==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 01-DEC-97 1DAX . COMPND 2 MOLECULE: FERREDOXIN I; . SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOVIBRIO AFRICANUS; . AUTHOR S.L.DAVY,M.J.OSBORNE,G.R.MOORE . 64 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4639.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 36 56.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 10.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 9.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 13 20.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 139 0, 0.0 2,-0.5 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-117.1 0.7 -0.8 0.6 2 2 A R + 0 0 185 59,-0.0 61,-0.2 2,-0.0 2,-0.1 -0.899 360.0 161.5-108.6 129.1 2.4 -4.2 1.1 3 3 A K + 0 0 115 59,-2.1 59,-0.4 -2,-0.5 2,-0.3 -0.386 7.9 173.9-123.9-156.2 3.7 -6.1 -1.9 4 4 A F + 0 0 18 57,-0.4 2,-0.3 -2,-0.1 57,-0.3 -0.952 4.7 165.0 165.9 177.1 6.2 -9.0 -2.6 5 5 A Y E -A 60 0A 90 55,-0.9 55,-1.7 -2,-0.3 2,-0.3 -0.965 27.1-107.8 174.4-160.0 7.6 -11.3 -5.2 6 6 A V E -A 59 0A 12 -2,-0.3 53,-0.2 53,-0.3 52,-0.0 -0.943 10.3-132.6-150.6 171.9 10.5 -13.7 -5.9 7 7 A D - 0 0 81 51,-2.4 2,-9.9 -2,-0.3 3,-0.4 -0.229 16.0-153.8-124.7 45.7 13.7 -13.9 -8.0 8 8 A Q S > S+ 0 0 24 26,-0.4 3,-1.3 1,-0.3 26,-0.1 0.649 78.0 104.0 -0.9 -0.1 13.4 -17.4 -9.5 9 9 A D T 3 S+ 0 0 128 -2,-9.9 -1,-0.3 1,-0.3 49,-0.0 0.935 85.0 32.2 -64.1 -43.3 17.1 -16.7 -9.4 10 10 A E T 3 S+ 0 0 110 -3,-0.4 2,-0.6 48,-0.2 48,-0.3 -0.082 93.9 120.5-103.7 35.9 17.6 -19.0 -6.3 11 11 A C < - 0 0 16 -3,-1.3 43,-0.0 -4,-0.3 -5,-0.0 -0.869 42.1-170.2-103.4 119.1 14.8 -21.4 -7.3 12 12 A I - 0 0 115 -2,-0.6 -1,-0.2 21,-0.0 0, 0.0 0.996 55.4 -87.2 -69.8 -64.6 15.8 -25.0 -7.9 13 13 A A S S+ 0 0 66 1,-0.1 2,-0.3 20,-0.0 -2,-0.1 0.343 78.0 133.8 161.9 25.8 12.6 -26.4 -9.4 14 14 A C - 0 0 40 1,-0.1 4,-0.4 20,-0.0 3,-0.4 -0.732 48.2-146.2 -96.5 145.0 10.3 -27.6 -6.6 15 15 A E > + 0 0 117 -2,-0.3 4,-3.2 1,-0.2 5,-0.3 0.281 64.5 119.2 -91.4 13.7 6.6 -26.6 -6.7 16 16 A S H > S+ 0 0 48 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.939 86.0 32.7 -42.4 -59.1 6.5 -26.4 -2.9 17 17 A C H > S+ 0 0 13 -3,-0.4 4,-0.6 1,-0.2 -1,-0.2 0.973 112.5 61.6 -65.1 -52.2 5.5 -22.7 -3.1 18 18 A V H >4 S+ 0 0 23 -4,-0.4 3,-0.9 1,-0.2 -1,-0.2 0.889 108.1 46.9 -41.6 -42.2 3.5 -23.1 -6.3 19 19 A E H 3< S+ 0 0 151 -4,-3.2 -1,-0.2 1,-0.3 -2,-0.2 0.980 108.1 51.5 -67.3 -53.7 1.3 -25.5 -4.3 20 20 A I H 3< S+ 0 0 40 -4,-2.0 30,-0.4 -5,-0.3 -1,-0.3 0.465 134.8 15.8 -63.4 7.8 1.0 -23.1 -1.3 21 21 A A XX + 0 0 0 -3,-0.9 4,-1.6 -4,-0.6 2,-0.9 -0.108 65.9 171.8-178.2 66.2 -0.0 -20.7 -4.0 22 22 A P T 34 S+ 0 0 102 0, 0.0 -3,-0.1 0, 0.0 -4,-0.1 0.021 84.0 49.3 -73.6 32.8 -1.0 -22.2 -7.4 23 23 A G T 34 S+ 0 0 24 -2,-0.9 18,-0.3 -5,-0.1 19,-0.2 0.511 118.1 27.9-139.2 -34.5 -2.1 -18.7 -8.5 24 24 A A T <4 S+ 0 0 0 -3,-0.5 13,-1.8 17,-0.3 14,-1.2 0.828 117.6 52.4-100.6 -44.3 0.6 -16.3 -7.6 25 25 A F E < +B 36 0B 7 -4,-1.6 11,-0.2 11,-0.3 2,-0.2 -0.739 62.0 145.7 -94.9 141.4 3.8 -18.5 -7.8 26 26 A A E -B 35 0B 31 9,-0.5 9,-0.6 -2,-0.4 7,-0.2 -0.655 43.6-124.5-174.6 112.5 4.4 -20.6 -10.9 27 27 A M E -B 34 0B 99 7,-0.3 7,-0.4 -2,-0.2 5,-0.2 -0.258 33.7-162.4 -59.2 148.3 7.7 -21.6 -12.6 28 28 A D - 0 0 60 5,-1.6 5,-0.4 1,-0.1 -1,-0.1 -0.750 31.4-115.8-127.0 177.0 7.9 -20.6 -16.3 29 29 A P S S+ 0 0 93 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.782 118.0 51.5 -83.8 -29.4 10.0 -21.5 -19.3 30 30 A E S S+ 0 0 183 1,-0.2 -3,-0.0 3,-0.1 0, 0.0 0.911 131.7 19.0 -72.9 -38.8 11.4 -18.0 -19.5 31 31 A I S S- 0 0 52 2,-0.2 -1,-0.2 4,-0.0 -3,-0.1 0.155 91.0-152.0-112.2 14.9 12.3 -18.2 -15.9 32 32 A E S S+ 0 0 144 -5,-0.2 2,-0.3 1,-0.1 -5,-0.1 0.733 71.8 79.7 14.9 43.4 12.1 -22.0 -15.9 33 33 A K S S- 0 0 69 -5,-0.4 -5,-1.6 -7,-0.2 2,-0.3 -0.979 96.2 -77.3-160.0 168.9 11.3 -21.4 -12.2 34 34 A A E -B 27 0B 2 -7,-0.4 2,-0.4 -2,-0.3 -26,-0.4 -0.572 48.8-178.7 -76.5 133.5 8.4 -20.3 -9.9 35 35 A Y E -B 26 0B 61 -9,-0.6 2,-2.3 -2,-0.3 -9,-0.5 -0.994 35.1-121.6-135.3 138.5 7.7 -16.6 -10.0 36 36 A V E +B 25 0B 16 -2,-0.4 -11,-0.3 -11,-0.2 3,-0.2 -0.465 53.7 146.9 -76.8 78.1 5.1 -14.6 -8.1 37 37 A K + 0 0 134 -2,-2.3 2,-0.7 -13,-1.8 -1,-0.2 0.861 67.1 45.8 -82.6 -35.5 3.3 -13.2 -11.2 38 38 A D >> - 0 0 55 -14,-1.2 3,-0.9 -3,-0.4 4,-0.5 -0.833 60.8-179.8-110.9 98.7 -0.2 -13.1 -9.6 39 39 A V G >4 S+ 0 0 48 -2,-0.7 3,-0.5 1,-0.3 -1,-0.2 0.797 87.6 54.7 -66.8 -24.2 -0.0 -11.6 -6.1 40 40 A E G 34 S+ 0 0 175 1,-0.2 -1,-0.3 -17,-0.1 -16,-0.1 0.667 91.7 73.1 -82.8 -14.4 -3.8 -12.2 -5.8 41 41 A G G <4 S+ 0 0 22 -3,-0.9 2,-0.4 -18,-0.3 -17,-0.3 0.771 104.1 40.3 -70.5 -22.0 -3.4 -15.9 -6.7 42 42 A A S << S- 0 0 2 -4,-0.5 -1,-0.2 -3,-0.5 -21,-0.1 -0.967 82.6-139.3-130.7 121.5 -1.9 -16.4 -3.2 43 43 A S >> - 0 0 61 -2,-0.4 4,-2.5 1,-0.1 5,-0.7 -0.298 36.4 -99.8 -71.7 161.5 -3.3 -14.7 -0.0 44 44 A Q H >5S+ 0 0 121 1,-0.3 4,-1.9 2,-0.2 5,-0.3 0.921 128.8 48.3 -48.9 -44.3 -0.8 -13.4 2.6 45 45 A E H >5S+ 0 0 139 3,-0.2 4,-2.2 2,-0.2 -1,-0.3 0.925 122.0 35.3 -64.7 -40.5 -1.5 -16.5 4.6 46 46 A E H >5S+ 0 0 85 2,-0.2 4,-2.9 3,-0.2 5,-0.4 0.982 119.0 46.0 -76.5 -67.3 -0.9 -18.7 1.5 47 47 A V H X5S+ 0 0 0 -4,-2.5 4,-2.1 1,-0.2 -3,-0.2 0.898 118.7 47.9 -41.3 -44.1 1.8 -16.8 -0.3 48 48 A E H >XX S+ 0 0 0 -4,-2.9 4,-1.0 -30,-0.4 3,-0.9 0.925 106.0 55.5 -60.6 -41.7 4.6 -21.1 0.6 51 51 A M H X< S+ 0 0 21 -4,-2.1 3,-0.8 -3,-0.6 -1,-0.2 0.919 107.6 48.5 -58.7 -41.0 7.5 -18.7 1.2 52 52 A D H 3< S+ 0 0 127 -4,-2.2 -1,-0.3 1,-0.2 -2,-0.2 0.679 104.6 62.1 -73.6 -13.3 8.4 -20.5 4.4 53 53 A T H << S+ 0 0 63 -3,-0.9 -1,-0.2 -4,-0.9 -2,-0.2 0.713 83.6 97.0 -84.0 -19.1 8.2 -23.8 2.4 54 54 A C S << S- 0 0 26 -4,-1.0 -43,-0.0 -3,-0.8 5,-0.0 -0.411 70.9-141.4 -70.1 147.7 11.0 -22.7 0.2 55 55 A P S S+ 0 0 89 0, 0.0 -1,-0.1 0, 0.0 -44,-0.1 0.960 100.5 17.3 -74.8 -55.2 14.5 -24.0 1.1 56 56 A V S S- 0 0 69 -46,-0.3 -2,-0.1 2,-0.0 -45,-0.1 0.640 99.3-132.7 -92.5 -14.8 16.5 -20.9 0.3 57 57 A Q - 0 0 82 1,-0.2 2,-0.2 -47,-0.1 -46,-0.1 0.993 27.7-176.0 63.2 59.8 13.5 -18.6 0.3 58 58 A C + 0 0 10 -48,-0.3 -51,-2.4 -52,-0.0 2,-0.4 0.122 54.5 97.1 -76.4 28.7 14.3 -16.8 -3.0 59 59 A I E -A 6 0A 6 -53,-0.2 2,-0.3 -2,-0.2 -53,-0.3 -0.900 49.9-178.5-118.8 148.4 11.2 -14.6 -2.3 60 60 A H E -A 5 0A 91 -55,-1.7 -55,-0.9 -2,-0.4 -2,-0.0 -0.976 26.8-121.1-147.3 131.2 11.1 -11.2 -0.7 61 61 A W - 0 0 85 -2,-0.3 2,-0.6 -57,-0.3 -57,-0.4 -0.303 23.8-137.4 -67.0 154.9 8.1 -8.9 0.1 62 62 A E + 0 0 81 -59,-0.4 -59,-2.1 1,-0.1 -1,-0.1 -0.911 28.8 168.2-119.6 108.9 8.1 -5.5 -1.5 63 63 A D 0 0 121 -2,-0.6 -1,-0.1 -61,-0.2 -59,-0.0 0.858 360.0 360.0 -85.9 -36.8 7.1 -2.5 0.8 64 64 A E 0 0 225 -62,-0.0 -2,-0.1 -61,-0.0 0, 0.0 0.807 360.0 360.0-107.2 360.0 8.1 0.2 -1.6