==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 09-DEC-05 2D9A . COMPND 2 MOLECULE: MYB-RELATED PROTEIN B; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR Y.DOI-KATAYAMA,H.HIROTA,F.HAYASHI,S.YOKOYAMA,RIKEN . 60 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4675.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 32 53.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 38.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 100 0, 0.0 3,-0.1 0, 0.0 4,-0.1 0.000 360.0 360.0 360.0 175.3 -7.4 3.3 -13.2 2 2 A S + 0 0 128 2,-0.2 2,-0.4 1,-0.1 0, 0.0 0.082 360.0 10.8-157.6 -78.3 -8.4 4.1 -16.8 3 3 A S S S+ 0 0 121 0, 0.0 -1,-0.1 0, 0.0 2,-0.1 -0.973 101.5 26.8-124.8 136.7 -5.8 4.1 -19.5 4 4 A G - 0 0 68 -2,-0.4 2,-0.3 1,-0.1 -2,-0.2 -0.254 59.7-130.8 103.9 167.4 -2.2 3.0 -19.2 5 5 A S + 0 0 111 -2,-0.1 2,-0.2 -4,-0.1 -1,-0.1 -0.849 42.7 118.2-162.5 121.2 -0.3 0.5 -17.1 6 6 A S - 0 0 105 -2,-0.3 2,-0.4 2,-0.0 0, 0.0 -0.695 25.0-173.0 175.4 129.4 2.9 0.8 -15.1 7 7 A G - 0 0 51 -2,-0.2 2,-0.1 42,-0.0 38,-0.0 -0.956 9.9-162.0-138.6 116.7 3.9 0.5 -11.5 8 8 A K + 0 0 172 -2,-0.4 -2,-0.0 2,-0.1 0, 0.0 -0.247 54.9 51.8 -86.1 178.1 7.3 1.4 -10.1 9 9 A V S S- 0 0 62 -2,-0.1 2,-0.2 32,-0.0 32,-0.0 0.621 80.3-109.4 63.9 133.3 8.8 0.3 -6.8 10 10 A K - 0 0 154 0, 0.0 2,-0.4 0, 0.0 -2,-0.1 -0.558 28.2-160.3 -92.4 158.6 8.8 -3.4 -5.8 11 11 A W - 0 0 11 -2,-0.2 2,-0.2 4,-0.1 -2,-0.0 -0.998 5.4-169.3-141.6 139.9 6.6 -4.9 -3.1 12 12 A T > - 0 0 75 -2,-0.4 4,-2.2 1,-0.0 5,-0.3 -0.651 47.1 -88.5-120.7 177.5 7.0 -8.1 -1.2 13 13 A H H > S+ 0 0 144 -2,-0.2 4,-1.4 1,-0.2 5,-0.1 0.701 124.9 61.2 -58.7 -18.7 4.8 -10.2 1.1 14 14 A E H > S+ 0 0 125 2,-0.2 4,-3.5 3,-0.2 -1,-0.2 0.995 109.6 32.7 -70.8 -69.0 6.4 -8.1 3.8 15 15 A E H > S+ 0 0 39 2,-0.2 4,-4.3 1,-0.2 5,-0.5 0.956 120.3 52.0 -52.0 -59.0 5.3 -4.6 2.8 16 16 A D H X S+ 0 0 20 -4,-2.2 4,-3.9 1,-0.3 -1,-0.2 0.921 114.5 42.9 -42.6 -59.1 2.0 -5.9 1.4 17 17 A E H X S+ 0 0 110 -4,-1.4 4,-2.9 -5,-0.3 -1,-0.3 0.915 117.2 48.1 -54.7 -47.4 1.3 -7.7 4.7 18 18 A Q H X S+ 0 0 80 -4,-3.5 4,-4.4 2,-0.2 -2,-0.2 0.969 116.0 41.4 -57.7 -58.7 2.5 -4.7 6.6 19 19 A L H X S+ 0 0 0 -4,-4.3 4,-2.8 1,-0.2 -2,-0.2 0.897 113.3 56.4 -56.0 -43.0 0.5 -2.2 4.7 20 20 A R H X S+ 0 0 110 -4,-3.9 4,-1.6 -5,-0.5 -1,-0.2 0.927 116.0 35.2 -54.3 -50.0 -2.4 -4.7 4.8 21 21 A A H X S+ 0 0 47 -4,-2.9 4,-4.0 2,-0.2 -2,-0.2 0.915 113.0 59.1 -70.7 -45.1 -2.3 -4.8 8.6 22 22 A L H X>S+ 0 0 5 -4,-4.4 4,-1.7 -5,-0.2 5,-0.8 0.858 104.8 54.0 -50.9 -38.3 -1.3 -1.1 8.8 23 23 A V H <5S+ 0 0 9 -4,-2.8 4,-0.4 -5,-0.2 3,-0.3 0.990 115.1 35.3 -59.6 -64.7 -4.6 -0.5 7.0 24 24 A R H <5S+ 0 0 224 -4,-1.6 -2,-0.2 1,-0.2 -1,-0.2 0.817 107.2 75.1 -59.2 -31.9 -6.8 -2.4 9.4 25 25 A Q H <5S- 0 0 110 -4,-4.0 -1,-0.2 -5,-0.2 -2,-0.2 0.936 131.5 -22.9 -43.4 -66.1 -4.5 -1.2 12.2 26 26 A F T <5S- 0 0 118 -4,-1.7 -3,-0.2 -3,-0.3 -2,-0.1 0.722 113.9 -67.6-115.5 -48.7 -5.9 2.3 12.2 27 27 A G > < - 0 0 7 -5,-0.8 3,-1.7 -4,-0.4 7,-0.2 -0.383 21.7-124.9 151.8 129.0 -7.4 2.8 8.8 28 28 A Q T 3 S+ 0 0 59 1,-0.3 6,-0.1 -2,-0.1 5,-0.1 0.747 100.1 85.8 -59.6 -23.8 -6.3 3.1 5.2 29 29 A Q T 3 S+ 0 0 149 1,-0.3 2,-1.1 -6,-0.1 -1,-0.3 0.853 85.9 56.2 -44.3 -41.9 -8.1 6.4 5.2 30 30 A D <> + 0 0 89 -3,-1.7 4,-1.6 1,-0.2 -1,-0.3 -0.735 62.9 148.7 -97.8 85.6 -5.0 7.9 6.6 31 31 A W H > + 0 0 8 -2,-1.1 4,-3.3 2,-0.2 5,-0.5 0.930 66.7 64.7 -80.3 -51.6 -2.4 7.0 4.0 32 32 A K H 4 S+ 0 0 175 1,-0.3 4,-0.3 -3,-0.3 -1,-0.2 0.801 112.6 40.0 -39.9 -34.1 -0.2 10.0 4.5 33 33 A F H >> S+ 0 0 89 2,-0.2 3,-1.0 1,-0.1 4,-0.6 0.905 112.8 52.1 -82.8 -47.4 0.3 8.5 7.9 34 34 A L H >X S+ 0 0 1 -4,-1.6 3,-2.6 1,-0.3 4,-0.7 0.940 102.8 59.2 -53.4 -52.6 0.5 4.9 6.9 35 35 A A H >< S+ 0 0 8 -4,-3.3 3,-1.4 1,-0.3 -1,-0.3 0.808 92.1 72.4 -46.4 -32.3 3.2 5.7 4.4 36 36 A S H <4 S+ 0 0 91 -3,-1.0 -1,-0.3 -5,-0.5 -2,-0.2 0.883 88.4 59.0 -50.9 -43.0 5.1 7.0 7.5 37 37 A H H << S+ 0 0 108 -3,-2.6 -1,-0.3 -4,-0.6 -2,-0.2 0.828 104.0 58.9 -55.9 -33.1 5.6 3.4 8.5 38 38 A F << + 0 0 16 -3,-1.4 -1,-0.2 -4,-0.7 8,-0.1 -0.874 60.0 177.9-105.5 104.5 7.4 3.0 5.2 39 39 A P S S+ 0 0 129 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.678 89.6 45.9 -75.0 -18.7 10.4 5.4 4.9 40 40 A N S S+ 0 0 134 -3,-0.1 2,-0.1 -5,-0.1 -2,-0.1 0.762 115.9 50.2 -91.5 -31.6 11.1 3.8 1.5 41 41 A R S S- 0 0 54 -6,-0.2 2,-0.3 -5,-0.0 3,-0.1 -0.187 72.6-150.8 -94.5-170.8 7.5 4.0 0.3 42 42 A T > - 0 0 54 1,-0.1 4,-2.8 -2,-0.1 5,-0.2 -0.903 34.4 -91.0-152.5 177.6 5.0 6.8 0.3 43 43 A D H > S+ 0 0 61 -2,-0.3 4,-3.7 2,-0.2 5,-0.4 0.948 124.4 44.8 -60.6 -51.4 1.3 7.6 0.4 44 44 A Q H > S+ 0 0 109 2,-0.2 4,-4.6 1,-0.2 5,-0.3 0.981 116.2 43.8 -55.8 -64.7 1.0 7.4 -3.3 45 45 A Q H > S+ 0 0 40 2,-0.2 4,-3.4 3,-0.2 5,-0.2 0.876 119.7 46.3 -48.1 -43.7 3.0 4.3 -3.8 46 46 A C H X S+ 0 0 0 -4,-2.8 4,-2.5 2,-0.2 -2,-0.2 0.999 116.9 39.8 -62.3 -70.7 1.1 2.8 -0.8 47 47 A Q H X S+ 0 0 67 -4,-3.7 4,-4.6 1,-0.2 5,-0.3 0.885 121.1 48.0 -44.6 -47.9 -2.4 3.8 -1.8 48 48 A Y H X S+ 0 0 57 -4,-4.6 4,-2.1 -5,-0.4 5,-0.4 0.983 110.7 46.8 -57.8 -64.4 -1.5 3.0 -5.4 49 49 A R H X>S+ 0 0 50 -4,-3.4 4,-2.9 -5,-0.3 5,-1.6 0.773 120.0 45.4 -49.5 -27.8 0.1 -0.4 -4.7 50 50 A W H <5S+ 0 0 29 -4,-2.5 -2,-0.2 3,-0.3 -1,-0.2 0.965 115.3 41.3 -79.5 -61.8 -3.0 -0.9 -2.6 51 51 A L H <5S+ 0 0 99 -4,-4.6 -2,-0.2 1,-0.2 -3,-0.2 0.592 127.0 41.6 -61.9 -8.7 -5.6 0.4 -5.0 52 52 A R H <5S- 0 0 117 -4,-2.1 -2,-0.2 -5,-0.3 -1,-0.2 0.800 142.1 -1.7-103.5 -46.9 -3.5 -1.5 -7.5 53 53 A V T <5S+ 0 0 25 -4,-2.9 2,-2.9 -5,-0.4 7,-0.3 0.780 128.7 57.0-109.0 -62.0 -2.7 -4.7 -5.6 54 54 A L S