==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 05-NOV-99 1DCJ . COMPND 2 MOLECULE: YHHP PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR E.KATOH,T.HATTA,H.SHINDO,T.MIZUNO,T.YAMAZAKI . 81 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5112.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 60.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 14.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 19 23.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 246 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 114.4 -15.8 9.5 -5.5 2 2 A T - 0 0 122 1,-0.1 2,-0.9 2,-0.0 0, 0.0 -0.519 360.0-103.4 -85.9 156.9 -16.6 7.0 -2.7 3 3 A D + 0 0 137 1,-0.2 3,-0.4 -2,-0.2 -1,-0.1 -0.678 42.3 169.1 -82.3 109.4 -14.3 6.6 0.3 4 4 A L + 0 0 92 -2,-0.9 -1,-0.2 1,-0.2 61,-0.1 0.518 66.0 77.5 -96.7 -5.5 -12.4 3.3 -0.3 5 5 A F + 0 0 40 59,-0.1 -1,-0.2 61,-0.1 -2,-0.1 0.251 66.6 141.9 -86.9 16.5 -9.9 3.9 2.6 6 6 A S S S- 0 0 81 -3,-0.4 -2,-0.0 1,-0.2 34,-0.0 0.115 77.4 -41.1 -45.8 174.9 -12.6 2.9 5.1 7 7 A S S S- 0 0 122 2,-0.1 -1,-0.2 1,-0.0 31,-0.0 -0.213 78.3-151.5 -46.9 104.2 -11.3 0.9 8.1 8 8 A P - 0 0 31 0, 0.0 31,-0.1 0, 0.0 3,-0.1 -0.227 19.1-120.8 -75.2 167.6 -8.9 -1.4 6.2 9 9 A D S S+ 0 0 69 29,-0.4 2,-0.3 1,-0.1 30,-0.2 0.754 93.3 10.1 -83.2 -23.2 -8.0 -4.9 7.4 10 10 A H E -a 39 0A 63 28,-1.0 30,-2.6 2,-0.0 2,-0.3 -0.894 67.8-148.4-144.5 174.5 -4.3 -4.0 7.7 11 11 A T E -a 40 0A 90 -2,-0.3 2,-0.3 28,-0.3 30,-0.2 -0.972 2.1-158.9-145.2 161.3 -2.0 -0.9 7.5 12 12 A L E -a 41 0A 2 28,-1.5 30,-2.3 -2,-0.3 2,-0.3 -0.827 10.0-151.3-146.0 107.5 1.6 -0.1 6.4 13 13 A D + 0 0 94 -2,-0.3 30,-0.1 28,-0.2 12,-0.1 -0.566 25.8 161.5 -74.8 136.0 3.5 3.0 7.6 14 14 A A > + 0 0 0 -2,-0.3 31,-1.2 59,-0.1 30,-1.0 0.165 28.9 125.4-141.8 17.5 6.0 4.1 5.0 15 15 A L T 3 S+ 0 0 56 28,-0.3 3,-0.1 1,-0.3 28,-0.1 -0.679 93.7 8.2 -79.3 107.0 6.6 7.6 6.2 16 16 A G T 3 S+ 0 0 49 -2,-0.9 2,-0.3 1,-0.4 -1,-0.3 0.323 110.8 115.7 97.4 -6.3 10.4 7.6 6.5 17 17 A L < - 0 0 39 -3,-1.0 -1,-0.4 28,-0.1 2,-0.4 -0.683 45.2-172.9 -91.9 148.0 10.4 4.2 4.8 18 18 A R > - 0 0 161 -2,-0.3 3,-2.3 -3,-0.1 -3,-0.0 -0.995 32.6 -39.7-143.0 149.3 12.0 3.8 1.5 19 19 A C T 3 S+ 0 0 48 1,-0.4 29,-0.1 -2,-0.4 28,-0.0 -0.153 123.9 16.2 -47.0 141.8 12.3 1.1 -1.1 20 20 A P T 3> S+ 0 0 73 0, 0.0 4,-1.7 0, 0.0 -1,-0.4 -0.977 122.5 62.5 -88.9 3.7 12.7 -1.6 -0.7 21 21 A E H <> S+ 0 0 111 -3,-2.3 4,-1.8 2,-0.2 -2,-0.2 0.904 111.4 37.6 -52.7 -47.6 11.6 -1.2 3.0 22 22 A P H >> S+ 0 0 0 0, 0.0 4,-2.1 0, 0.0 3,-0.8 0.990 117.6 47.6 -70.3 -62.4 8.1 -0.0 2.3 23 23 A V H 3> S+ 0 0 22 1,-0.3 4,-0.8 2,-0.2 -2,-0.2 0.821 112.4 57.1 -47.6 -25.6 7.4 -2.3 -0.7 24 24 A M H 3X S+ 0 0 78 -4,-1.7 4,-2.2 2,-0.2 5,-0.3 0.916 101.1 52.3 -75.3 -42.0 8.9 -4.9 1.7 25 25 A M H - 0 0 132 -2,-0.1 3,-1.0 4,-0.1 2,-0.4 -0.961 25.9 -95.4-134.9 153.5 -5.8 -12.7 2.4 35 35 A P T 3 S+ 0 0 88 0, 0.0 45,-0.3 0, 0.0 44,-0.1 -0.513 114.2 34.2 -69.9 120.5 -7.6 -12.4 -1.0 36 36 A G T 3 S+ 0 0 57 43,-2.8 2,-0.2 -2,-0.4 44,-0.1 0.593 101.3 104.2 106.6 18.2 -10.7 -10.3 -0.4 37 37 A E < - 0 0 57 42,-1.2 -1,-0.3 -3,-1.0 2,-0.3 -0.568 59.8-130.6-118.8-175.1 -9.0 -8.1 2.2 38 38 A T - 0 0 25 40,-0.3 -28,-1.0 -2,-0.2 -29,-0.4 -0.970 11.0-166.6-140.2 155.9 -7.7 -4.5 2.3 39 39 A L E -a 10 0A 1 -2,-0.3 38,-1.5 38,-0.2 2,-0.3 -0.922 11.5-150.6-144.8 117.4 -4.5 -2.8 3.5 40 40 A L E -aB 11 76A 30 -30,-2.6 -28,-1.5 -2,-0.3 2,-0.4 -0.649 19.1-170.5 -86.8 142.0 -4.0 1.0 3.9 41 41 A I E -aB 12 75A 0 34,-0.8 34,-1.9 -2,-0.3 2,-0.3 -0.976 10.4-164.1-137.8 129.8 -0.5 2.2 3.4 42 42 A I E + B 0 74A 37 -30,-2.3 2,-0.3 -2,-0.4 32,-0.2 -0.724 11.9 176.7-105.9 160.0 1.1 5.6 4.0 43 43 A A E + B 0 73A 0 30,-2.1 30,-2.4 -2,-0.3 -28,-0.3 -0.855 25.5 175.9-163.0 126.7 4.4 6.8 2.6 44 44 A D + 0 0 65 -30,-1.0 -29,-0.2 -2,-0.3 -1,-0.1 0.702 63.8 98.7-102.7 -24.3 6.3 10.0 2.7 45 45 A D S >> S- 0 0 17 -31,-1.2 4,-0.7 -28,-0.3 3,-0.7 -0.338 74.6-138.7 -60.4 142.0 9.2 8.5 0.8 46 46 A P T 34 S+ 0 0 93 0, 0.0 4,-0.4 0, 0.0 -1,-0.2 0.664 101.1 58.5 -77.9 -18.8 9.0 9.5 -2.9 47 47 A A T 3> S+ 0 0 33 -30,-0.2 4,-1.6 1,-0.2 5,-0.4 0.500 96.0 64.6 -89.5 -2.9 10.0 6.0 -3.9 48 48 A T H <> S+ 0 0 0 -3,-0.7 4,-1.3 3,-0.2 6,-0.2 0.873 91.9 58.8 -87.4 -39.5 7.1 4.4 -2.1 49 49 A T H < S+ 0 0 37 -4,-0.7 5,-0.2 1,-0.2 -1,-0.1 0.859 121.3 30.4 -57.1 -31.5 4.3 6.0 -4.2 50 50 A R H > S+ 0 0 173 -4,-0.4 4,-0.8 3,-0.1 -1,-0.2 0.809 130.3 34.1 -96.7 -37.6 5.9 4.3 -7.2 51 51 A D H X S+ 0 0 64 -4,-1.6 4,-1.8 3,-0.2 -3,-0.2 0.898 112.0 55.2 -88.2 -45.0 7.5 1.1 -5.7 52 52 A I H X S+ 0 0 0 -4,-1.3 4,-1.8 -5,-0.4 -3,-0.2 0.960 121.1 31.6 -54.4 -51.8 5.0 0.1 -2.9 53 53 A P H > S+ 0 0 18 0, 0.0 4,-2.6 0, 0.0 5,-0.4 0.946 113.0 59.7 -72.7 -49.4 2.1 0.0 -5.3 54 54 A G H X S+ 0 0 39 -4,-0.8 4,-0.9 1,-0.2 -2,-0.2 0.844 108.6 51.5 -49.8 -25.0 4.1 -1.1 -8.4 55 55 A F H >X S+ 0 0 18 -4,-1.8 4,-1.7 2,-0.2 3,-0.7 0.959 105.4 50.1 -77.3 -52.3 4.8 -4.0 -6.1 56 56 A C H 3<>S+ 0 0 1 -4,-1.8 5,-2.7 1,-0.3 4,-0.3 0.900 109.9 53.3 -54.4 -37.4 1.2 -4.8 -5.2 57 57 A T H ><5S+ 0 0 100 -4,-2.6 3,-0.7 1,-0.2 -1,-0.3 0.865 106.6 52.7 -66.7 -32.9 0.4 -4.8 -8.9 58 58 A F H <<5S+ 0 0 187 -4,-0.9 -1,-0.2 -3,-0.7 -2,-0.2 0.808 107.9 49.8 -73.9 -28.3 3.2 -7.3 -9.6 59 59 A M T 3<5S- 0 0 71 -4,-1.7 -1,-0.2 -3,-0.2 -2,-0.2 0.394 122.8-100.1 -93.1 8.3 2.0 -9.8 -7.0 60 60 A E T < 5S+ 0 0 125 -3,-0.7 -3,-0.2 -4,-0.3 2,-0.1 0.767 79.3 136.2 83.2 25.8 -1.6 -9.8 -8.2 61 61 A H < - 0 0 14 -5,-2.7 2,-0.4 -6,-0.2 -1,-0.2 -0.461 50.0-121.3 -97.0 173.8 -2.9 -7.4 -5.5 62 62 A E E -C 78 0A 110 16,-1.7 16,-1.3 -2,-0.1 2,-1.1 -0.956 5.9-134.4-123.0 138.4 -5.3 -4.5 -6.1 63 63 A L E -C 77 0A 53 -2,-0.4 14,-0.3 14,-0.3 3,-0.2 -0.713 25.9-175.9 -83.9 101.4 -4.7 -0.8 -5.4 64 64 A V E - 0 0 26 -2,-1.1 2,-0.3 12,-1.1 -1,-0.2 0.965 65.3 -5.8 -70.8 -48.0 -8.1 -0.1 -3.8 65 65 A A E -C 76 0A 14 11,-0.6 11,-3.3 -3,-0.2 -1,-0.2 -0.958 65.1-150.4-149.1 130.0 -7.6 3.7 -3.4 66 66 A K E -C 75 0A 139 -2,-0.3 2,-0.4 9,-0.3 9,-0.3 -0.646 3.7-158.5 -98.6 159.8 -4.6 6.0 -4.0 67 67 A E E +C 74 0A 53 7,-2.3 7,-1.8 -2,-0.2 3,-0.1 -0.923 31.6 143.5-138.1 111.8 -3.7 9.2 -2.2 68 68 A T + 0 0 100 -2,-0.4 3,-0.2 5,-0.2 5,-0.1 -0.064 31.6 121.2-136.6 32.7 -1.4 11.9 -3.7 69 69 A D S S- 0 0 140 1,-0.3 2,-0.1 3,-0.2 -1,-0.1 0.436 96.2 -45.3 -78.6 5.1 -3.1 15.1 -2.5 70 70 A G S S- 0 0 43 -3,-0.1 -1,-0.3 2,-0.0 -2,-0.0 -0.096 94.7 -25.9 132.1 126.1 0.2 15.9 -0.8 71 71 A L S S+ 0 0 99 -3,-0.2 -27,-0.1 -2,-0.1 2,-0.1 0.081 105.5 56.0 -35.1 146.9 2.6 13.9 1.2 72 72 A P S S- 0 0 40 0, 0.0 -28,-0.3 0, 0.0 -3,-0.2 0.505 83.6-149.7 -81.7 148.7 2.5 11.7 2.9 73 73 A Y E -B 43 0A 44 -30,-2.4 -30,-2.1 -28,-0.2 2,-0.3 -0.286 11.5-163.3 -71.6 165.1 0.9 9.6 0.1 74 74 A R E -BC 42 67A 70 -7,-1.8 -7,-2.3 -32,-0.2 2,-0.3 -0.994 10.1-178.8-148.4 151.8 -1.5 6.8 0.9 75 75 A Y E -BC 41 66A 6 -34,-1.9 -34,-0.8 -2,-0.3 -9,-0.3 -0.924 17.0-145.7-153.4 126.5 -2.8 3.9 -1.1 76 76 A L E -BC 40 65A 2 -11,-3.3 -12,-1.1 -2,-0.3 -11,-0.6 -0.644 16.7-166.7 -88.9 152.9 -5.2 1.2 -0.1 77 77 A I E - C 0 63A 2 -38,-1.5 2,-0.7 -14,-0.3 -14,-0.3 -0.839 14.8-146.3-143.8 107.2 -4.5 -2.2 -1.6 78 78 A R E - C 0 62A 94 -16,-1.3 -16,-1.7 -2,-0.4 -40,-0.3 -0.561 28.5-127.8 -72.2 111.7 -7.1 -5.1 -1.5 79 79 A K + 0 0 34 -2,-0.7 -43,-2.8 -18,-0.2 -42,-1.2 -0.359 59.2 113.3 -58.8 132.6 -5.0 -8.2 -1.1 80 80 A G 0 0 15 -45,-0.3 -47,-0.0 -44,-0.1 -42,-0.0 -0.971 360.0 360.0-178.0-172.5 -6.0 -10.7 -3.9 81 81 A G 0 0 91 -2,-0.3 -1,-0.1 -20,-0.1 -20,-0.1 0.234 360.0 360.0-170.1 360.0 -4.8 -12.5 -7.0