==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 13-DEC-05 2DA3 . COMPND 2 MOLECULE: ALPHA-FETOPROTEIN ENHANCER BINDING PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.OHNISHI,T.KIGAWA,T.TOMIZAWA,S.KOSHIBA,M.INOUE,S.YOKOYAMA, . 80 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7313.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 43 53.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 40.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 135 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 82.3 10.5 -9.2 28.8 2 2 A S + 0 0 126 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.942 360.0 144.5-131.2 152.5 7.1 -10.9 28.4 3 3 A S + 0 0 132 -2,-0.3 2,-0.0 2,-0.0 0, 0.0 -0.977 6.5 153.7-171.2 172.0 5.8 -13.8 26.3 4 4 A G + 0 0 75 -2,-0.3 2,-0.2 2,-0.0 -2,-0.0 -0.053 12.7 168.0 148.9 105.5 3.4 -16.7 26.2 5 5 A S - 0 0 126 -2,-0.0 2,-0.3 2,-0.0 -2,-0.0 -0.784 19.3-138.6-128.7 172.2 1.8 -18.5 23.3 6 6 A S + 0 0 124 -2,-0.2 2,-0.3 2,-0.0 -2,-0.0 -0.939 20.9 167.4-133.2 155.2 -0.2 -21.7 22.6 7 7 A G + 0 0 82 -2,-0.3 -2,-0.0 1,-0.0 0, 0.0 -0.880 18.2 147.5-152.2-176.9 -0.3 -24.3 19.9 8 8 A G + 0 0 79 -2,-0.3 2,-0.3 1,-0.2 -1,-0.0 0.451 41.0 106.2 138.8 68.3 -1.5 -27.7 18.9 9 9 A T - 0 0 134 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.860 65.2-105.6-168.0 129.5 -2.3 -28.3 15.3 10 10 A G - 0 0 60 -2,-0.3 2,-0.1 1,-0.1 0, 0.0 -0.251 38.6-137.6 -57.6 140.4 -0.7 -30.2 12.4 11 11 A G - 0 0 68 1,-0.0 2,-0.3 0, 0.0 -1,-0.1 -0.270 9.1-132.8 -92.3-178.3 0.9 -28.0 9.8 12 12 A E - 0 0 153 1,-0.1 -1,-0.0 -2,-0.1 0, 0.0 -0.968 34.0 -78.1-137.7 152.8 0.9 -28.1 6.0 13 13 A E - 0 0 137 -2,-0.3 -1,-0.1 1,-0.1 0, 0.0 0.016 57.8-100.6 -44.4 151.8 3.5 -27.9 3.2 14 14 A P - 0 0 95 0, 0.0 2,-0.6 0, 0.0 -1,-0.1 -0.057 34.6-100.6 -69.7 176.0 4.8 -24.4 2.4 15 15 A Q + 0 0 145 2,-0.0 2,-0.4 0, 0.0 -2,-0.0 -0.901 44.7 171.0-107.7 113.4 3.6 -22.3 -0.6 16 16 A R + 0 0 220 -2,-0.6 2,-0.3 2,-0.0 0, 0.0 -0.956 5.9 147.5-124.0 140.8 6.0 -22.2 -3.5 17 17 A D > - 0 0 105 -2,-0.4 3,-0.7 3,-0.0 2,-0.3 -0.981 52.5-115.8-164.8 157.5 5.4 -20.7 -7.0 18 18 A K T 3 S+ 0 0 194 -2,-0.3 -2,-0.0 1,-0.2 0, 0.0 -0.174 91.9 92.6 -91.9 40.7 7.2 -19.0 -9.9 19 19 A R T 3 + 0 0 156 -2,-0.3 2,-0.6 2,-0.1 -1,-0.2 0.653 50.7 107.2-103.5 -23.5 5.2 -15.9 -9.5 20 20 A L < + 0 0 91 -3,-0.7 2,-0.3 36,-0.1 36,-0.1 -0.434 50.0 172.0 -61.9 108.8 7.6 -14.0 -7.2 21 21 A R - 0 0 172 -2,-0.6 36,-0.7 34,-0.4 -2,-0.1 -0.813 40.1-128.7-119.9 160.9 9.1 -11.3 -9.3 22 22 A T S S+ 0 0 102 -2,-0.3 -1,-0.1 34,-0.1 -2,-0.0 0.976 90.3 62.1 -70.5 -57.8 11.4 -8.4 -8.7 23 23 A T S S- 0 0 107 1,-0.1 -2,-0.2 33,-0.0 2,-0.2 -0.265 88.0-115.5 -68.3 156.9 9.4 -5.7 -10.4 24 24 A I - 0 0 45 32,-0.1 -1,-0.1 36,-0.1 -2,-0.1 -0.538 22.2-130.3 -93.0 160.6 5.9 -4.8 -9.2 25 25 A T > - 0 0 53 -2,-0.2 4,-2.4 1,-0.1 3,-0.4 -0.788 15.8-125.4-111.6 154.7 2.6 -5.2 -11.1 26 26 A P T 4 S+ 0 0 104 0, 0.0 4,-0.5 0, 0.0 -1,-0.1 0.633 114.1 50.4 -69.8 -13.7 -0.3 -2.8 -11.7 27 27 A E T 4 S+ 0 0 167 2,-0.1 4,-0.4 3,-0.1 -3,-0.0 0.666 112.6 44.6 -96.4 -21.9 -2.7 -5.4 -10.2 28 28 A Q T >> S+ 0 0 28 -3,-0.4 4,-1.5 2,-0.1 3,-0.8 0.867 100.6 66.2 -88.3 -43.1 -0.6 -6.0 -7.1 29 29 A L H 3X S+ 0 0 37 -4,-2.4 4,-3.0 1,-0.2 3,-0.4 0.911 90.8 65.7 -43.2 -55.1 0.2 -2.4 -6.2 30 30 A E H 3> S+ 0 0 114 -4,-0.5 4,-3.1 1,-0.3 5,-0.3 0.864 102.8 47.1 -34.0 -57.5 -3.5 -1.7 -5.5 31 31 A I H <> S+ 0 0 50 -3,-0.8 4,-2.6 -4,-0.4 -1,-0.3 0.921 113.7 48.0 -54.0 -48.3 -3.4 -4.1 -2.6 32 32 A L H X S+ 0 0 0 -4,-1.5 4,-2.7 -3,-0.4 -2,-0.2 0.939 113.2 47.2 -59.1 -49.6 -0.2 -2.5 -1.3 33 33 A Y H X S+ 0 0 106 -4,-3.0 4,-2.9 1,-0.2 5,-0.2 0.920 113.7 47.9 -58.8 -46.2 -1.6 1.1 -1.7 34 34 A Q H X S+ 0 0 124 -4,-3.1 4,-1.2 -5,-0.3 -1,-0.2 0.884 115.2 45.4 -62.7 -39.7 -4.8 0.1 0.1 35 35 A K H X S+ 0 0 64 -4,-2.6 4,-2.3 -5,-0.3 -1,-0.2 0.826 114.2 49.7 -73.0 -32.5 -2.9 -1.6 2.9 36 36 A Y H < S+ 0 0 14 -4,-2.7 -2,-0.2 2,-0.2 -3,-0.2 0.944 105.3 54.5 -71.2 -50.1 -0.5 1.3 3.2 37 37 A L H < S+ 0 0 122 -4,-2.9 3,-0.2 1,-0.2 -1,-0.2 0.865 120.0 34.7 -51.7 -39.2 -3.2 4.0 3.3 38 38 A L H < S+ 0 0 120 -4,-1.2 2,-0.4 1,-0.3 -1,-0.2 0.817 133.9 27.3 -85.2 -34.4 -4.7 2.1 6.3 39 39 A D < + 0 0 52 -4,-2.3 -1,-0.3 -5,-0.2 -2,-0.1 -0.891 56.9 154.8-134.8 104.0 -1.4 0.9 7.7 40 40 A S S S+ 0 0 37 -2,-0.4 29,-0.1 -3,-0.2 -1,-0.1 0.455 80.9 47.7-103.6 -5.5 1.7 3.0 7.0 41 41 A N S S+ 0 0 118 -5,-0.1 -1,-0.2 28,-0.0 -5,-0.0 -0.295 79.1 158.3-130.6 48.1 3.6 1.7 10.1 42 42 A P - 0 0 25 0, 0.0 2,-0.2 0, 0.0 -6,-0.0 -0.215 36.9-116.6 -69.7 162.3 3.0 -2.1 9.9 43 43 A T >> - 0 0 88 1,-0.1 4,-2.0 0, 0.0 3,-0.8 -0.647 32.7 -96.4-101.1 159.0 5.3 -4.6 11.6 44 44 A R H 3> S+ 0 0 159 1,-0.3 4,-2.4 -2,-0.2 5,-0.2 0.835 125.4 59.3 -37.4 -43.1 7.5 -7.3 10.0 45 45 A K H 3> S+ 0 0 165 2,-0.2 4,-2.4 1,-0.2 -1,-0.3 0.953 107.9 42.3 -53.5 -56.0 4.6 -9.7 10.6 46 46 A M H <> S+ 0 0 72 -3,-0.8 4,-3.1 1,-0.2 5,-0.4 0.957 112.0 53.5 -56.6 -55.0 2.2 -7.7 8.5 47 47 A L H X S+ 0 0 16 -4,-2.0 4,-1.9 1,-0.2 -1,-0.2 0.862 110.8 49.2 -48.6 -39.9 4.7 -7.0 5.8 48 48 A D H X S+ 0 0 92 -4,-2.4 4,-0.8 -5,-0.3 -1,-0.2 0.942 115.3 42.0 -66.5 -49.3 5.3 -10.8 5.6 49 49 A H H >X S+ 0 0 109 -4,-2.4 4,-2.2 2,-0.2 3,-1.7 0.979 114.5 49.3 -62.0 -59.0 1.6 -11.6 5.4 50 50 A I H 3X S+ 0 0 9 -4,-3.1 4,-2.9 1,-0.3 5,-0.3 0.900 111.4 50.3 -47.1 -48.3 0.7 -8.8 2.9 51 51 A A H 3X>S+ 0 0 6 -4,-1.9 5,-1.6 -5,-0.4 4,-0.6 0.719 110.8 51.9 -64.5 -20.5 3.6 -9.9 0.7 52 52 A H H <<5S+ 0 0 111 -3,-1.7 -2,-0.2 -4,-0.8 -1,-0.2 0.824 113.0 41.8 -84.3 -35.1 2.2 -13.4 1.0 53 53 A E H <5S+ 0 0 95 -4,-2.2 -2,-0.2 1,-0.2 -3,-0.2 0.863 119.1 44.1 -79.2 -38.7 -1.3 -12.5 -0.1 54 54 A V H <5S- 0 0 8 -4,-2.9 -3,-0.2 -5,-0.3 -2,-0.2 0.742 106.1-129.2 -77.2 -24.2 -0.3 -10.1 -2.8 55 55 A G T <5 + 0 0 6 -4,-0.6 2,-0.4 -5,-0.3 -34,-0.4 0.891 60.1 134.2 76.8 41.0 2.3 -12.6 -4.0 56 56 A L S - 0 0 96 -36,-0.7 4,-2.3 -2,-0.4 3,-0.3 -0.033 39.7-133.7 -35.7 114.5 8.8 -10.5 -2.8 58 58 A K H > S+ 0 0 50 1,-0.3 4,-2.7 2,-0.2 5,-0.2 0.880 106.4 53.1 -40.3 -50.5 8.4 -9.8 0.9 59 59 A R H > S+ 0 0 159 1,-0.2 4,-3.1 2,-0.2 5,-0.4 0.939 108.1 48.8 -52.9 -52.7 11.5 -7.5 0.6 60 60 A V H > S+ 0 0 38 -3,-0.3 4,-1.9 1,-0.2 -1,-0.2 0.861 115.1 45.8 -56.6 -37.3 10.0 -5.5 -2.2 61 61 A V H X S+ 0 0 0 -4,-2.3 4,-0.5 -5,-0.2 -1,-0.2 0.811 113.3 50.1 -75.8 -31.2 6.8 -5.2 -0.2 62 62 A Q H >X S+ 0 0 32 -4,-2.7 4,-1.5 -5,-0.3 3,-0.6 0.940 116.7 38.5 -72.1 -49.4 8.7 -4.2 2.9 63 63 A V H 3X S+ 0 0 43 -4,-3.1 4,-3.0 1,-0.2 5,-0.3 0.907 105.2 67.0 -68.0 -43.1 10.9 -1.6 1.3 64 64 A W H 3X S+ 0 0 31 -4,-1.9 4,-1.3 -5,-0.4 -1,-0.2 0.776 106.2 45.6 -48.6 -27.6 8.1 -0.3 -0.9 65 65 A F H