.3 -44.6 24.4 7.8 -17.2 78 78 A E H 3X S+ 0 0 114 -4,-2.9 4,-2.1 -5,-0.3 3,-0.4 0.818 102.4 49.1 -40.8 -36.8 28.0 7.3 -18.3 79 79 A T H 3X S+ 0 0 46 -4,-1.1 4,-1.1 1,-0.2 -1,-0.3 0.832 99.4 64.3 -74.5 -33.5 26.7 4.3 -20.3 80 80 A L H <> S+ 0 0 0 -3,-1.5 4,-0.6 -4,-0.4 -1,-0.2 0.722 112.0 38.2 -62.4 -20.4 23.9 6.4 -21.8 81 81 A K H >< S+ 0 0 48 -4,-1.2 3,-0.6 -3,-0.4 5,-0.2 0.889 99.2 69.0 -94.5 -55.4 26.6 8.4 -23.5 82 82 A M H 3< S+ 0 0 128 -4,-2.1 4,-0.2 1,-0.3 -2,-0.2 0.771 104.3 51.8 -34.1 -33.3 29.2 5.8 -24.5 83 83 A E H 3< S+ 0 0 62 -4,-1.1 -1,-0.3 -69,-0.2 -2,-0.2 0.960 97.1 75.4 -72.2 -54.0 26.5 4.7 -26.9 84 84 A H S << S- 0 0 45 -4,-0.6 2,-1.8 -3,-0.6 -68,-0.1 -0.073 101.8 -95.3 -55.6 160.1 25.8 8.1 -28.5 85 85 A H + 0 0 171 -70,-0.2 2,-0.6 1,-0.1 -1,-0.1 -0.576 66.4 147.9 -82.4 80.9 28.3 9.5 -31.0 86 86 A M - 0 0 84 -2,-1.8 2,-0.9 -5,-0.2 -1,-0.1 -0.797 37.6-151.9-119.9 88.4 30.4 11.6 -28.6 87 87 A E - 0 0 195 -2,-0.6 2,-0.1 1,-0.0 -2,-0.1 -0.429 20.5-158.7 -61.9 100.9 34.0 11.8 -29.8 88 88 A A - 0 0 80 -2,-0.9 -1,-0.0 1,-0.1 -2,-0.0 -0.469 24.4 -90.1 -82.5 155.0 35.8 12.4 -26.5 89 89 A H - 0 0 178 -2,-0.1 -1,-0.1 1,-0.1 3,-0.0 0.043 28.7-157.2 -54.6 170.6 39.3 13.9 -26.2 90 90 A K + 0 0 168 2,-0.0 -1,-0.1 0, 0.0 -2,-0.0 0.710 58.0 96.9-117.8 -55.8 42.3 11.6 -26.3 91 91 A N - 0 0 135 1,-0.1 2,-0.5 2,-0.0 -2,-0.0 -0.008 59.6-152.6 -39.7 139.9 45.2 13.4 -24.6 92 92 A S + 0 0 113 1,-0.1 -1,-0.1 2,-0.0 -2,-0.0 -0.961 56.9 59.3-127.7 115.7 45.6 12.5 -21.0 93 93 A G - 0 0 57 -2,-0.5 -1,-0.1 0, 0.0 -2,-0.0 0.402 62.3-144.8 130.8 88.2 47.2 14.8 -18.4 94 94 A P - 0 0 116 0, 0.0 3,-0.1 0, 0.0 -2,-0.0 -0.183 16.2-127.4 -69.8 165.3 45.8 18.3 -17.6 95 95 A S S S+ 0 0 135 1,-0.2 2,-0.3 2,-0.0 0, 0.0 0.934 89.2 16.5 -79.5 -50.8 47.9 21.3 -16.8 96 96 A S 0 0 110 1,-0.1 -1,-0.2 0, 0.0 0, 0.0 -0.939 360.0 360.0-126.8 148.6 46.2 22.3 -13.5 97 97 A G 0 0 129 -2,-0.3 -1,-0.1 -3,-0.1 -2,-0.0 0.192 360.0 360.0-168.0 360.0 43.9 20.4 -11.2