==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 11-JAN-06 2DCO . COMPND 2 MOLECULE: S1P4 FIRST EXTRACELLULAR LOOP PEPTIDOMIMETIC; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.C.T.PHAM,R.W.KRIWACKI,A.L.PARRILL . 34 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2897.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 67.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 29.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 26.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 90 0, 0.0 7,-0.2 0, 0.0 4,-0.1 0.000 360.0 360.0 360.0-141.5 4.1 10.5 0.2 2 2 A S > - 0 0 58 1,-0.2 3,-2.7 5,-0.2 4,-0.1 0.607 360.0-158.8 56.7 31.5 6.1 8.1 -2.1 3 3 A Y G >> S- 0 0 181 1,-0.3 3,-2.7 2,-0.2 4,-1.1 -0.217 82.8 -31.3 -40.0 103.8 9.1 7.1 0.2 4 4 A D G 34 S- 0 0 133 1,-0.3 -1,-0.3 2,-0.2 -2,-0.1 0.778 113.4 -68.6 34.0 42.3 11.6 6.0 -2.5 5 5 A A G <4 S+ 0 0 73 -3,-2.7 -1,-0.3 1,-0.1 -2,-0.2 0.445 124.4 98.5 58.7 9.1 8.4 4.9 -4.5 6 6 A Y T X> S+ 0 0 103 -3,-2.7 3,-1.3 -4,-0.1 4,-0.6 0.962 84.8 37.6 -80.8 -59.3 7.7 2.1 -1.9 7 7 A R H 3X S+ 0 0 86 -4,-1.1 4,-1.4 1,-0.3 5,-0.2 0.554 89.6 95.4 -76.5 -1.7 5.0 3.7 0.3 8 8 A T H 34 S+ 0 0 70 -5,-0.3 -1,-0.3 2,-0.2 4,-0.2 0.746 95.2 39.2 -56.4 -27.1 3.5 5.4 -2.8 9 9 A D H X> S+ 0 0 31 -3,-1.3 3,-2.3 -4,-0.2 4,-1.0 0.913 109.7 60.3 -73.2 -60.7 1.2 2.3 -2.7 10 10 A a H 3X S+ 0 0 22 -4,-0.6 4,-0.8 1,-0.3 -2,-0.2 0.489 90.4 68.2 -56.2 -15.1 0.9 2.2 1.2 11 11 A E H 3X S+ 0 0 77 -4,-1.4 4,-1.1 2,-0.2 5,-0.4 0.844 102.5 47.3 -74.3 -28.4 -0.7 5.8 1.4 12 12 A E H X4>S+ 0 0 68 -3,-2.3 5,-2.2 -4,-0.2 3,-0.6 0.939 109.7 53.6 -65.4 -45.2 -3.8 4.3 -0.3 13 13 A L H 3<5S+ 0 0 15 -4,-1.0 -2,-0.2 1,-0.2 -1,-0.2 0.746 107.6 52.1 -64.9 -22.8 -3.6 1.4 2.1 14 14 A S H 3<5S- 0 0 75 -4,-0.8 -1,-0.2 3,-0.1 -2,-0.2 0.821 137.1 -6.0 -75.9 -32.5 -3.6 4.0 5.0 15 15 A G T X<5S+ 0 0 40 -4,-1.1 3,-1.2 -3,-0.6 -3,-0.2 0.699 129.1 53.5-132.7 -60.5 -6.8 5.9 3.7 16 16 A A G > 5S+ 0 0 28 -5,-0.4 3,-2.9 1,-0.2 -3,-0.2 0.649 81.8 99.3 -62.1 -15.3 -8.3 4.8 0.3 17 17 A R G >>< + 0 0 125 -5,-2.2 3,-2.3 1,-0.3 4,-0.7 0.780 67.2 70.8 -34.7 -41.8 -8.4 1.2 1.8 18 18 A T G <4 S+ 0 0 93 -3,-1.2 -1,-0.3 1,-0.3 -2,-0.1 0.680 110.1 32.2 -56.1 -20.8 -12.1 1.7 2.6 19 19 A F G <4 S+ 0 0 172 -3,-2.9 -1,-0.3 -4,-0.1 -2,-0.2 0.080 134.3 29.6-122.1 15.0 -12.8 1.5 -1.2 20 20 A R T <4 + 0 0 101 -3,-2.3 2,-1.4 -4,-0.1 -3,-0.2 0.479 57.0 150.8-130.2 -75.2 -9.9 -1.0 -2.0 21 21 A L S < S+ 0 0 128 -4,-0.7 -4,-0.1 1,-0.2 -3,-0.1 0.140 88.7 22.8 36.4 -5.0 -9.0 -3.5 0.9 22 22 A A S S+ 0 0 64 -2,-1.4 -1,-0.2 -5,-0.1 3,-0.1 0.519 112.5 59.2-137.5 -50.8 -7.9 -6.1 -1.7 23 23 A P S S+ 0 0 111 0, 0.0 -2,-0.1 0, 0.0 3,-0.1 0.709 125.4 25.8 -58.1 -23.1 -6.9 -4.6 -5.2 24 24 A A S > S+ 0 0 14 -7,-0.1 2,-2.5 1,-0.1 3,-0.8 0.526 97.4 90.2-114.4 -14.0 -4.2 -2.5 -3.5 25 25 A Q T 3 S+ 0 0 56 1,-0.2 -1,-0.1 2,-0.1 -15,-0.0 -0.305 74.1 83.3 -76.2 55.8 -3.5 -4.8 -0.4 26 26 A W T 3 S+ 0 0 183 -2,-2.5 -1,-0.2 -3,-0.1 -2,-0.0 0.228 88.6 34.2-146.2 2.0 -0.9 -6.4 -2.6 27 27 A S S X>>S+ 0 0 29 -3,-0.8 4,-3.2 3,-0.1 3,-2.7 0.580 104.8 49.9-133.4 -68.4 2.3 -4.2 -2.3 28 28 A a H 3>5S+ 0 0 6 -4,-0.4 6,-2.8 1,-0.3 4,-0.7 0.871 111.5 53.8 -47.4 -46.0 3.2 -2.4 1.0 29 29 A R H 345S+ 0 0 148 4,-0.3 -1,-0.3 1,-0.1 -4,-0.1 0.464 131.0 10.0 -61.9 -10.5 2.7 -5.7 3.0 30 30 A E H <45S+ 0 0 84 -3,-2.7 -2,-0.2 3,-0.1 -1,-0.1 0.550 111.5 70.5-151.4 -35.3 5.2 -7.6 0.7 31 31 A T H <5S- 0 0 87 -4,-3.2 -3,-0.2 1,-0.2 -2,-0.1 0.820 137.4 -3.0 -59.5 -33.0 7.2 -5.3 -1.8 32 32 A F S <