==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 15-DEC-05 2DBD . COMPND 2 MOLECULE: CASPASE RECRUITMENT DOMAIN PROTEIN 4; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.SAITO,M.INOUE,S.KOSHIBA,T.KIGAWA,S.YOKOYAMA,RIKEN . 107 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7176.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 65.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 54 50.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 2 1 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 141 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 84.9 -5.4 19.3 30.1 2 2 A S - 0 0 118 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.857 360.0-175.4-130.5 165.4 -7.4 18.7 26.9 3 3 A S - 0 0 128 -2,-0.3 2,-0.1 0, 0.0 0, 0.0 -0.989 11.1-143.2-158.5 154.7 -7.1 16.7 23.7 4 4 A G - 0 0 78 -2,-0.3 2,-0.2 1,-0.1 0, 0.0 -0.308 24.7 -99.4-108.3-166.6 -8.8 16.1 20.4 5 5 A S - 0 0 135 -2,-0.1 2,-0.2 1,-0.1 -1,-0.1 -0.449 30.1-112.9-107.9-177.3 -9.5 13.2 18.1 6 6 A S + 0 0 96 -2,-0.2 -1,-0.1 1,-0.1 2,-0.0 -0.669 26.2 173.5-114.0 170.1 -7.8 11.9 14.9 7 7 A G + 0 0 44 -2,-0.2 5,-0.2 0, 0.0 -1,-0.1 0.186 14.8 157.1-136.2-102.0 -9.0 11.6 11.2 8 8 A H > - 0 0 68 3,-0.1 4,-3.6 1,-0.1 5,-0.4 0.995 28.0-156.7 60.6 77.7 -7.0 10.6 8.2 9 9 A P T 4 S+ 0 0 95 0, 0.0 4,-0.4 0, 0.0 -1,-0.1 0.744 95.4 41.5 -55.3 -24.0 -9.8 9.5 5.8 10 10 A H T > S+ 0 0 38 2,-0.1 4,-0.8 3,-0.1 -2,-0.1 0.853 117.3 43.8 -91.3 -42.6 -7.1 7.4 4.0 11 11 A I H > S+ 0 0 9 1,-0.2 4,-1.9 2,-0.2 3,-0.4 0.871 111.7 54.4 -70.6 -38.0 -5.2 6.1 7.0 12 12 A Q H X S+ 0 0 100 -4,-3.6 4,-3.2 1,-0.2 5,-0.3 0.850 102.3 58.3 -64.4 -35.0 -8.4 5.3 8.9 13 13 A L H > S+ 0 0 40 -4,-0.4 4,-1.6 -5,-0.4 -1,-0.2 0.822 107.5 47.7 -64.4 -31.5 -9.6 3.2 5.9 14 14 A L H < S+ 0 0 0 -4,-0.8 -2,-0.2 -3,-0.4 -1,-0.2 0.886 116.0 42.3 -76.6 -41.0 -6.5 1.0 6.3 15 15 A K H >< S+ 0 0 105 -4,-1.9 3,-1.3 2,-0.2 4,-0.3 0.921 115.6 48.8 -71.4 -45.6 -6.8 0.5 10.0 16 16 A S H 3< S+ 0 0 71 -4,-3.2 3,-0.4 1,-0.3 -2,-0.2 0.936 124.3 30.9 -59.8 -48.9 -10.6 -0.0 10.0 17 17 A N T 3X S+ 0 0 37 -4,-1.6 4,-2.7 -5,-0.3 -1,-0.3 -0.060 85.5 117.0-100.8 31.4 -10.3 -2.6 7.2 18 18 A R H <> S+ 0 0 73 -3,-1.3 4,-0.8 1,-0.2 -1,-0.2 0.816 79.6 45.9 -67.1 -30.8 -6.9 -3.8 8.3 19 19 A E H > S+ 0 0 145 -3,-0.4 4,-0.5 -4,-0.3 -1,-0.2 0.790 115.1 46.4 -81.5 -30.2 -8.3 -7.2 9.0 20 20 A L H >> S+ 0 0 59 2,-0.2 4,-2.3 1,-0.2 3,-0.5 0.851 107.6 55.9 -79.5 -37.0 -10.2 -7.4 5.7 21 21 A L H 3X S+ 0 0 0 -4,-2.7 4,-2.3 1,-0.2 -1,-0.2 0.827 104.8 54.2 -64.3 -32.1 -7.3 -6.1 3.6 22 22 A V H 3< S+ 0 0 22 -4,-0.8 -1,-0.2 -5,-0.2 -2,-0.2 0.747 113.7 41.7 -73.6 -24.3 -5.2 -9.0 4.9 23 23 A T H << S+ 0 0 100 -4,-0.5 -2,-0.2 -3,-0.5 -1,-0.2 0.751 123.2 37.5 -92.3 -29.3 -7.8 -11.5 3.8 24 24 A H H < S+ 0 0 32 -4,-2.3 66,-0.3 66,-0.1 67,-0.2 0.918 104.4 72.3 -86.9 -52.5 -8.6 -9.9 0.4 25 25 A I < + 0 0 6 -4,-2.3 34,-0.1 -5,-0.2 3,-0.1 -0.373 46.0 157.8 -66.8 142.4 -5.1 -8.7 -0.6 26 26 A R + 0 0 169 1,-0.2 2,-0.7 -2,-0.1 -1,-0.2 0.581 52.9 73.9-130.9 -46.5 -2.7 -11.4 -1.7 27 27 A N + 0 0 84 1,-0.2 4,-0.3 2,-0.1 -1,-0.2 -0.676 44.2 156.5 -81.1 114.6 0.0 -9.9 -3.8 28 28 A T > + 0 0 2 -2,-0.7 4,-1.4 2,-0.1 -1,-0.2 0.724 67.1 63.2-105.8 -33.8 2.4 -7.8 -1.7 29 29 A Q H > S+ 0 0 120 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.873 101.5 54.0 -59.8 -38.4 5.5 -7.8 -3.9 30 30 A C H > S+ 0 0 57 1,-0.2 4,-2.0 2,-0.2 5,-0.2 0.894 104.6 53.7 -63.6 -41.1 3.6 -5.9 -6.5 31 31 A L H > S+ 0 0 4 -4,-0.3 4,-1.1 1,-0.2 -1,-0.2 0.824 114.0 43.0 -63.2 -31.8 2.6 -3.2 -4.0 32 32 A V H X S+ 0 0 6 -4,-1.4 4,-2.9 2,-0.2 9,-0.2 0.869 109.3 55.6 -81.4 -40.2 6.3 -2.8 -3.2 33 33 A D H X S+ 0 0 99 -4,-2.7 4,-1.3 1,-0.2 -2,-0.2 0.866 113.1 42.9 -60.3 -37.3 7.6 -2.9 -6.7 34 34 A N H X S+ 0 0 58 -4,-2.0 4,-1.3 2,-0.2 -1,-0.2 0.842 116.1 47.4 -77.4 -35.3 5.2 -0.0 -7.6 35 35 A L H <>S+ 0 0 0 -4,-1.1 5,-2.8 -5,-0.2 6,-0.9 0.816 108.6 55.8 -74.9 -31.7 6.0 1.9 -4.5 36 36 A L H ><5S+ 0 0 75 -4,-2.9 3,-0.8 3,-0.2 -2,-0.2 0.899 109.8 44.7 -67.2 -41.9 9.8 1.4 -4.9 37 37 A K H 3<5S+ 0 0 191 -4,-1.3 -1,-0.2 1,-0.2 -2,-0.2 0.814 111.4 53.8 -71.8 -31.0 9.7 3.0 -8.4 38 38 A N T 3<5S- 0 0 78 -4,-1.3 -1,-0.2 -5,-0.1 -2,-0.2 0.439 117.1-115.1 -82.6 0.1 7.5 5.8 -7.2 39 39 A D T < 5S+ 0 0 145 -3,-0.8 -3,-0.2 -4,-0.2 -2,-0.1 0.961 84.9 112.9 65.0 53.0 10.0 6.5 -4.5 40 40 A Y < + 0 0 65 -5,-2.8 2,-0.5 1,-0.3 -4,-0.2 0.673 64.9 50.8-119.5 -42.0 7.7 5.7 -1.6 41 41 A F S S- 0 0 7 -6,-0.9 -1,-0.3 -9,-0.2 -2,-0.2 -0.906 73.6-150.2-107.6 123.1 9.2 2.5 -0.0 42 42 A S > - 0 0 56 -2,-0.5 4,-2.4 -3,-0.1 3,-0.3 -0.268 32.5-100.8 -82.4 172.5 12.9 2.5 0.9 43 43 A A H > S+ 0 0 81 1,-0.2 4,-1.3 2,-0.2 -1,-0.1 0.834 124.9 53.3 -62.3 -33.0 15.2 -0.5 1.0 44 44 A E H > S+ 0 0 132 2,-0.2 4,-0.6 1,-0.2 -1,-0.2 0.817 109.7 48.5 -71.7 -31.4 14.8 -0.7 4.7 45 45 A D H >> S+ 0 0 24 -3,-0.3 4,-1.4 2,-0.2 3,-1.2 0.952 111.0 46.8 -73.1 -52.4 11.0 -0.7 4.4 46 46 A A H 3X S+ 0 0 14 -4,-2.4 4,-2.3 1,-0.3 5,-0.3 0.810 104.5 64.5 -59.7 -30.5 10.8 -3.5 1.8 47 47 A E H 3X S+ 0 0 147 -4,-1.3 4,-1.0 -5,-0.3 -1,-0.3 0.818 102.0 49.4 -62.9 -31.1 13.3 -5.5 3.8 48 48 A I H < S+ 0 0 1 -4,-1.4 3,-1.8 1,-0.2 -2,-0.2 0.972 114.2 42.3 -61.1 -57.3 7.8 -6.8 4.3 50 50 A C H 3< S+ 0 0 67 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.815 103.1 70.2 -60.0 -30.7 9.8 -9.6 2.6 51 51 A A H 3< S+ 0 0 78 -4,-1.0 -1,-0.3 -5,-0.3 -2,-0.2 0.736 77.6 109.4 -59.4 -22.3 11.1 -10.5 6.1 52 52 A C S << S- 0 0 17 -3,-1.8 3,-0.0 -4,-0.6 6,-0.0 -0.141 72.5-134.8 -54.7 150.5 7.6 -11.7 6.9 53 53 A P S S+ 0 0 104 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 0.846 82.0 7.7 -77.3 -36.2 7.1 -15.5 7.2 54 54 A T S > S- 0 0 74 1,-0.1 4,-1.1 0, 0.0 3,-0.1 -0.745 81.6 -97.7-135.2-177.4 3.9 -15.6 5.2 55 55 A Q H >> S+ 0 0 67 -2,-0.2 4,-2.3 2,-0.2 3,-0.8 0.956 116.7 58.5 -70.2 -52.3 1.7 -13.4 2.9 56 56 A P H 3> S+ 0 0 66 0, 0.0 4,-1.1 0, 0.0 -1,-0.2 0.766 109.0 49.2 -48.9 -27.0 -0.9 -12.5 5.6 57 57 A D H 3> S+ 0 0 68 2,-0.2 4,-1.8 3,-0.1 -2,-0.2 0.829 107.2 53.3 -82.4 -35.1 2.0 -11.1 7.5 58 58 A K H X S+ 0 0 24 -4,-1.7 4,-1.6 2,-0.2 3,-0.7 0.956 109.6 47.6 -68.1 -52.5 4.3 1.0 7.3 66 66 A V H 3X S+ 0 0 0 -4,-2.8 4,-1.8 1,-0.3 8,-0.3 0.875 110.0 54.1 -56.7 -39.6 2.2 3.2 5.0 67 67 A Q H 3< S+ 0 0 21 -4,-1.9 -1,-0.3 -5,-0.2 -2,-0.2 0.796 105.5 54.4 -65.8 -28.5 0.2 4.4 8.1 68 68 A S H << S+ 0 0 103 -4,-1.0 -1,-0.2 -3,-0.7 -2,-0.2 0.844 107.2 51.1 -73.8 -34.7 3.5 5.4 9.7 69 69 A K H < S- 0 0 73 -4,-1.6 2,-0.3 1,-0.2 -2,-0.2 0.995 108.4-120.1 -65.8 -65.3 4.5 7.6 6.7 70 70 A G X - 0 0 19 -4,-1.8 4,-2.2 1,-0.1 3,-0.4 -0.950 37.6 -49.7 151.2-169.9 1.3 9.6 6.4 71 71 A E H > S+ 0 0 92 -2,-0.3 4,-2.3 1,-0.2 5,-0.2 0.772 121.4 70.4 -68.6 -26.4 -1.6 10.5 4.1 72 72 A E H > S+ 0 0 163 1,-0.2 4,-0.7 2,-0.2 -1,-0.2 0.922 112.9 26.3 -56.4 -47.4 0.9 11.3 1.3 73 73 A V H > S+ 0 0 12 -3,-0.4 4,-3.3 -7,-0.2 5,-0.3 0.806 116.7 62.4 -85.6 -33.4 1.7 7.6 0.9 74 74 A S H X S+ 0 0 0 -4,-2.2 4,-1.9 -8,-0.3 -2,-0.2 0.843 102.9 52.0 -60.6 -34.2 -1.6 6.3 2.2 75 75 A E H X S+ 0 0 101 -4,-2.3 4,-1.1 2,-0.2 -1,-0.2 0.871 114.5 41.5 -70.4 -38.0 -3.3 8.1 -0.7 76 76 A F H X S+ 0 0 42 -4,-0.7 4,-1.9 -5,-0.2 -2,-0.2 0.897 113.8 51.6 -75.9 -42.8 -1.0 6.4 -3.2 77 77 A F H X S+ 0 0 1 -4,-3.3 4,-0.7 1,-0.2 -2,-0.2 0.901 113.0 45.4 -60.8 -42.5 -1.1 3.0 -1.6 78 78 A L H X S+ 0 0 2 -4,-1.9 4,-0.6 -5,-0.3 3,-0.3 0.809 108.0 59.0 -71.1 -30.5 -4.9 3.0 -1.5 79 79 A Y H >X S+ 0 0 121 -4,-1.1 4,-2.0 1,-0.2 3,-1.3 0.896 98.4 57.6 -65.5 -41.2 -5.0 4.2 -5.1 80 80 A L H 3X S+ 0 0 3 -4,-1.9 4,-1.8 1,-0.3 -1,-0.2 0.809 97.7 63.1 -59.4 -30.2 -3.1 1.2 -6.4 81 81 A L H 3X S+ 0 0 5 -4,-0.7 4,-0.5 -3,-0.3 -1,-0.3 0.795 108.7 41.2 -65.4 -28.7 -5.8 -1.0 -4.9 82 82 A Q H < S+ 0 0 43 -4,-1.8 3,-3.0 -5,-0.3 -1,-0.3 0.688 91.4 85.7 -91.3 -22.3 -5.2 -2.8 -9.8 85 85 A A H >< S+ 0 0 8 -4,-0.5 3,-1.7 -3,-0.4 -2,-0.2 0.778 77.1 71.7 -49.1 -28.3 -8.7 -3.9 -8.6 86 86 A D T 3< S+ 0 0 130 -4,-0.7 -1,-0.3 1,-0.3 -2,-0.1 0.805 101.6 43.1 -59.3 -29.5 -9.4 -4.6 -12.3 87 87 A A T < S+ 0 0 92 -3,-3.0 -1,-0.3 -4,-0.1 2,-0.3 -0.186 104.6 87.9-109.7 39.2 -7.0 -7.6 -12.0 88 88 A Y < - 0 0 37 -3,-1.7 -63,-0.1 3,-0.2 -3,-0.0 -0.798 51.0-165.2-130.0 172.1 -8.3 -8.8 -8.7 89 89 A V S S+ 0 0 138 -2,-0.3 -1,-0.1 -65,-0.2 -65,-0.0 0.640 90.7 41.8-124.7 -44.8 -11.0 -11.2 -7.4 90 90 A D S S+ 0 0 67 -66,-0.3 2,-0.6 1,-0.1 4,-0.3 0.811 108.4 67.5 -76.8 -31.4 -11.4 -10.5 -3.6 91 91 A L S S+ 0 0 1 -67,-0.2 -3,-0.2 1,-0.1 -1,-0.1 -0.825 74.6 74.1 -96.2 117.6 -11.1 -6.7 -4.1 92 92 A R S > S+ 0 0 122 -2,-0.6 4,-1.2 -6,-0.0 -1,-0.1 -0.045 84.5 52.8-179.4 -61.4 -14.0 -5.2 -6.0 93 93 A P H > S+ 0 0 80 0, 0.0 4,-1.1 0, 0.0 5,-0.1 0.774 105.6 60.5 -67.1 -26.4 -17.3 -4.9 -3.9 94 94 A W H >> S+ 0 0 22 -4,-0.3 4,-2.7 2,-0.2 3,-0.9 0.959 102.5 48.1 -65.8 -52.8 -15.3 -3.1 -1.1 95 95 A L H 3> S+ 0 0 16 1,-0.3 4,-2.6 2,-0.2 5,-0.5 0.836 109.2 55.9 -57.2 -33.8 -14.2 -0.2 -3.3 96 96 A L H 3< S+ 0 0 145 -4,-1.2 -1,-0.3 2,-0.2 -2,-0.2 0.801 111.0 44.3 -69.3 -29.4 -17.8 0.1 -4.5 97 97 A E H << S+ 0 0 167 -4,-1.1 -2,-0.2 -3,-0.9 -1,-0.2 0.921 121.8 35.3 -80.3 -48.6 -19.0 0.5 -0.9 98 98 A I H < S- 0 0 54 -4,-2.7 -2,-0.2 -5,-0.1 -3,-0.2 0.840 99.0-145.2 -74.4 -34.5 -16.3 2.9 0.3 99 99 A G < + 0 0 45 -4,-2.6 -3,-0.2 -5,-0.4 -4,-0.1 0.966 25.3 178.1 65.7 89.3 -16.2 4.7 -3.0 100 100 A F + 0 0 43 -5,-0.5 2,-0.1 -22,-0.1 -4,-0.1 0.925 63.9 48.4 -85.8 -53.3 -12.7 5.9 -3.6 101 101 A S - 0 0 69 -6,-0.1 2,-0.3 -22,-0.0 -22,-0.0 -0.425 67.4-177.9 -86.2 163.4 -13.0 7.5 -7.1 102 102 A S + 0 0 105 -2,-0.1 -3,-0.0 2,-0.1 -2,-0.0 -0.988 35.5 43.9-157.5 158.9 -15.7 10.0 -8.1 103 103 A G S S- 0 0 57 -2,-0.3 -1,-0.1 2,-0.0 -2,-0.0 0.303 85.1 -66.8 81.4 147.2 -17.0 12.0 -11.0 104 104 A P - 0 0 125 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 0.231 35.9-130.4 -53.5-174.3 -17.5 10.9 -14.6 105 105 A S + 0 0 127 2,-0.0 2,-0.1 0, 0.0 -2,-0.0 -0.052 63.9 115.3-134.6 31.3 -14.6 9.9 -16.9 106 106 A S 0 0 120 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.315 360.0 360.0 -94.2-179.9 -15.4 11.9 -20.0 107 107 A G 0 0 150 -2,-0.1 -2,-0.0 0, 0.0 0, 0.0 -0.377 360.0 360.0 121.8 360.0 -13.4 14.7 -21.7