==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER APOPTOSIS 09-DEC-05 2D9I . COMPND 2 MOLECULE: NEDD4-BINDING PROTEIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.P.ZHANG,C.KUROSAKI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN . 96 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7084.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 64 66.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 8.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 9.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 30.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 130 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-111.9 -1.2 23.2 -4.3 2 2 A S - 0 0 125 1,-0.1 2,-0.2 0, 0.0 0, 0.0 0.030 360.0-107.5 -54.6 169.1 0.7 22.7 -7.6 3 3 A S - 0 0 121 1,-0.1 2,-0.2 0, 0.0 -1,-0.1 -0.628 29.5-155.4-101.3 161.1 0.8 19.3 -9.3 4 4 A G - 0 0 70 1,-0.3 37,-0.1 -2,-0.2 -1,-0.1 -0.449 41.6 -39.0-120.4-165.8 3.7 16.9 -9.6 5 5 A S - 0 0 72 35,-0.2 -1,-0.3 -2,-0.2 34,-0.0 -0.170 66.9-107.9 -56.5 150.1 4.9 14.1 -11.8 6 6 A S + 0 0 121 -3,-0.1 -1,-0.1 2,-0.0 0, 0.0 -0.078 69.9 87.0 -72.0 177.2 2.2 11.7 -13.1 7 7 A G S S- 0 0 49 2,-0.0 2,-0.2 28,-0.0 25,-0.0 0.292 79.9 -82.1 100.8 132.4 1.8 8.1 -12.0 8 8 A Q + 0 0 151 1,-0.1 3,-0.1 2,-0.0 -2,-0.0 -0.433 39.1 175.1 -67.6 135.0 -0.2 6.7 -9.1 9 9 A N + 0 0 61 -2,-0.2 37,-1.2 1,-0.1 2,-0.5 0.496 60.5 74.8-115.7 -12.6 1.6 6.8 -5.7 10 10 A V E -a 46 0A 76 35,-0.2 2,-0.5 37,-0.1 37,-0.2 -0.913 64.0-159.9-109.0 123.2 -1.2 5.5 -3.5 11 11 A L E -a 47 0A 22 35,-3.0 37,-2.1 -2,-0.5 2,-0.7 -0.891 7.9-147.9-105.3 123.4 -2.0 1.8 -3.6 12 12 A D E +a 48 0A 89 -2,-0.5 37,-0.2 35,-0.2 35,-0.1 -0.796 23.6 168.2 -92.9 113.3 -5.4 0.6 -2.4 13 13 A L > + 0 0 0 35,-2.9 3,-2.2 -2,-0.7 36,-0.2 0.772 45.1 106.7 -91.7 -31.4 -5.3 -2.8 -0.7 14 14 A H T 3 S+ 0 0 95 34,-2.0 36,-0.2 1,-0.2 3,-0.1 -0.269 79.3 33.1 -52.4 122.9 -8.8 -2.7 0.8 15 15 A G T 3 S+ 0 0 81 1,-0.5 -1,-0.2 34,-0.3 2,-0.1 -0.060 99.8 90.9 120.0 -32.5 -11.0 -5.0 -1.2 16 16 A L S < S- 0 0 65 -3,-2.2 -1,-0.5 1,-0.1 2,-0.3 -0.368 83.6 -91.1 -90.3 172.6 -8.5 -7.6 -2.2 17 17 A H > - 0 0 130 -2,-0.1 4,-2.9 1,-0.1 5,-0.4 -0.607 35.6-110.8 -86.2 144.6 -7.6 -10.8 -0.3 18 18 A V H > S+ 0 0 32 42,-0.4 4,-2.6 1,-0.3 5,-0.2 0.861 121.5 49.7 -36.1 -51.8 -4.8 -10.9 2.3 19 19 A D H > S+ 0 0 112 2,-0.2 4,-2.3 1,-0.2 -1,-0.3 0.943 115.9 41.5 -55.7 -52.2 -2.8 -13.0 -0.1 20 20 A E H > S+ 0 0 93 -3,-0.3 4,-3.0 2,-0.2 5,-0.3 0.974 112.7 52.5 -60.7 -57.9 -3.4 -10.7 -3.1 21 21 A A H X S+ 0 0 0 -4,-2.9 4,-2.3 1,-0.2 -1,-0.2 0.887 111.7 49.0 -44.9 -47.3 -2.9 -7.5 -1.1 22 22 A L H X S+ 0 0 32 -4,-2.6 4,-1.5 -5,-0.4 3,-0.4 0.986 110.8 46.3 -58.1 -64.5 0.4 -8.8 0.2 23 23 A E H X S+ 0 0 117 -4,-2.3 4,-2.6 1,-0.3 3,-0.5 0.875 113.1 52.6 -45.9 -43.9 1.8 -9.8 -3.2 24 24 A H H X S+ 0 0 66 -4,-3.0 4,-3.2 1,-0.2 5,-0.4 0.914 102.4 57.4 -60.4 -44.6 0.7 -6.5 -4.6 25 25 A L H X S+ 0 0 1 -4,-2.3 4,-1.0 -3,-0.4 -1,-0.2 0.808 112.2 43.4 -56.8 -30.0 2.5 -4.6 -1.8 26 26 A M H X S+ 0 0 55 -4,-1.5 4,-1.3 -3,-0.5 5,-0.3 0.899 114.1 47.3 -82.1 -45.3 5.7 -6.3 -3.0 27 27 A R H X S+ 0 0 160 -4,-2.6 4,-2.2 1,-0.2 -2,-0.2 0.854 118.0 43.5 -64.5 -35.6 5.1 -5.9 -6.7 28 28 A V H X S+ 0 0 17 -4,-3.2 4,-2.8 -5,-0.2 5,-0.5 0.810 104.9 63.3 -79.1 -31.9 4.2 -2.2 -6.2 29 29 A L H X S+ 0 0 13 -4,-1.0 4,-0.8 -5,-0.4 -2,-0.2 0.842 118.4 27.5 -61.1 -34.0 7.1 -1.7 -3.7 30 30 A E H X S+ 0 0 137 -4,-1.3 4,-1.1 2,-0.2 -2,-0.2 0.805 122.5 50.9 -95.8 -38.3 9.6 -2.5 -6.6 31 31 A K H X S+ 0 0 108 -4,-2.2 4,-0.8 -5,-0.3 -3,-0.2 0.829 116.1 43.6 -68.7 -32.4 7.4 -1.3 -9.5 32 32 A K H >X S+ 0 0 55 -4,-2.8 4,-1.5 2,-0.2 3,-0.5 0.950 108.0 54.7 -77.3 -53.3 6.8 2.0 -7.8 33 33 A T H 3X S+ 0 0 7 -4,-0.8 4,-1.7 -5,-0.5 5,-0.3 0.775 97.7 72.2 -51.5 -27.1 10.3 2.7 -6.6 34 34 A E H >X S+ 0 0 84 -4,-1.1 4,-2.8 1,-0.2 3,-1.0 0.973 102.0 36.8 -53.1 -63.9 11.3 2.3 -10.2 35 35 A E H S+ 0 0 119 -4,-0.8 4,-3.0 -3,-0.5 5,-1.4 0.801 109.5 67.4 -60.4 -29.1 9.8 5.5 -11.5 36 36 A F H 3<>S+ 0 0 51 -4,-1.5 5,-0.7 3,-0.2 -1,-0.3 0.867 113.0 29.6 -59.6 -37.5 10.9 7.1 -8.2 37 37 A K H <<5S+ 0 0 68 -4,-1.7 -2,-0.2 -3,-1.0 -1,-0.2 0.819 121.7 51.5 -90.6 -37.0 14.5 6.7 -9.2 38 38 A Q H <5S+ 0 0 132 -4,-2.8 -3,-0.2 -5,-0.3 -2,-0.2 0.954 135.4 4.2 -64.9 -51.7 14.0 7.0 -12.9 39 39 A N T <5S- 0 0 109 -4,-3.0 -3,-0.2 -5,-0.2 -2,-0.1 0.875 105.7-106.3 -97.8 -68.0 12.0 10.2 -12.8 40 40 A G T < + 0 0 42 -5,-1.4 -35,-0.2 2,-0.1 2,-0.2 0.253 49.0 149.3 132.9 100.5 11.9 11.4 -9.2 41 41 A G < - 0 0 40 -5,-0.7 -32,-0.0 1,-0.1 -8,-0.0 -0.580 52.1 -34.3-134.7-162.6 9.0 11.3 -6.7 42 42 A K - 0 0 103 -2,-0.2 -1,-0.1 1,-0.1 47,-0.1 -0.365 46.7-134.4 -63.7 135.7 8.1 11.0 -3.1 43 43 A P S S+ 0 0 64 0, 0.0 46,-2.6 0, 0.0 2,-0.2 0.458 88.0 60.9 -69.8 0.7 10.5 8.7 -1.1 44 44 A Y E S- B 0 88A 69 44,-0.3 2,-0.3 33,-0.0 44,-0.2 -0.650 71.7-141.8-120.8 178.0 7.4 7.2 0.5 45 45 A L E - B 0 87A 5 42,-1.9 42,-1.5 -2,-0.2 2,-0.2 -0.970 14.6-129.8-148.1 128.8 4.3 5.3 -0.7 46 46 A S E -aB 10 86A 32 -37,-1.2 -35,-3.0 -2,-0.3 2,-0.4 -0.553 25.7-177.8 -78.9 138.9 0.6 5.5 0.4 47 47 A V E -aB 11 85A 1 38,-1.1 38,-0.9 -2,-0.2 2,-0.7 -0.931 12.6-161.1-143.2 115.8 -1.1 2.2 1.2 48 48 A I E +a 12 0A 37 -37,-2.1 -35,-2.9 -2,-0.4 -34,-2.0 -0.855 12.8 173.8-100.6 111.8 -4.7 1.9 2.2 49 49 A T - 0 0 10 -2,-0.7 -34,-0.3 1,-0.3 2,-0.2 0.819 62.0 -66.5 -83.0 -34.0 -5.5 -1.5 3.9 50 50 A G - 0 0 28 33,-0.3 2,-0.3 -36,-0.2 -1,-0.3 -0.562 45.9-161.9 150.3 145.3 -9.1 -0.6 4.8 51 51 A R + 0 0 188 -2,-0.2 2,-1.3 -3,-0.1 32,-0.1 -0.996 69.8 12.9-150.0 148.8 -11.2 1.7 7.0 52 52 A G S > S+ 0 0 26 -2,-0.3 3,-2.3 1,-0.1 4,-0.4 -0.174 95.2 97.1 81.5 -45.3 -14.7 1.9 8.3 53 53 A N G >>>S+ 0 0 93 -2,-1.3 4,-1.9 1,-0.3 3,-1.5 0.884 71.5 67.7 -40.8 -50.6 -15.4 -1.7 7.3 54 54 A H G 345S+ 0 0 134 3,-0.3 -1,-0.3 1,-0.3 5,-0.0 0.842 83.9 75.6 -39.3 -42.7 -14.6 -2.8 10.9 55 55 A S G <45S+ 0 0 93 -3,-2.3 -1,-0.3 1,-0.2 -2,-0.2 0.883 115.4 16.0 -36.4 -58.8 -17.8 -1.0 11.8 56 56 A Q T <45S- 0 0 194 -3,-1.5 -2,-0.2 -4,-0.4 -1,-0.2 0.942 145.6 -47.8 -83.5 -56.2 -19.9 -3.8 10.4 57 57 A G T <5 - 0 0 48 -4,-1.9 -3,-0.3 0, 0.0 -4,-0.1 0.442 53.9-174.5-148.5 -42.9 -17.3 -6.6 10.1 58 58 A G > < + 0 0 26 -5,-0.9 3,-0.6 1,-0.2 -4,-0.2 0.838 22.5 159.3 35.4 48.1 -14.1 -5.3 8.5 59 59 A V T 3 + 0 0 127 1,-0.2 -1,-0.2 -6,-0.1 -5,-0.0 0.195 32.3 116.4 -82.9 17.7 -12.8 -8.9 8.6 60 60 A A T 3 - 0 0 42 1,-0.1 -42,-0.4 -43,-0.1 -1,-0.2 0.930 50.6-169.5 -50.1 -52.8 -10.4 -8.0 5.8 61 61 A R <> + 0 0 178 -3,-0.6 4,-0.6 -44,-0.1 -1,-0.1 0.867 42.5 127.2 61.1 37.3 -7.4 -8.6 8.1 62 62 A I H > + 0 0 3 -13,-0.2 4,-2.5 2,-0.2 3,-0.3 0.893 62.9 54.5 -88.8 -48.4 -5.1 -7.0 5.5 63 63 A K H > S+ 0 0 64 1,-0.2 4,-3.2 2,-0.2 5,-0.3 0.904 102.3 61.4 -51.7 -45.3 -3.3 -4.5 7.6 64 64 A P H > S+ 0 0 67 0, 0.0 4,-1.6 0, 0.0 -1,-0.2 0.915 110.1 38.6 -47.9 -53.1 -2.3 -7.3 10.0 65 65 A A H X S+ 0 0 21 -4,-0.6 4,-2.8 -3,-0.3 5,-0.3 0.947 114.6 53.4 -65.5 -50.5 -0.3 -9.1 7.3 66 66 A V H X S+ 0 0 1 -4,-2.5 4,-2.7 1,-0.2 -1,-0.2 0.915 109.3 49.1 -50.6 -49.1 1.1 -5.9 5.7 67 67 A I H X S+ 0 0 46 -4,-3.2 4,-2.1 1,-0.2 -1,-0.2 0.880 111.3 50.3 -59.6 -39.5 2.4 -4.8 9.1 68 68 A K H X S+ 0 0 159 -4,-1.6 4,-1.5 -5,-0.3 -2,-0.2 0.907 112.3 46.1 -66.0 -43.1 4.0 -8.2 9.7 69 69 A Y H X S+ 0 0 50 -4,-2.8 4,-1.8 2,-0.2 -2,-0.2 0.883 111.9 52.9 -67.2 -39.3 5.7 -8.2 6.3 70 70 A L H ><>S+ 0 0 1 -4,-2.7 5,-2.2 -5,-0.3 3,-0.6 0.989 108.1 46.6 -59.5 -64.5 6.9 -4.6 6.7 71 71 A I H ><5S+ 0 0 107 -4,-2.1 3,-1.9 1,-0.3 -1,-0.2 0.862 107.9 60.8 -46.1 -41.5 8.6 -5.0 10.1 72 72 A S H 3<5S+ 0 0 90 -4,-1.5 -1,-0.3 1,-0.3 -2,-0.2 0.940 110.1 38.3 -52.8 -53.2 10.2 -8.2 8.6 73 73 A H T <<5S- 0 0 93 -4,-1.8 -1,-0.3 -3,-0.6 -2,-0.2 0.236 118.1-114.4 -83.4 14.6 12.0 -6.2 5.9 74 74 A S T < 5 + 0 0 96 -3,-1.9 2,-0.7 -4,-0.2 -3,-0.2 0.899 52.2 176.1 52.9 44.2 12.6 -3.4 8.5 75 75 A F < - 0 0 25 -5,-2.2 2,-0.2 -6,-0.1 -1,-0.2 -0.728 24.2-137.6 -85.8 112.4 10.3 -1.1 6.5 76 76 A R + 0 0 184 -2,-0.7 12,-2.6 12,-0.3 2,-0.3 -0.487 34.6 161.3 -71.1 133.7 9.9 2.2 8.3 77 77 A F E -C 87 0A 62 10,-0.2 2,-0.3 -2,-0.2 10,-0.2 -0.990 24.4-150.5-152.2 155.4 6.3 3.5 8.3 78 78 A S E -C 86 0A 75 8,-2.0 8,-2.2 -2,-0.3 2,-0.8 -0.964 17.1-129.6-131.5 147.5 4.1 6.0 10.2 79 79 A E + 0 0 121 -2,-0.3 6,-0.1 6,-0.2 -2,-0.0 -0.832 38.3 153.4 -99.9 104.1 0.4 6.1 10.9 80 80 A I + 0 0 104 -2,-0.8 -1,-0.2 1,-0.2 5,-0.1 0.738 67.8 34.1 -97.6 -30.3 -1.0 9.5 10.0 81 81 A K S > S- 0 0 106 3,-0.5 3,-1.4 1,-0.0 -1,-0.2 -0.925 78.0-121.3-128.1 152.7 -4.6 8.4 9.3 82 82 A P T 3 S+ 0 0 134 0, 0.0 3,-0.0 0, 0.0 -1,-0.0 0.427 117.7 32.6 -69.8 3.1 -6.9 5.8 10.8 83 83 A G T 3 S+ 0 0 15 -32,-0.1 2,-0.3 -34,-0.0 -33,-0.3 0.119 110.9 70.0-146.4 23.0 -7.1 4.3 7.4 84 84 A C < - 0 0 6 -3,-1.4 -3,-0.5 -36,-0.1 2,-0.4 -0.972 54.5-155.4-142.9 156.2 -3.8 5.0 5.7 85 85 A L E -B 47 0A 3 -38,-0.9 -38,-1.1 -2,-0.3 2,-0.6 -0.961 8.4-151.9-138.8 118.9 -0.2 3.8 6.1 86 86 A K E -BC 46 78A 72 -8,-2.2 -8,-2.0 -2,-0.4 2,-0.4 -0.796 17.8-173.3 -93.2 120.4 2.9 5.8 5.1 87 87 A V E -BC 45 77A 3 -42,-1.5 -42,-1.9 -2,-0.6 2,-0.7 -0.904 21.9-130.2-115.8 142.5 5.9 3.7 4.1 88 88 A M E -B 44 0A 80 -12,-2.6 -12,-0.3 -2,-0.4 -44,-0.3 -0.808 24.8-131.5 -94.2 112.9 9.4 4.8 3.3 89 89 A L - 0 0 19 -46,-2.6 2,-0.3 -2,-0.7 -59,-0.0 -0.412 23.0-122.6 -64.1 129.8 10.7 3.4 0.0 90 90 A K - 0 0 96 -2,-0.2 2,-0.1 -61,-0.1 -1,-0.1 -0.550 24.0-134.4 -76.7 136.1 14.2 1.9 0.4 91 91 A S + 0 0 107 -2,-0.3 -1,-0.1 -54,-0.0 -58,-0.0 -0.407 42.2 121.5 -86.4 165.0 16.9 3.4 -1.9 92 92 A G - 0 0 45 1,-0.2 -1,-0.0 -2,-0.1 0, 0.0 -0.958 54.1 -25.9 174.9-156.9 19.5 1.3 -3.9 93 93 A P - 0 0 119 0, 0.0 2,-0.3 0, 0.0 -1,-0.2 0.106 57.6-117.1 -69.7-171.5 20.9 0.5 -7.3 94 94 A S - 0 0 74 1,-0.1 -60,-0.0 -57,-0.0 0, 0.0 -0.852 24.8-101.4-130.0 165.5 19.0 0.8 -10.6 95 95 A S 0 0 114 -2,-0.3 -1,-0.1 1,-0.2 -61,-0.0 0.939 360.0 360.0 -49.5 -55.8 18.0 -1.6 -13.4 96 96 A G 0 0 116 -3,-0.0 -1,-0.2 0, 0.0 0, 0.0 0.849 360.0 360.0 -80.5 360.0 20.8 -0.5 -15.7