==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 15-DEC-05 2DBC . COMPND 2 MOLECULE: UNNAMED PROTEIN PRODUCT; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR C.KUROSAKI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL . 135 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8493.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 79 58.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 10 7.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 8.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 8.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 20.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 136 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-163.9 7.5 27.0 0.3 2 2 A S - 0 0 127 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.925 360.0-172.7-134.9 159.2 7.2 24.4 -2.5 3 3 A S - 0 0 128 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 0.742 51.7 -91.4-114.0 -62.0 8.8 23.7 -5.9 4 4 A G - 0 0 53 2,-0.0 2,-0.7 0, 0.0 -2,-0.0 0.260 23.3-132.7 138.5 92.0 7.0 20.9 -7.7 5 5 A S - 0 0 94 1,-0.0 2,-0.3 0, 0.0 56,-0.1 -0.523 27.7-148.2 -68.6 108.6 7.7 17.2 -7.5 6 6 A S - 0 0 97 -2,-0.7 2,-0.1 1,-0.1 -2,-0.0 -0.583 18.6-110.9 -81.0 138.7 7.8 16.0 -11.1 7 7 A G + 0 0 39 -2,-0.3 54,-0.1 1,-0.1 -1,-0.1 -0.418 36.9 170.2 -70.2 141.5 6.6 12.4 -11.8 8 8 A K + 0 0 161 52,-0.4 -1,-0.1 -2,-0.1 2,-0.1 0.658 62.5 43.5-118.8 -36.6 9.2 9.9 -12.9 9 9 A F + 0 0 66 51,-0.9 3,-0.1 47,-0.1 53,-0.1 -0.395 45.1 169.9-103.3-177.5 7.4 6.6 -12.7 10 10 A G + 0 0 29 1,-0.3 2,-0.3 -2,-0.1 47,-0.2 0.227 55.9 54.7 174.2 37.4 4.0 5.5 -13.8 11 11 A E S S- 0 0 113 45,-0.3 2,-0.6 49,-0.1 53,-0.4 -0.978 78.8 -93.7-170.2 165.0 3.6 1.7 -13.6 12 12 A L + 0 0 35 -2,-0.3 2,-0.2 41,-0.2 53,-0.2 -0.816 43.5 179.6 -95.5 121.6 4.0 -1.4 -11.4 13 13 A R E -a 65 0A 94 51,-1.2 53,-1.5 -2,-0.6 2,-0.4 -0.722 20.2-128.1-116.4 167.3 7.3 -3.2 -11.6 14 14 A E E -a 66 0A 110 -2,-0.2 2,-0.3 51,-0.2 53,-0.2 -0.918 20.3-169.8-119.1 143.9 8.8 -6.2 -9.9 15 15 A I - 0 0 25 51,-1.3 53,-0.2 -2,-0.4 2,-0.1 -0.877 19.9-115.1-129.0 161.5 12.1 -6.6 -8.0 16 16 A S > - 0 0 80 -2,-0.3 4,-1.7 51,-0.1 -1,-0.0 -0.281 33.9-101.9 -87.4 176.3 14.2 -9.4 -6.6 17 17 A G H >> S+ 0 0 34 2,-0.2 3,-1.1 1,-0.2 4,-0.8 0.992 121.0 45.6 -62.3 -64.8 15.0 -10.1 -2.9 18 18 A N H 3> S+ 0 0 132 1,-0.3 4,-1.1 2,-0.2 -1,-0.2 0.750 115.0 53.6 -51.3 -23.7 18.6 -8.8 -2.8 19 19 A Q H 3> S+ 0 0 89 2,-0.2 4,-2.8 1,-0.2 5,-0.4 0.831 87.9 77.1 -80.8 -34.7 17.1 -5.8 -4.7 20 20 A Y H S+ 0 0 45 -4,-1.7 4,-2.2 -3,-1.1 5,-1.0 0.867 105.4 36.0 -41.4 -46.0 14.4 -5.2 -2.2 21 21 A V H <>S+ 0 0 63 -4,-0.8 5,-3.0 3,-0.2 6,-0.2 0.992 117.1 46.7 -72.7 -69.3 17.0 -3.6 0.0 22 22 A N H <5S+ 0 0 83 -4,-1.1 -2,-0.2 3,-0.2 -1,-0.2 0.718 126.8 37.4 -46.7 -20.6 19.3 -1.9 -2.5 23 23 A E H <5S+ 0 0 68 -4,-2.8 -2,-0.2 -5,-0.1 -3,-0.2 0.882 132.2 17.9 -95.3 -74.5 16.0 -0.6 -3.9 24 24 A V T ><5S+ 0 0 1 -4,-2.2 3,-2.4 -5,-0.4 66,-0.2 0.993 132.9 41.2 -63.2 -65.0 13.6 0.1 -1.1 25 25 A T T 3 - 0 0 84 3,-0.4 3,-0.7 -2,-0.3 7,-0.4 -0.996 26.5-136.1-138.1 131.5 1.7 -15.1 -4.0 40 40 A S T 3 S+ 0 0 114 -2,-0.4 -1,-0.1 1,-0.3 28,-0.0 0.663 110.6 56.2 -56.5 -14.4 -0.1 -17.1 -6.7 41 41 A S T 3 S+ 0 0 84 1,-0.1 -1,-0.3 2,-0.0 -3,-0.0 0.852 96.5 67.8 -85.8 -39.5 -1.4 -19.2 -3.8 42 42 A V <> - 0 0 20 -3,-0.7 4,-1.1 1,-0.2 -3,-0.4 -0.735 62.8-164.4 -88.3 122.5 -3.0 -16.4 -1.9 43 43 A P H > S+ 0 0 77 0, 0.0 4,-1.6 0, 0.0 5,-0.2 0.909 84.0 65.5 -69.8 -44.3 -6.0 -14.8 -3.6 44 44 A M H >> S+ 0 0 1 1,-0.2 4,-2.0 2,-0.2 3,-0.6 0.915 101.2 50.4 -43.6 -55.9 -6.1 -11.7 -1.4 45 45 A C H 3> S+ 0 0 0 1,-0.2 4,-2.3 2,-0.2 3,-0.4 0.945 101.2 61.2 -48.9 -58.5 -2.8 -10.6 -2.9 46 46 A L H 3X S+ 0 0 90 -4,-1.1 4,-1.1 -7,-0.4 -1,-0.2 0.850 109.1 44.1 -36.5 -48.0 -3.9 -11.1 -6.5 47 47 A V H S- 0 0 11 -16,-1.8 4,-2.0 -18,-1.3 6,-0.1 0.034 83.6 -94.1 110.8 141.0 -3.1 -10.3 7.4 99 99 A I T 4>S+ 0 0 64 -18,-0.5 5,-0.6 1,-0.2 -1,-0.1 0.911 127.3 42.9 -50.6 -48.1 -6.0 -10.4 5.0 100 100 A I T >45S+ 0 0 143 1,-0.2 3,-2.7 2,-0.2 -1,-0.2 0.953 110.5 53.9 -64.4 -51.6 -8.1 -8.3 7.3 101 101 A E T 345S+ 0 0 123 1,-0.3 -1,-0.2 -4,-0.3 -2,-0.2 0.794 109.0 52.1 -53.7 -28.8 -5.3 -5.8 8.1 102 102 A C T 3<5S- 0 0 0 -4,-2.0 2,-0.7 -20,-0.1 -1,-0.3 0.069 132.1 -94.0 -96.0 23.3 -5.0 -5.4 4.4 103 103 A G T < 5 - 0 0 20 -3,-2.7 3,-0.2 -5,-0.1 2,-0.2 -0.385 64.7-104.1 98.7 -55.9 -8.7 -4.7 4.0 104 104 A G > < - 0 0 5 -2,-0.7 3,-2.9 -5,-0.6 -4,-0.1 -0.458 45.1 -57.2 119.7 167.0 -9.8 -8.2 3.2 105 105 A I T 3 S+ 0 0 110 1,-0.3 -1,-0.1 -2,-0.2 -5,-0.1 0.664 137.9 52.6 -55.3 -14.5 -11.0 -10.3 0.3 106 106 A N T 3 S+ 0 0 109 -3,-0.2 -1,-0.3 2,-0.0 2,-0.2 0.048 79.9 143.6-109.4 23.3 -13.6 -7.6 -0.1 107 107 A L < - 0 0 10 -3,-2.9 2,-0.1 -5,-0.1 -3,-0.1 -0.444 40.5-141.8 -67.3 132.1 -11.1 -4.7 -0.1 108 108 A K > - 0 0 139 -2,-0.2 4,-1.6 1,-0.1 5,-0.2 -0.456 21.9-111.7 -91.4 166.5 -12.1 -1.9 -2.5 109 109 A L H > S+ 0 0 70 1,-0.2 4,-1.1 2,-0.2 -1,-0.1 0.792 120.1 46.0 -66.8 -27.9 -9.8 0.2 -4.7 110 110 A E H > S+ 0 0 112 2,-0.2 4,-1.0 3,-0.1 -1,-0.2 0.896 104.4 59.9 -80.9 -44.2 -10.6 3.2 -2.5 111 111 A E H >> S+ 0 0 80 1,-0.2 4,-1.6 2,-0.2 3,-1.0 0.932 112.7 38.5 -48.6 -54.7 -10.1 1.5 0.8 112 112 A L H 3X S+ 0 0 3 -4,-1.6 4,-1.7 1,-0.3 5,-0.3 0.896 105.4 67.0 -64.9 -41.3 -6.5 0.6 0.0 113 113 A E H 3< S+ 0 0 17 -4,-1.1 4,-0.4 -5,-0.2 -1,-0.3 0.721 106.5 45.4 -52.5 -20.5 -6.0 3.9 -1.7 114 114 A W H XX S+ 0 0 60 -4,-1.0 4,-2.8 -3,-1.0 3,-1.0 0.908 100.4 62.5 -88.8 -52.5 -6.4 5.3 1.9 115 115 A K H 3X S+ 0 0 20 -4,-1.6 4,-0.9 1,-0.3 -2,-0.2 0.878 109.3 44.1 -38.9 -51.9 -4.2 2.9 3.9 116 116 A L H 3X>S+ 0 0 2 -4,-1.7 5,-2.2 2,-0.2 4,-1.2 0.822 115.5 50.6 -65.5 -31.4 -1.2 4.1 1.9 117 117 A S H X45S+ 0 0 15 -3,-1.0 3,-1.1 -4,-0.4 -2,-0.2 0.978 102.5 55.1 -70.5 -58.3 -2.4 7.7 2.3 118 118 A E H 3<5S+ 0 0 84 -4,-2.8 16,-0.5 1,-0.3 15,-0.3 0.752 110.1 52.5 -47.1 -24.7 -3.0 7.7 6.1 119 119 A V H 3<5S- 0 0 14 -4,-0.9 -1,-0.3 -5,-0.4 -2,-0.2 0.848 121.8-107.3 -81.4 -37.2 0.7 6.6 6.2 120 120 A G T <<5S+ 0 0 19 -4,-1.2 -3,-0.2 -3,-1.1 -2,-0.1 0.385 90.4 110.3 123.2 1.3 2.0 9.4 4.0 121 121 A A S