==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN, CELL CYCLE 08-DEC-05 2D8X . COMPND 2 MOLECULE: PROTEIN PINCH; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR X.R.QIN,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL . 70 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5220.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 30 42.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 17.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 130 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -98.3 -29.1 -9.3 1.1 2 2 A S - 0 0 129 0, 0.0 2,-0.5 0, 0.0 3,-0.1 -0.980 360.0-137.7-151.4 160.0 -26.1 -7.1 0.5 3 3 A S - 0 0 117 -2,-0.3 0, 0.0 1,-0.2 0, 0.0 -0.972 67.5 -11.5-127.8 119.0 -25.1 -3.4 0.8 4 4 A G - 0 0 52 -2,-0.5 -1,-0.2 2,-0.1 3,-0.2 0.266 57.5-126.0 76.1 153.7 -23.0 -1.6 -1.8 5 5 A S S S+ 0 0 122 1,-0.2 2,-0.5 -3,-0.1 -1,-0.1 0.842 93.5 19.3-100.2 -50.9 -21.2 -3.1 -4.8 6 6 A S S S+ 0 0 46 9,-0.2 9,-1.0 19,-0.1 2,-0.3 -0.894 74.4 170.2-128.6 102.2 -17.6 -1.8 -4.4 7 7 A G B -A 14 0A 33 -2,-0.5 19,-0.4 7,-0.2 7,-0.2 -0.840 38.5 -99.2-113.8 150.6 -16.6 -0.5 -1.0 8 8 A C - 0 0 5 5,-1.8 19,-0.3 -2,-0.3 -1,-0.0 -0.331 22.1-159.2 -64.4 143.7 -13.2 0.4 0.4 9 9 A H S S+ 0 0 128 17,-1.2 -1,-0.1 2,-0.1 18,-0.1 0.819 82.9 64.0 -92.0 -37.8 -11.4 -2.2 2.5 10 10 A Q S S+ 0 0 104 16,-0.2 17,-0.1 1,-0.1 -1,-0.0 0.969 130.4 0.3 -48.8 -72.6 -9.0 0.1 4.3 11 11 A C S S- 0 0 74 2,-0.1 -1,-0.1 1,-0.0 -2,-0.1 0.870 94.4-129.3 -87.0 -43.0 -11.6 2.1 6.2 12 12 A G + 0 0 43 1,-0.4 3,-0.1 0, 0.0 -4,-0.1 -0.132 60.0 132.3 119.9 -37.5 -14.7 0.4 4.9 13 13 A E - 0 0 144 -6,-0.1 -5,-1.8 1,-0.1 -1,-0.4 -0.011 67.3 -94.6 -45.6 152.1 -16.8 3.3 3.8 14 14 A F B -A 7 0A 99 -7,-0.2 2,-0.4 -3,-0.1 -7,-0.2 -0.517 36.5-123.4 -75.5 138.4 -18.3 3.1 0.4 15 15 A I - 0 0 8 -9,-1.0 2,-0.5 -2,-0.2 -9,-0.2 -0.695 27.2-173.3 -86.0 129.3 -16.4 4.6 -2.5 16 16 A I - 0 0 153 -2,-0.4 2,-0.6 2,-0.2 -9,-0.0 -0.948 64.5 -6.2-127.8 112.4 -18.2 7.2 -4.6 17 17 A G S S+ 0 0 85 -2,-0.5 2,-0.5 2,-0.0 -2,-0.1 -0.628 125.6 42.8 111.8 -73.7 -16.6 8.6 -7.7 18 18 A R - 0 0 133 -2,-0.6 2,-0.6 2,-0.0 -2,-0.2 -0.947 63.6-170.4-115.7 121.2 -13.1 7.2 -7.8 19 19 A V - 0 0 53 -2,-0.5 2,-0.9 9,-0.1 9,-0.2 -0.934 11.6-151.4-114.6 114.8 -12.5 3.6 -7.0 20 20 A I E -B 27 0B 10 7,-2.7 7,-1.2 -2,-0.6 2,-0.6 -0.735 12.5-152.8 -87.3 105.4 -8.9 2.4 -6.6 21 21 A K E +B 26 0B 128 -2,-0.9 2,-0.3 5,-0.2 5,-0.2 -0.678 35.5 137.0 -81.6 119.3 -8.7 -1.3 -7.6 22 22 A A E > +B 25 0B 5 3,-3.3 3,-2.0 -2,-0.6 31,-0.0 -0.982 55.2 18.0-156.6 162.5 -5.9 -3.1 -5.8 23 23 A M T 3 S- 0 0 45 -2,-0.3 3,-0.1 1,-0.3 -1,-0.1 0.788 130.2 -62.2 41.7 31.5 -5.0 -6.3 -4.0 24 24 A N T 3 S+ 0 0 158 1,-0.2 -1,-0.3 0, 0.0 2,-0.3 0.905 122.1 84.9 63.6 42.9 -8.1 -7.6 -5.7 25 25 A N E < S-B 22 0B 76 -3,-2.0 -3,-3.3 -5,-0.1 2,-0.3 -0.982 79.9 -98.8-165.5 160.7 -10.4 -5.1 -3.9 26 26 A S E +B 21 0B 7 -19,-0.4 -17,-1.2 -2,-0.3 2,-0.3 -0.645 42.9 166.6 -89.7 144.6 -11.7 -1.6 -4.1 27 27 A W E -B 20 0B 14 -7,-1.2 -7,-2.7 -2,-0.3 -19,-0.1 -0.910 34.7 -91.4-147.5 173.1 -10.1 1.3 -2.0 28 28 A H > - 0 0 30 -2,-0.3 4,-1.7 -9,-0.2 -9,-0.1 -0.529 32.7-116.8 -90.0 157.4 -10.1 5.0 -1.7 29 29 A P T 4 S+ 0 0 51 0, 0.0 13,-0.2 0, 0.0 14,-0.2 0.492 119.4 34.5 -69.8 -2.0 -7.6 7.4 -3.4 30 30 A E T 4 S+ 0 0 142 11,-0.1 10,-0.0 10,-0.1 12,-0.0 0.544 113.6 56.8-123.7 -22.4 -6.3 8.3 0.0 31 31 A C T 4 S+ 0 0 19 1,-0.1 2,-1.7 9,-0.1 -4,-0.0 0.965 86.4 77.1 -76.1 -56.9 -6.7 5.0 1.9 32 32 A F S < S+ 0 0 0 -4,-1.7 9,-2.9 8,-0.1 2,-0.3 -0.345 71.4 150.2 -58.8 86.4 -4.6 2.8 -0.4 33 33 A R B -C 40 0C 103 -2,-1.7 7,-0.2 7,-0.3 20,-0.2 -0.763 50.3 -80.1-119.7 166.2 -1.2 4.1 0.9 34 34 A C - 0 0 0 5,-0.7 20,-0.2 -2,-0.3 -1,-0.2 -0.054 28.2-134.8 -58.1 165.0 2.3 2.5 1.3 35 35 A D S S+ 0 0 66 18,-0.6 19,-0.1 2,-0.1 -1,-0.1 0.365 103.4 33.2-103.6 1.4 3.1 0.3 4.2 36 36 A L S S+ 0 0 85 17,-0.2 18,-0.1 3,-0.1 -1,-0.0 0.606 140.0 13.2-124.1 -33.4 6.4 2.0 4.9 37 37 A C S S- 0 0 60 2,-0.1 -2,-0.1 0, 0.0 17,-0.1 0.396 91.4-129.4-124.0 -5.6 5.8 5.6 4.0 38 38 A Q + 0 0 96 1,-0.2 2,-0.5 -5,-0.1 -3,-0.1 0.931 46.2 168.0 53.5 50.6 2.0 5.6 3.7 39 39 A E - 0 0 87 1,-0.1 -5,-0.7 2,-0.0 -1,-0.2 -0.837 46.2 -99.8-100.4 129.8 2.1 7.2 0.3 40 40 A V B -C 33 0C 52 -2,-0.5 4,-0.4 -7,-0.2 -7,-0.3 -0.213 35.1-169.4 -47.6 114.5 -1.0 7.3 -1.9 41 41 A L + 0 0 2 -9,-2.9 -1,-0.2 1,-0.2 -8,-0.1 -0.313 57.0 99.6-105.1 48.2 -0.6 4.4 -4.3 42 42 A A S S+ 0 0 18 -13,-0.2 -1,-0.2 -2,-0.1 4,-0.1 0.871 98.8 9.6 -96.1 -52.1 -3.5 5.4 -6.6 43 43 A D S S+ 0 0 136 -3,-0.2 -2,-0.1 -14,-0.2 3,-0.1 0.855 131.0 50.8 -95.4 -47.1 -1.8 7.1 -9.5 44 44 A I S S- 0 0 101 -4,-0.4 12,-0.1 1,-0.2 -3,-0.1 0.777 109.5-132.3 -62.5 -26.4 1.8 6.4 -8.8 45 45 A G - 0 0 28 -5,-0.1 2,-0.3 10,-0.1 11,-0.2 -0.198 13.6-107.9 96.2 169.5 0.9 2.8 -8.5 46 46 A F - 0 0 70 9,-0.1 2,-0.4 -4,-0.1 9,-0.2 -0.845 11.2-135.4-133.6 169.9 1.7 0.1 -5.9 47 47 A V E -D 54 0D 31 7,-2.7 7,-1.4 -2,-0.3 2,-0.4 -0.938 18.1-135.3-134.5 111.9 3.9 -3.0 -5.6 48 48 A K E +D 53 0D 112 -2,-0.4 2,-0.3 5,-0.2 5,-0.2 -0.489 40.1 155.6 -67.0 120.7 2.6 -6.3 -4.0 49 49 A N E > -D 52 0D 59 3,-1.9 3,-2.1 -2,-0.4 -2,-0.1 -0.966 64.0 -12.3-152.1 131.7 5.2 -7.7 -1.7 50 50 A A T 3 S- 0 0 83 -2,-0.3 3,-0.1 1,-0.3 -2,-0.0 0.807 125.5 -60.1 48.9 31.7 5.0 -10.0 1.4 51 51 A G T 3 S+ 0 0 54 1,-0.2 2,-0.4 0, 0.0 -1,-0.3 0.809 116.3 113.9 68.3 29.7 1.2 -9.4 1.2 52 52 A R E < -D 49 0D 141 -3,-2.1 -3,-1.9 -5,-0.1 2,-0.7 -0.989 68.7-122.2-135.5 143.2 1.7 -5.6 1.7 53 53 A H E +D 48 0D 18 -2,-0.4 -18,-0.6 -5,-0.2 2,-0.3 -0.747 42.9 164.5 -87.4 113.2 1.1 -2.6 -0.5 54 54 A L E -D 47 0D 8 -7,-1.4 -7,-2.7 -2,-0.7 2,-0.3 -0.806 33.8-112.3-124.8 166.4 4.3 -0.6 -1.0 55 55 A C > - 0 0 0 -2,-0.3 4,-1.9 -9,-0.2 5,-0.5 -0.740 33.0-107.9-100.8 148.3 5.5 2.1 -3.4 56 56 A R H > S+ 0 0 166 -2,-0.3 4,-2.8 -11,-0.2 5,-0.3 0.864 119.6 54.7 -34.9 -53.0 8.2 1.6 -6.1 57 57 A P H > S+ 0 0 70 0, 0.0 4,-1.6 0, 0.0 -1,-0.2 0.953 118.2 30.6 -48.0 -65.1 10.5 3.8 -3.9 58 58 A C H >> S+ 0 0 8 2,-0.2 4,-2.4 1,-0.2 3,-1.4 0.993 118.4 53.1 -60.3 -66.4 10.2 1.7 -0.7 59 59 A H H 3X S+ 0 0 25 -4,-1.9 4,-2.9 1,-0.3 5,-0.4 0.845 110.2 51.4 -36.5 -46.7 9.6 -1.7 -2.3 60 60 A N H 3X S+ 0 0 45 -4,-2.8 4,-1.5 -5,-0.5 -1,-0.3 0.890 109.2 49.7 -61.3 -40.7 12.8 -1.0 -4.3 61 61 A R H << S+ 0 0 194 -4,-1.6 -2,-0.2 -3,-1.4 -1,-0.2 0.875 118.1 39.9 -66.3 -38.4 14.7 -0.2 -1.1 62 62 A E H < S+ 0 0 111 -4,-2.4 -2,-0.2 1,-0.2 -3,-0.2 0.984 118.2 43.0 -74.1 -63.7 13.5 -3.4 0.6 63 63 A K H < S+ 0 0 121 -4,-2.9 -3,-0.2 -5,-0.2 -2,-0.2 0.793 85.1 125.0 -53.4 -28.7 13.7 -5.9 -2.3 64 64 A A < - 0 0 57 -4,-1.5 2,-0.2 -5,-0.4 -3,-0.0 -0.071 67.5-126.1 -37.8 109.9 17.1 -4.2 -3.0 65 65 A S - 0 0 116 1,-0.1 -1,-0.1 2,-0.1 4,-0.1 -0.429 37.3 -85.8 -66.7 132.9 19.4 -7.2 -3.0 66 66 A G - 0 0 51 -2,-0.2 -1,-0.1 1,-0.1 -3,-0.0 0.140 33.4-120.5 -34.7 151.1 22.4 -6.7 -0.6 67 67 A P S S+ 0 0 143 0, 0.0 2,-1.1 0, 0.0 -1,-0.1 0.778 99.8 74.4 -69.7 -27.6 25.4 -4.9 -2.1 68 68 A S + 0 0 122 2,-0.1 2,-0.5 0, 0.0 -2,-0.1 -0.752 60.8 155.6 -92.8 96.8 27.6 -7.9 -1.5 69 69 A S 0 0 109 -2,-1.1 -4,-0.0 -4,-0.1 0, 0.0 -0.946 360.0 360.0-127.5 111.7 26.7 -10.5 -4.1 70 70 A G 0 0 129 -2,-0.5 -2,-0.1 0, 0.0 0, 0.0 -0.456 360.0 360.0 -63.6 360.0 29.2 -13.2 -5.1