==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 14-DEC-05 2DB2 . COMPND 2 MOLECULE: KIAA0890 PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.ABE,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, . 119 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7963.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 76 63.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 11.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 39 32.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 51 A G 0 0 131 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 146.8 6.8 20.2 -16.4 2 52 A S + 0 0 137 1,-0.0 2,-0.2 0, 0.0 0, 0.0 0.911 360.0 46.9 -90.2 -55.1 9.6 20.3 -19.0 3 53 A S + 0 0 120 2,-0.0 -1,-0.0 1,-0.0 0, 0.0 -0.531 55.0 142.8 -88.8 156.3 12.2 17.8 -17.6 4 54 A G + 0 0 75 -2,-0.2 2,-0.3 2,-0.0 -1,-0.0 0.026 16.2 152.7 168.9 70.3 11.4 14.4 -16.3 5 55 A S - 0 0 113 2,-0.2 2,-0.4 1,-0.0 -2,-0.0 -0.719 49.5 -94.9-110.4 161.5 13.8 11.5 -16.9 6 56 A S S S+ 0 0 128 -2,-0.3 -2,-0.0 2,-0.0 2,-0.0 -0.603 83.7 73.0 -77.6 126.7 14.5 8.3 -15.0 7 57 A G - 0 0 71 -2,-0.4 2,-0.8 1,-0.0 -2,-0.2 0.077 57.1-145.7 133.0 114.9 17.4 8.6 -12.6 8 58 A A + 0 0 68 1,-0.2 4,-0.2 -2,-0.0 -2,-0.0 -0.843 15.1 178.8-108.3 97.3 17.8 10.4 -9.2 9 59 A S + 0 0 125 -2,-0.8 -1,-0.2 2,-0.1 2,-0.1 0.929 66.7 70.6 -60.5 -47.3 21.4 11.7 -8.9 10 60 A R S S- 0 0 222 1,-0.1 2,-0.4 2,-0.0 3,-0.1 -0.384 100.0 -98.7 -72.3 149.9 20.7 13.2 -5.5 11 61 A D - 0 0 113 1,-0.2 3,-0.5 -2,-0.1 4,-0.4 -0.560 25.0-156.7 -72.9 122.6 20.1 11.0 -2.5 12 62 A L S >> S+ 0 0 34 -2,-0.4 3,-2.4 1,-0.2 4,-2.0 0.904 88.6 69.7 -65.1 -42.4 16.4 10.5 -1.8 13 63 A L T 34 S+ 0 0 45 1,-0.3 -1,-0.2 2,-0.2 5,-0.1 0.852 83.2 74.0 -42.9 -41.5 17.0 9.6 1.9 14 64 A K T 34 S+ 0 0 168 -3,-0.5 -1,-0.3 1,-0.3 -2,-0.2 0.856 110.3 28.6 -41.1 -44.1 18.0 13.2 2.3 15 65 A E T <4 S+ 0 0 117 -3,-2.4 -1,-0.3 -4,-0.4 -2,-0.2 0.825 129.1 43.5 -87.6 -36.5 14.3 14.1 2.1 16 66 A F < + 0 0 6 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.1 -0.783 61.4 161.3-115.0 87.6 13.1 10.8 3.5 17 67 A P S S+ 0 0 79 0, 0.0 3,-0.2 0, 0.0 -1,-0.2 0.922 79.6 33.6 -69.8 -46.4 15.2 9.8 6.5 18 68 A Q > + 0 0 91 1,-0.2 4,-3.2 2,-0.1 3,-0.3 -0.658 66.6 154.3-114.1 74.6 12.7 7.3 7.9 19 69 A P H >>S+ 0 0 0 0, 0.0 4,-1.5 0, 0.0 5,-0.6 0.778 72.4 61.1 -69.7 -27.7 11.0 5.8 4.9 20 70 A K H >5S+ 0 0 68 -3,-0.2 4,-0.5 3,-0.2 -2,-0.1 0.851 118.6 27.4 -68.1 -35.1 10.2 2.6 6.8 21 71 A N H >5S+ 0 0 100 -3,-0.3 4,-2.3 3,-0.1 -1,-0.1 0.832 123.6 50.0 -93.7 -41.0 8.1 4.6 9.3 22 72 A L H X5S+ 0 0 34 -4,-3.2 4,-1.6 2,-0.2 -2,-0.2 0.978 115.1 41.7 -61.9 -58.5 7.0 7.4 7.1 23 73 A L H >X5S+ 0 0 0 -4,-1.5 4,-1.2 -5,-0.2 3,-1.0 0.960 116.5 48.1 -53.6 -58.1 5.8 5.3 4.2 24 74 A N H 3XS+ 0 0 0 -4,-1.2 4,-2.5 1,-0.3 5,-1.7 0.821 114.5 63.6 -54.0 -32.3 -1.0 3.5 4.1 28 78 A G H 3<>S+ 0 0 13 -4,-2.8 5,-1.1 -5,-0.3 -1,-0.3 0.779 109.6 38.6 -64.2 -26.5 -1.5 2.8 7.8 29 79 A R H <<5S+ 0 0 136 -3,-2.0 -2,-0.2 -4,-1.1 -1,-0.2 0.852 119.1 45.1 -90.3 -42.1 -3.6 6.0 8.0 30 80 A A H <5S- 0 0 3 -4,-2.3 -2,-0.2 -5,-0.2 -3,-0.2 0.964 141.4 -2.8 -66.2 -54.3 -5.4 5.7 4.7 31 81 A L T <5S- 0 0 49 -4,-2.5 -3,-0.2 -5,-0.2 2,-0.2 0.839 116.5 -71.8-102.6 -66.5 -6.2 2.0 5.0 32 82 A G T >>< - 0 0 14 -5,-1.7 4,-3.1 1,-0.1 3,-1.0 -0.538 22.6-117.3 163.1 128.6 -4.7 0.6 8.2 33 83 A I H 3> S+ 0 0 101 -3,-1.0 3,-2.2 1,-0.2 4,-1.5 0.942 102.2 69.2 -71.4 -49.6 -3.4 -3.9 6.1 36 86 A A H 3X S+ 0 0 0 -4,-3.1 4,-2.8 1,-0.3 -1,-0.2 0.805 82.2 80.2 -37.4 -37.2 -0.4 -1.9 5.0 37 87 A K H 3< S+ 0 0 150 -4,-1.2 -1,-0.3 -5,-0.3 -2,-0.2 0.881 105.4 28.3 -38.2 -54.0 1.5 -5.0 6.0 38 88 A D H <4 S+ 0 0 87 -3,-2.2 -1,-0.3 -4,-0.3 -2,-0.2 0.865 111.4 68.9 -78.2 -38.7 0.6 -6.6 2.6 39 89 A K H < S+ 0 0 57 -4,-1.5 19,-0.9 1,-0.2 2,-0.7 0.882 102.5 49.4 -46.3 -44.8 0.3 -3.3 0.8 40 90 A L E < S-A 57 0A 12 -4,-2.8 2,-0.4 17,-0.2 17,-0.2 -0.868 76.6-178.4-104.4 107.2 4.1 -3.0 1.1 41 91 A V E -A 56 0A 59 15,-2.1 15,-2.6 -2,-0.7 2,-0.5 -0.853 12.6-153.5-107.4 140.1 5.9 -6.1 -0.0 42 92 A Y E -A 55 0A 58 -2,-0.4 2,-0.5 13,-0.2 13,-0.2 -0.951 7.2-168.3-116.6 123.9 9.7 -6.5 0.0 43 93 A V E -A 54 0A 68 11,-1.3 11,-2.7 -2,-0.5 2,-0.3 -0.943 7.5-155.0-114.8 120.9 11.5 -8.9 -2.3 44 94 A H E -A 53 0A 75 -2,-0.5 2,-0.2 9,-0.2 9,-0.2 -0.711 9.7-159.2 -94.6 143.5 15.2 -9.7 -1.8 45 95 A T - 0 0 61 7,-1.7 2,-0.4 -2,-0.3 7,-0.3 -0.731 4.2-150.9-117.4 167.3 17.5 -10.8 -4.6 46 96 A N + 0 0 146 -2,-0.2 3,-0.1 5,-0.1 5,-0.1 -0.990 62.3 55.2-143.2 130.9 20.8 -12.7 -4.8 47 97 A G S S+ 0 0 68 1,-0.6 4,-0.1 -2,-0.4 2,-0.1 -0.308 74.9 89.5 150.8 -60.0 23.6 -12.6 -7.3 48 98 A P S S- 0 0 68 0, 0.0 -1,-0.6 0, 0.0 4,-0.1 -0.344 85.6-107.3 -69.8 149.3 24.9 -9.0 -7.7 49 99 A K S S+ 0 0 211 -3,-0.1 2,-0.2 2,-0.1 -2,-0.1 0.906 107.3 44.4 -38.2 -64.2 27.7 -7.8 -5.4 50 100 A K S S- 0 0 121 1,-0.1 2,-0.2 -4,-0.0 20,-0.1 -0.614 95.7-111.4 -87.7 146.3 25.4 -5.5 -3.4 51 101 A K E - B 0 69A 70 18,-0.7 18,-0.9 19,-0.3 2,-0.3 -0.495 31.7-158.4 -76.7 143.9 22.0 -6.8 -2.2 52 102 A K E - B 0 68A 43 -7,-0.3 -7,-1.7 -2,-0.2 2,-0.4 -0.934 6.6-158.0-125.5 148.4 18.8 -5.3 -3.7 53 103 A V E -AB 44 67A 0 14,-2.0 14,-1.3 -2,-0.3 2,-0.8 -0.979 6.4-152.9-130.5 122.0 15.2 -5.1 -2.5 54 104 A T E -AB 43 66A 33 -11,-2.7 -11,-1.3 -2,-0.4 2,-0.9 -0.810 11.4-153.6 -96.5 104.8 12.2 -4.6 -4.7 55 105 A L E -AB 42 65A 0 10,-2.0 10,-1.4 -2,-0.8 2,-0.9 -0.673 7.0-158.5 -81.0 106.4 9.4 -2.9 -2.8 56 106 A H E -AB 41 64A 66 -15,-2.6 -15,-2.1 -2,-0.9 2,-0.3 -0.755 13.1-170.9 -89.8 103.0 6.1 -4.0 -4.4 57 107 A I E +AB 40 63A 2 6,-2.3 6,-2.6 -2,-0.9 -17,-0.2 -0.681 19.5 176.4 -95.1 148.3 3.5 -1.4 -3.5 58 108 A K + 0 0 88 -19,-0.9 -1,-0.1 -2,-0.3 -18,-0.1 0.705 45.1 105.1-115.5 -41.8 -0.2 -1.7 -4.2 59 109 A W S S+ 0 0 15 -20,-0.2 -1,-0.2 1,-0.1 2,-0.2 -0.795 93.7 1.6-100.4 138.5 -1.8 1.3 -2.6 60 110 A P S S- 0 0 14 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.798 145.1 -12.1 -69.7 -41.1 -2.8 3.6 -3.8 61 111 A K S S- 0 0 91 -2,-0.2 2,-0.9 51,-0.0 52,-0.1 -0.666 83.6 -83.7-113.1 169.9 -1.9 2.0 -7.1 62 112 A S + 0 0 91 -2,-0.2 2,-0.3 -6,-0.0 -4,-0.3 -0.632 68.0 144.5 -77.6 106.2 0.2 -1.1 -8.1 63 113 A V E -B 57 0A 27 -6,-2.6 -6,-2.3 -2,-0.9 2,-0.3 -0.889 30.3-156.8-138.0 168.1 3.8 0.1 -8.2 64 114 A E E -B 56 0A 94 -2,-0.3 2,-0.3 -8,-0.3 -8,-0.2 -0.989 6.1-172.9-147.4 153.3 7.3 -1.2 -7.4 65 115 A V E -B 55 0A 18 -10,-1.4 -10,-2.0 -2,-0.3 2,-0.3 -0.966 20.4-122.3-145.0 159.8 10.7 0.3 -6.6 66 116 A E E -B 54 0A 104 -2,-0.3 2,-0.4 -12,-0.2 -12,-0.2 -0.809 18.7-163.0-106.4 146.0 14.3 -0.9 -6.1 67 117 A G E -B 53 0A 0 -14,-1.3 -14,-2.0 -2,-0.3 2,-0.2 -0.961 3.3-166.1-134.0 118.6 16.4 -0.4 -3.0 68 118 A Y E +B 52 0A 104 -2,-0.4 10,-0.4 -16,-0.2 2,-0.3 -0.628 23.2 132.6 -99.2 158.7 20.2 -0.7 -2.8 69 119 A G E -B 51 0A 16 -18,-0.9 -18,-0.7 -2,-0.2 6,-0.1 -0.898 57.8-107.3 170.1 161.6 22.4 -1.0 0.3 70 120 A S S S+ 0 0 107 -2,-0.3 -19,-0.3 -20,-0.1 2,-0.2 0.970 101.4 28.1 -70.2 -56.0 25.2 -2.8 2.1 71 121 A K S > S- 0 0 147 -3,-0.1 4,-2.5 -21,-0.1 5,-0.2 -0.491 95.3 -96.5-101.4 173.3 23.1 -4.6 4.7 72 122 A K H > S+ 0 0 119 1,-0.2 4,-2.9 2,-0.2 5,-0.2 0.933 126.5 45.1 -53.3 -51.1 19.5 -5.9 4.6 73 123 A I H > S+ 0 0 64 1,-0.2 4,-2.9 2,-0.2 -1,-0.2 0.909 109.5 56.4 -60.6 -43.9 18.2 -2.8 6.4 74 124 A D H > S+ 0 0 65 2,-0.2 4,-1.6 1,-0.2 -1,-0.2 0.927 113.6 39.5 -53.9 -49.6 20.4 -0.5 4.2 75 125 A A H X S+ 0 0 0 -4,-2.5 4,-1.9 2,-0.2 -2,-0.2 0.964 114.2 52.0 -65.9 -54.4 18.7 -1.9 1.0 76 126 A E H X S+ 0 0 28 -4,-2.9 4,-1.9 -5,-0.2 5,-0.2 0.890 106.4 57.0 -49.3 -44.6 15.2 -2.1 2.4 77 127 A R H X S+ 0 0 84 -4,-2.9 4,-2.5 -5,-0.2 -1,-0.2 0.956 105.9 48.3 -52.5 -57.8 15.5 1.6 3.5 78 128 A Q H X S+ 0 0 55 -4,-1.6 4,-2.9 -10,-0.4 5,-0.3 0.950 106.4 56.8 -47.9 -61.8 16.2 2.8 0.0 79 129 A A H X S+ 0 0 0 -4,-1.9 4,-0.8 1,-0.3 3,-0.4 0.885 110.5 43.7 -35.4 -63.6 13.4 0.9 -1.6 80 130 A A H >X S+ 0 0 0 -4,-1.9 4,-2.0 1,-0.3 3,-1.7 0.923 113.1 51.8 -51.1 -50.6 10.8 2.6 0.7 81 131 A A H 3X S+ 0 0 0 -4,-2.5 4,-1.1 1,-0.3 -1,-0.3 0.848 101.6 61.9 -56.2 -35.7 12.5 6.0 0.2 82 132 A A H 3< S+ 0 0 14 -4,-2.9 4,-0.3 -3,-0.4 -1,-0.3 0.738 109.4 42.2 -63.4 -22.3 12.2 5.4 -3.5 83 133 A A H XX S+ 0 0 0 -3,-1.7 4,-1.8 -4,-0.8 3,-1.3 0.796 97.0 73.5 -92.6 -35.1 8.5 5.3 -3.1 84 134 A C H 3X S+ 0 0 0 -4,-2.0 4,-1.9 1,-0.3 -2,-0.2 0.857 93.8 57.2 -46.4 -40.4 8.2 8.2 -0.7 85 135 A Q H 3X S+ 0 0 81 -4,-1.1 4,-2.2 1,-0.2 -1,-0.3 0.872 104.5 51.5 -60.5 -38.2 8.8 10.5 -3.6 86 136 A L H <> S+ 0 0 46 -3,-1.3 4,-2.4 -4,-0.3 -1,-0.2 0.904 108.9 49.6 -66.0 -42.5 5.9 9.0 -5.5 87 137 A F H X>S+ 0 0 0 -4,-1.8 5,-3.0 2,-0.2 4,-1.7 0.844 110.4 52.4 -65.3 -34.2 3.5 9.6 -2.5 88 138 A K H <5S+ 0 0 51 -4,-1.9 6,-0.3 -5,-0.3 -2,-0.2 0.959 113.7 40.3 -67.0 -52.7 4.7 13.2 -2.2 89 139 A G H <5S+ 0 0 71 -4,-2.2 -2,-0.2 1,-0.2 -1,-0.2 0.870 112.6 56.6 -64.9 -37.5 4.1 14.1 -5.9 90 140 A W H <5S- 0 0 65 -4,-2.4 -1,-0.2 -5,-0.2 -2,-0.2 0.896 118.4-109.2 -61.3 -41.7 0.9 12.2 -5.9 91 141 A G T <5S+ 0 0 21 -4,-1.7 -3,-0.2 -5,-0.2 -2,-0.1 0.642 88.1 111.1 116.9 27.1 -0.5 14.2 -3.0 92 142 A L S - 0 0 10 -6,-0.3 3,-0.7 3,-0.2 -2,-0.1 -0.699 38.7 -51.9 120.3-173.5 2.5 17.0 0.9 95 145 A P T 3 S+ 0 0 114 0, 0.0 -1,-0.2 0, 0.0 -7,-0.0 0.877 139.2 29.1 -69.7 -39.6 5.2 19.7 0.7 96 146 A R T 3 S- 0 0 189 -3,-0.2 3,-0.1 2,-0.1 -2,-0.1 -0.076 120.9 -98.6-111.7 31.4 6.4 19.1 4.2 97 147 A N < + 0 0 53 -3,-0.7 2,-0.8 1,-0.2 -3,-0.2 0.902 68.5 161.7 53.4 44.7 5.5 15.5 4.4 98 148 A E - 0 0 107 -5,-0.4 -1,-0.2 1,-0.0 -2,-0.1 -0.837 31.3-140.7-101.5 102.9 2.3 16.3 6.2 99 149 A L - 0 0 45 -2,-0.8 2,-0.2 -3,-0.1 -6,-0.1 0.160 17.7-132.6 -48.6 175.7 -0.2 13.4 6.1 100 150 A F - 0 0 58 -8,-0.3 2,-0.2 -74,-0.1 -1,-0.1 -0.640 29.2 -69.0-126.0-176.3 -3.9 14.1 5.6 101 151 A D > - 0 0 123 -2,-0.2 4,-2.1 1,-0.1 3,-0.3 -0.500 43.5-116.4 -78.2 145.6 -7.2 13.0 7.1 102 152 A A H > S+ 0 0 52 1,-0.2 4,-2.2 2,-0.2 3,-0.3 0.924 114.5 56.2 -42.9 -60.4 -8.4 9.4 6.5 103 153 A A H > S+ 0 0 72 1,-0.3 4,-1.4 2,-0.2 -1,-0.2 0.889 107.5 49.1 -39.3 -54.6 -11.5 10.6 4.5 104 154 A K H >> S+ 0 0 85 -3,-0.3 4,-2.9 1,-0.2 3,-0.6 0.922 107.5 54.5 -53.8 -48.4 -9.2 12.4 2.1 105 155 A Y H 3X S+ 0 0 0 -4,-2.1 4,-2.1 -3,-0.3 5,-0.2 0.886 101.6 59.5 -53.8 -41.8 -7.0 9.3 1.7 106 156 A R H 3X S+ 0 0 148 -4,-2.2 4,-1.0 -3,-0.2 -1,-0.2 0.897 112.2 38.7 -54.7 -43.3 -10.0 7.3 0.8 107 157 A V H